Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 0.0e+00 2144.0 1067 100.0
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 2.4e-289 999.2 1236 47.5
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.9e-270 936.4 1249 44.4
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 8.4e-234 814.7 1173 42.4
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 3.9e-231 805.8 1272 41.2
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 1.1e-230 804.3 1326 39.5
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 7.4e-230 801.6 1300 39.5
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 9.6e-230 801.2 728 57.6
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 3.7e-229 799.3 1249 40.0
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.8e-228 797.0 1207 41.8
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.5e-227 793.9 1237 40.6
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 5.8e-227 792.0 1250 40.2
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.9e-225 786.9 1292 39.6
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 9.3e-225 784.6 736 55.7
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.2e-224 784.3 1263 39.9
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 4.3e-222 775.8 1246 40.4
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 1.3e-221 774.2 1308 38.1
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 6.3e-221 771.9 1263 39.2
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 6.3e-221 771.9 1240 39.7
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 1.1e-220 771.2 1249 39.3
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 2.4e-220 770.0 1274 39.0
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 9.0e-220 768.1 1251 38.5
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 1.2e-219 767.7 1263 39.1
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 1.2e-219 767.7 1328 36.4
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 5.9e-219 765.4 1232 40.5
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 7.2e-217 758.4 1277 37.8
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 7.9e-216 755.0 1262 38.8
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.1e-214 751.1 1199 39.5
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 1.3e-213 747.7 1240 38.4
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 4.8e-213 745.7 1243 37.7
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 6.9e-212 741.9 1279 37.8
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 6.9e-212 741.9 1323 37.3
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 2.9e-210 736.5 1234 37.8
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 1.1e-209 734.6 1268 38.6
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.4e-209 734.2 1263 37.2
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 9.4e-209 731.5 1230 37.3
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 7.4e-206 721.8 1257 37.9
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 6.3e-205 718.8 1246 38.4
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 1.4e-204 717.6 1281 36.6
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 9.1e-204 714.9 1298 36.4
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 2.0e-203 713.8 1254 37.8
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 7.7e-203 711.8 1245 36.5
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 2.2e-202 710.3 733 51.7
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.8e-199 700.7 1240 37.2
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 1.5e-198 697.6 1235 37.8
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 4.4e-198 696.0 1241 37.6
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 5.7e-198 695.7 1245 37.3
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 1.8e-196 690.6 1133 39.9
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 7.0e-196 688.7 1208 38.0
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 4.2e-193 679.5 1209 37.8
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.2e-192 677.9 1206 37.6
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 2.7e-192 676.8 1208 37.3
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 3.4e-190 669.8 735 49.4
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 5.5e-185 652.5 743 47.8
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 1.8e-183 647.5 1257 36.9
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 2.3e-183 647.1 1434 32.7
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 3.0e-183 646.7 1215 35.9
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 7.7e-179 632.1 758 44.7
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 1.5e-169 601.3 1066 38.6
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 8.0e-168 595.5 773 44.2
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 3.7e-165 586.6 890 39.3
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 3.0e-162 577.0 1261 33.1
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 2.8e-160 570.5 1181 34.1
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 3.6e-160 570.1 1177 34.2
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 8.1e-160 568.9 1177 34.2
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 5.2e-159 566.2 1179 33.8
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 6.8e-159 565.8 1202 33.2
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 2.0e-158 564.3 1182 34.0
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 2.6e-158 563.9 1194 33.4
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 8.3e-157 558.9 1180 34.0
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 1.4e-156 558.1 1178 33.5
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 3.6e-152 543.5 1189 32.6
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 4.8e-136 490.0 1135 33.0
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 4.8e-136 490.0 574 45.6
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.7e-133 481.5 580 48.1
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.1e-128 464.5 719 38.4
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 4.9e-117 426.8 1037 32.2
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 3.4e-110 404.1 891 32.7
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.3e-109 402.1 531 40.1
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 2.5e-108 397.9 1009 33.0
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 2.1e-107 394.8 765 32.8
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 6.3e-104 383.3 872 30.8
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 8.2e-104 382.9 865 34.9
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 4.1e-103 380.6 793 32.5
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 7.9e-99 366.3 366 52.5
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 7.9e-99 366.3 355 52.1
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 1.5e-97 362.1 356 52.0
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 6.3e-96 356.7 391 48.6
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 4.2e-92 344.0 376 50.3
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 5.9e-86 323.6 316 50.3
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.8e-79 302.0 408 42.4
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 5.0e-77 293.9 422 39.8
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 1.4e-71 275.8 333 44.4
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 7.2e-68 263.5 856 28.3
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 2.1e-67 261.9 300 45.7
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 4.1e-63 247.7 890 25.8
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 7.0e-55 220.3 386 37.6
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.3e-53 216.1 334 38.9
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.3e-53 216.1 334 38.9
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.1e-51 208.8 476 29.8
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.8e-51 208.4 183 59.6
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.9e-47 195.7 202 51.0
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 3.0e-45 188.3 258 44.2
Dinv12038 Davidia involucrata HOM05D005395 ORTHO05D006352 2.5e-44 185.3 177 54.2
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 4.7e-43 181.0 242 40.5
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 7.8e-38 163.7 560 25.4
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 7.8e-38 163.7 252 37.7
Lj7P570T32 Lonicera japonica HOM05D005395 ORTHO05D006352 4.3e-36 157.9 189 45.0
CAN.G1820.3 Capsicum annuum HOM05D005395 ORTHO05D006352 3.6e-35 154.8 186 45.2
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 3.0e-29 135.2 218 36.7
Lalb_Chr13g0291131 Lupinus albus HOM05D005395 ORTHO05D006352 3.3e-28 131.7 268 35.8
CDE07G0235 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 2.4e-26 125.6 253 35.2
BcaC04g18840 Brassica carinata HOM05D005395 ORTHO05D006352 6.4e-24 117.5 178 40.4
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 1.9e-23 115.9 183 37.2
Cpa.g.sc245.13 Carica papaya HOM05D005395 ORTHO05D006352 1.0e-21 110.2 124 45.2
Lsat_1_v5_gn_3_2761 Lactuca sativa HOM05D005395 ORTHO05D006352 1.0e-21 110.2 254 33.5
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 2.3e-21 109.0 347 28.5
ATR0829G203 Amborella trichopoda HOM05D005395 ORTHO05D006352 7.6e-17 94.0 188 32.4
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 1.9e-15 89.4 115 41.7
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 5.1e-13 81.3 85 45.9
Nitab4.5_0002179g0020 Nicotiana tabacum HOM05D005395 ORTHO05D006352 8.7e-13 80.5 133 33.8
SHI19146 Sapria himalayana HOM05D005395 ORTHO05D002065 2.8e-11 75.5 92 45.7
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 6.2e-11 74.3 82 47.6
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 6.9e-10 70.9 94 40.4
CSS0036458 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 7.6e-09 67.4 82 46.3
Os12g0293100 Oryza sativa ssp. japonica HOM05D005395 ORTHO05D006352 9.9e-09 67.0 185 30.8
CSS0041236 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 2.9e-08 65.5 82 45.1
SEGI_37340 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 4.9e-08 64.7 151 26.5
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 6.4e-08 64.3 69 42.0
HPP92_011289 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.9e-07 62.8 202 27.2


User provided reference genes

Program Settings