Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 3.5e-141 505.0 259 100.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.9e-81 304.7 203 77.3
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.5e-80 303.5 204 77.5
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.5e-80 303.5 206 76.7
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 3.4e-80 302.4 201 78.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.9e-79 298.5 203 75.4
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 4.9e-79 298.5 203 75.4
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.1e-78 297.4 203 74.9
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.4e-78 296.2 201 75.6
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 2.4e-78 296.2 201 75.1
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 9.3e-78 294.3 199 74.9
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.2e-77 293.9 199 75.4
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 2.1e-77 293.1 204 74.5
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.7e-77 292.7 205 75.1
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 4.6e-77 292.0 203 73.4
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 4.6e-77 292.0 200 75.0
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 6.0e-77 291.6 201 74.6
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.3e-76 290.4 202 74.3
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 1.8e-76 290.0 205 72.7
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 2.3e-76 289.7 204 72.5
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 3.0e-76 289.3 204 73.5
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.9e-76 288.9 200 74.0
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.9e-76 288.9 200 75.0
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.9e-76 288.9 200 75.0
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 5.1e-76 288.5 205 73.2
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 5.1e-76 288.5 187 77.5
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 5.1e-76 288.5 200 72.5
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 6.7e-76 288.1 200 72.5
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 8.7e-76 287.7 203 72.9
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.1e-75 287.3 200 74.0
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.5e-75 287.0 205 71.7
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.5e-75 287.0 203 73.4
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.9e-75 286.6 200 74.5
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 2.5e-75 286.2 203 73.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 2.5e-75 286.2 173 82.7
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 3.3e-75 285.8 206 73.8
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 3.3e-75 285.8 204 74.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 5.6e-75 285.0 204 71.6
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 7.4e-75 284.6 204 72.1
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 1.3e-74 283.9 189 77.2
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.6e-74 283.5 204 70.1
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 2.8e-74 282.7 193 75.1
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 2.8e-74 282.7 205 72.7
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 8.1e-74 281.2 199 72.4
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 1.1e-73 280.8 183 77.0
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.4e-73 279.6 208 73.1
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 3.1e-73 279.3 198 70.7
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 4.0e-73 278.9 185 77.3
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.2e-72 277.3 204 71.6
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 2.0e-72 276.6 199 69.8
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-72 276.2 203 70.0
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 7.6e-72 274.6 203 70.4
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 9.9e-72 274.2 204 70.1
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.3e-71 273.9 203 70.0
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.7e-71 273.5 193 72.5
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.2e-71 273.1 200 68.5
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 6.4e-71 271.6 200 68.0
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 6.4e-71 271.6 203 69.0
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.1e-70 270.8 200 68.5
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 1.1e-70 270.8 200 69.0
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 1.4e-70 270.4 203 68.0
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.9e-70 270.0 204 70.1
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 2.5e-70 269.6 195 71.3
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 5.5e-70 268.5 201 67.7
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.1e-70 268.1 221 66.1
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.2e-69 267.3 203 67.5
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.2e-69 267.3 203 67.5
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.2e-69 267.3 203 67.5
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 1.6e-69 266.9 202 66.3
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 2.7e-69 266.2 199 68.3
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 7.9e-69 264.6 219 65.3
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.3e-68 263.8 201 66.7
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.8e-68 263.5 201 66.7
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.8e-68 263.5 190 70.5
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.8e-68 263.5 204 67.2
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 2.3e-68 263.1 204 66.7
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 2.3e-68 263.1 200 68.5
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 2.3e-68 263.1 203 66.0
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 5.1e-68 261.9 201 66.7
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.5e-67 260.4 190 70.0
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 1.9e-67 260.0 185 70.8
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 3.3e-67 259.2 202 65.3
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 5.6e-67 258.5 204 65.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 7.4e-67 258.1 196 66.8
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-66 257.3 198 67.7
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.3e-66 257.3 206 66.0
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 8.2e-66 254.6 197 68.5
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 8.2e-66 254.6 203 66.0
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.1e-65 254.2 235 59.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.8e-65 253.4 204 67.2
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 3.1e-65 252.7 188 68.1
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 5.8e-64 248.4 208 63.5
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.0e-63 247.7 176 71.0
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.0e-63 247.7 222 59.9
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.0e-63 247.7 197 65.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 4.6e-61 238.8 315 46.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 5.1e-60 235.3 153 77.8
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 3.7e-58 229.2 237 54.4
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 5.3e-57 225.3 166 69.9
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.5e-56 223.8 155 73.5
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 4.5e-56 222.2 203 59.1
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 4.2e-46 189.1 116 81.9
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 7.2e-46 188.3 132 72.0
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 1.0e-44 184.5 106 84.9
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-43 179.9 133 69.2
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 3.3e-43 179.5 120 74.2
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 4.4e-43 179.1 116 77.6
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 7.4e-43 178.3 132 68.2
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.7e-42 177.2 130 69.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 2.6e-40 169.9 151 58.3
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 2.9e-39 166.4 108 76.9
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 1.2e-32 144.4 176 42.6
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-30 137.9 146 53.4
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 7.2e-30 135.2 185 43.8
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.6e-29 134.0 203 44.8
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 7.7e-24 115.2 209 36.4
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.0e-23 114.8 138 43.5
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 6.1e-21 105.5 91 57.1
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 8.0e-21 105.1 133 47.4
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.0e-20 104.8 206 35.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 3.4e-19 99.8 226 33.6
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 6.8e-12 75.5 150 33.3
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 2.7e-08 63.5 69 43.5
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 7.8e-08 62.0 55 61.8
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.7e-07 60.8 36 83.3
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-06 57.0 48 58.3


User provided reference genes

Program Settings