Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1329 Utricularia gibba HOM05D003186 ORTHO05D003452 6.1e-67 257.3 126 100.0
unitig_61.g26423 Utricularia gibba HOM05D003186 ORTHO05D003452 1.6e-27 126.3 99 62.6
unitig_750.g28400 Utricularia gibba HOM05D003186 ORTHO05D003452 1.2e-17 93.6 99 52.5
unitig_76.g29073 Utricularia gibba HOM05D003186 ORTHO05D003452 1.2e-17 93.6 99 52.5
MSTRG.17102 Avicennia marina HOM05D003186 ORTHO05D003452 4.4e-17 91.7 120 45.8
MSTRG.20661 Avicennia marina HOM05D003186 ORTHO05D003452 1.7e-16 89.7 128 45.3
Migut.B01481 Erythranthe guttata HOM05D003186 ORTHO05D003452 2.9e-16 89.0 122 46.7
MSTRG.28131 Avicennia marina HOM05D003186 ORTHO05D003452 6.4e-16 87.8 110 47.3
Solyc01g088530.2 Solanum lycopersicum HOM05D003186 ORTHO05D003452 1.4e-15 86.7 109 47.7
Nn6g33672 Nelumbo nucifera HOM05D003186 ORTHO05D003452 2.4e-15 85.9 99 51.5
Oeu034770.1 Olea europaea HOM05D003186 ORTHO05D003452 7.1e-15 84.3 106 50.0
SalBow4G0872 Salvia bowleyana HOM05D003186 ORTHO05D003452 7.1e-15 84.3 89 53.9
Nn1g00622 Nelumbo nucifera HOM05D003186 ORTHO05D003452 9.3e-15 84.0 98 49.0
Oeu024385.1 Olea europaea HOM05D003186 ORTHO05D003452 9.3e-15 84.0 122 47.5
Gohir.A12G099500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.6e-14 83.2 99 48.5
Sopen01g035390 Solanum pennellii HOM05D003186 ORTHO05D003452 2.1e-14 82.8 113 46.9
PGSC0003DMG400001684 Solanum tuberosum HOM05D003186 ORTHO05D003452 2.1e-14 82.8 113 46.9
Gohir.D12G102500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 2.7e-14 82.4 129 41.9
Actinidia05791 Actinidia chinensis HOM05D003186 ORTHO05D003452 3.5e-14 82.0 96 50.0
Actinidia33295 Actinidia chinensis HOM05D003186 ORTHO05D003452 3.5e-14 82.0 89 50.6
ECA236G2684 Erigeron canadensis HOM05D003186 ORTHO05D003452 3.5e-14 82.0 94 51.1
Gorai.008G111700 Gossypium raimondii HOM05D003186 ORTHO05D003452 3.5e-14 82.0 129 41.9
Lj9P549T18 Lonicera japonica HOM05D003186 ORTHO05D003452 3.5e-14 82.0 111 45.0
Actinidia30956 Actinidia chinensis HOM05D003186 ORTHO05D003452 4.6e-14 81.6 107 47.7
Atru.chr5.38 Acer truncatum HOM05D003186 ORTHO05D003452 7.9e-14 80.9 102 48.0
Atru.chr5.68 Acer truncatum HOM05D003186 ORTHO05D003452 7.9e-14 80.9 102 48.0
SGA_v2.0_scaffold77G25250 Striga asiatica HOM05D003186 ORTHO05D003452 7.9e-14 80.9 113 45.1
Duzib268G0279 Durio zibethinus HOM05D003186 ORTHO05D003452 1.7e-13 79.7 100 47.0
Gohir.A08G141000 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.7e-13 79.7 89 50.6
Dinv44017 Davidia involucrata HOM05D003186 ORTHO05D003452 2.3e-13 79.3 107 47.7
Gohir.D08G162100 Gossypium hirsutum HOM05D003186 ORTHO05D003452 5.1e-13 78.2 123 42.3
CAN.G756.11 Capsicum annuum HOM05D003186 ORTHO05D003452 6.6e-13 77.8 110 47.3
Migut.N01712 Erythranthe guttata HOM05D003186 ORTHO05D003452 6.6e-13 77.8 110 42.7
SalBow5G4877 Salvia bowleyana HOM05D003186 ORTHO05D003452 8.7e-13 77.4 124 44.4
TAR375G0380 Trochodendron aralioides HOM05D003186 ORTHO05D003452 1.1e-12 77.0 98 50.0
Hma1.2p1_0021F.1_g014275 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 1.5e-12 76.6 99 45.5
Hma1.2p1_0021F.1_g014290 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 1.5e-12 76.6 99 45.5
Nitab4.5_0016340g0010 Nicotiana tabacum HOM05D003186 ORTHO05D003452 1.9e-12 76.3 122 40.2
PGR042G2698 Punica granatum HOM05D003186 ORTHO05D003452 2.5e-12 75.9 116 42.2
TAR374G0545 Trochodendron aralioides HOM05D003186 ORTHO05D003452 2.5e-12 75.9 89 48.3
Glyma.09G247300 Glycine max HOM05D003186 ORTHO05D003452 3.3e-12 75.5 132 40.2
Gorai.004G067500 Gossypium raimondii HOM05D003186 ORTHO05D003452 3.3e-12 75.5 102 44.1
Lsat_1_v5_gn_7_11660 Lactuca sativa HOM05D003186 ORTHO05D003452 3.3e-12 75.5 114 44.7
Thecc.01G403000 Theobroma cacao HOM05D003186 ORTHO05D003452 3.3e-12 75.5 106 46.2
Duzib138G0449 Durio zibethinus HOM05D003186 ORTHO05D003452 4.3e-12 75.1 103 46.6
Gohir.D08G065200 Gossypium hirsutum HOM05D003186 ORTHO05D003452 4.3e-12 75.1 105 45.7
Nitab4.5_0004088g0100 Nicotiana tabacum HOM05D003186 ORTHO05D003452 4.3e-12 75.1 117 42.7
TWI59G0953 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 4.3e-12 75.1 113 42.5
COL.COLO4_12347 Corchorus olitorius HOM05D003186 ORTHO05D003452 5.6e-12 74.7 104 46.2
Haze_02907 Corylus avellana HOM05D003186 ORTHO05D003452 5.6e-12 74.7 107 43.9
Nitab4.5_0006873g0020 Nicotiana tabacum HOM05D003186 ORTHO05D003452 5.6e-12 74.7 119 42.0
THA.LOC104817174 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 5.6e-12 74.7 86 53.5
Ciclev10021280m.g Citrus clementina HOM05D003186 ORTHO05D003452 7.4e-12 74.3 101 44.6
Phvul.008G051200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 7.4e-12 74.3 108 40.7
Peaxi162Scf00745g00012 Petunia axillaris HOM05D003186 ORTHO05D003452 9.6e-12 73.9 118 42.4
Cfa011019 Carpinus fangiana HOM05D003186 ORTHO05D003452 1.3e-11 73.6 106 43.4
Gohir.A08G055900 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.3e-11 73.6 107 43.0
Gorai.004G168400 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.6e-11 73.2 127 40.2
Lj1g0019973 Lotus japonicus HOM05D003186 ORTHO05D003452 1.6e-11 73.2 106 44.3
Oeu037407.1 Olea europaea HOM05D003186 ORTHO05D003452 1.6e-11 73.2 99 41.4
Rhsim01G0144500 Rhododendron simsii HOM05D003186 ORTHO05D003452 1.6e-11 73.2 89 52.8
Manes.05G059100 Manihot esculenta HOM05D003186 ORTHO05D003452 2.1e-11 72.8 103 44.7
QL04p025941 Quercus lobata HOM05D003186 ORTHO05D003452 2.1e-11 72.8 113 42.5
QL04p026933 Quercus lobata HOM05D003186 ORTHO05D003452 2.1e-11 72.8 113 42.5
Sed0022506 Sechium edule HOM05D003186 ORTHO05D003452 2.1e-11 72.8 106 45.3
THA.LOC104803082 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 2.1e-11 72.8 123 40.7
VMungo1383G2278 Vigna mungo HOM05D003186 ORTHO05D003452 4.8e-11 71.6 108 42.6
Carub.0004s2715 Capsella rubella HOM05D003186 ORTHO05D003452 8.1e-11 70.9 135 37.8
Sabra02G0105200 Salix brachista HOM05D003186 ORTHO05D003452 8.1e-11 70.9 125 36.8
A05p04750 Brassica napus HOM05D003186 ORTHO05D003452 1.1e-10 70.5 103 42.7
Glyma.18G245700 Glycine max HOM05D003186 ORTHO05D003452 1.1e-10 70.5 118 40.7
BcaB02g08836 Brassica carinata HOM05D003186 ORTHO05D003452 1.4e-10 70.1 91 45.1
HanXRQChr04g0113081 Helianthus annuus HOM05D003186 ORTHO05D003452 1.4e-10 70.1 103 44.7
DCAR_025021 Daucus carota HOM05D003186 ORTHO05D003452 1.8e-10 69.7 91 45.1
Potri.002G135400 Populus trichocarpa HOM05D003186 ORTHO05D003452 1.8e-10 69.7 123 36.6
Rhsim07G0039500 Rhododendron simsii HOM05D003186 ORTHO05D003452 1.8e-10 69.7 139 38.8
BcaC02g12291 Brassica carinata HOM05D003186 ORTHO05D003452 2.4e-10 69.3 91 45.1
C04p05560 Brassica napus HOM05D003186 ORTHO05D003452 2.4e-10 69.3 91 45.1
CsaV3_6G006600 Cucumis sativus L. HOM05D003186 ORTHO05D003452 2.4e-10 69.3 113 40.7
CANSAT25G0028 Cannabis sativa HOM05D003186 ORTHO05D003452 3.1e-10 68.9 130 37.7
Glyma.07G120800 Glycine max HOM05D003186 ORTHO05D003452 3.1e-10 68.9 99 41.4
Gohir.D11G078500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 3.1e-10 68.9 94 43.6
Gorai.007G084000 Gossypium raimondii HOM05D003186 ORTHO05D003452 3.1e-10 68.9 94 43.6
EL10Ac1g00705 Beta vulgaris HOM05D003186 ORTHO05D003452 4.0e-10 68.6 112 41.1
BraA05t19451Z Brassica rapa HOM05D003186 ORTHO05D003452 4.0e-10 68.6 85 47.1
ClCG06G000800 Citrullus lanatus HOM05D003186 ORTHO05D003452 4.0e-10 68.6 116 38.8
MELO3C022461.2 Cucumis melo HOM05D003186 ORTHO05D003452 4.0e-10 68.6 115 40.0
Phvul.010G041200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 4.0e-10 68.6 112 38.4
arahy.Tifrunner.gnm1.ann1.U9U8W4 Arachis hypogaea HOM05D003186 ORTHO05D003452 5.3e-10 68.2 108 40.7
Thhalv10001551m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 5.3e-10 68.2 89 44.9
Thhalv10006502m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 5.3e-10 68.2 131 37.4
FAN06G1121 Fragaria x ananassa HOM05D003186 ORTHO05D003452 5.3e-10 68.2 115 42.6
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 6.9e-10 67.8 102 39.2
A09p52480 Brassica napus HOM05D003186 ORTHO05D003452 6.9e-10 67.8 120 39.2
BolC4t22186H Brassica oleracea HOM05D003186 ORTHO05D003452 6.9e-10 67.8 108 42.6
BraA09t40678Z Brassica rapa HOM05D003186 ORTHO05D003452 6.9e-10 67.8 119 37.8
MELO3C006262.2 Cucumis melo HOM05D003186 ORTHO05D003452 6.9e-10 67.8 104 39.4
Lalb_Chr03g0040811 Lupinus albus HOM05D003186 ORTHO05D003452 6.9e-10 67.8 137 35.0
Hund17130 Selenicereus undatus HOM05D003186 ORTHO05D003452 6.9e-10 67.8 95 44.2
AT2G44600 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 9.0e-10 67.4 137 34.3
Ca_08022_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 1.2e-09 67.0 97 42.3
Aa31LG10G14340 Aethionema arabicum HOM05D003186 ORTHO05D003452 1.5e-09 66.6 85 42.4
BcaC07g40517 Brassica carinata HOM05D003186 ORTHO05D003452 1.5e-09 66.6 119 38.7
BcaC07g40522 Brassica carinata HOM05D003186 ORTHO05D003452 1.5e-09 66.6 119 38.7
C08p35230 Brassica napus HOM05D003186 ORTHO05D003452 1.5e-09 66.6 119 38.7
BolC8t51117H Brassica oleracea HOM05D003186 ORTHO05D003452 1.5e-09 66.6 119 38.7
CARHR139820 Cardamine hirsuta HOM05D003186 ORTHO05D003452 1.5e-09 66.6 117 35.9
Duzib133G0015 Durio zibethinus HOM05D003186 ORTHO05D003452 1.5e-09 66.6 102 42.2
MD07G1088100 Malus domestica HOM05D003186 ORTHO05D003452 1.5e-09 66.6 105 42.9
PSO339G5444 Papaver somniferum HOM05D003186 ORTHO05D003452 1.5e-09 66.6 104 45.2
unitig_26.g8864 Utricularia gibba HOM05D003186 ORTHO05D003452 1.5e-09 66.6 65 58.5
Ah.05g177570 Amaranthus hybridus HOM05D003186 ORTHO05D003452 2.0e-09 66.2 106 42.5
Cc02_g25690 Coffea canephora HOM05D003186 ORTHO05D003452 2.0e-09 66.2 112 41.1
FAN01G1315 Fragaria x ananassa HOM05D003186 ORTHO05D003452 2.0e-09 66.2 119 38.7
Psat3g101600 Pisum sativum HOM05D003186 ORTHO05D003452 2.0e-09 66.2 104 39.4
Dinv43584 Davidia involucrata HOM05D003186 ORTHO05D003452 2.6e-09 65.9 113 38.1
PSO648G0113 Papaver somniferum HOM05D003186 ORTHO05D003452 2.6e-09 65.9 104 45.2
CiPaw.14G016300 Carya illinoinensis HOM05D003186 ORTHO05D003452 3.4e-09 65.5 113 40.7
Nn3g16835 Nelumbo nucifera HOM05D003186 ORTHO05D003452 3.4e-09 65.5 98 41.8
HanXRQChr06g0168251 Helianthus annuus HOM05D003186 ORTHO05D003452 4.5e-09 65.1 96 44.8
HPP92_025455 Vanilla planifolia HOM05D003186 ORTHO05D003452 4.5e-09 65.1 107 43.9
Eucgr.D01170 Eucalyptus grandis HOM05D003186 ORTHO05D003452 5.8e-09 64.7 82 45.1
TPR.G27403 Trifolium pratense HOM05D003186 ORTHO05D003452 5.8e-09 64.7 101 40.6
CiPaw.13G021700 Carya illinoinensis HOM05D003186 ORTHO05D003452 7.6e-09 64.3 113 39.8
Ca_23143_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 7.6e-09 64.3 80 46.2
Glyma.03G103001 Glycine max HOM05D003186 ORTHO05D003452 7.6e-09 64.3 120 35.0
HanXRQChr17g0550401 Helianthus annuus HOM05D003186 ORTHO05D003452 7.6e-09 64.3 69 52.2
Lj3g0018708 Lotus japonicus HOM05D003186 ORTHO05D003452 7.6e-09 64.3 83 45.8
MBI04_g03333_MAGBIO Magnolia biondii HOM05D003186 ORTHO05D003452 7.6e-09 64.3 87 48.3
Psat4g219160 Pisum sativum HOM05D003186 ORTHO05D003452 9.9e-09 63.9 79 46.8
VMungo0331G1717 Vigna mungo HOM05D003186 ORTHO05D003452 9.9e-09 63.9 124 37.1
CsaV3_3G010380 Cucumis sativus L. HOM05D003186 ORTHO05D003452 1.3e-08 63.5 104 37.5
FAN10G1238 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.3e-08 63.5 117 38.5
Prupe.2G114900 Prunus persica HOM05D003186 ORTHO05D003452 1.3e-08 63.5 112 38.4
Sed0018587 Sechium edule HOM05D003186 ORTHO05D003452 1.3e-08 63.5 104 42.3
DCAR_015777 Daucus carota HOM05D003186 ORTHO05D003452 1.7e-08 63.2 111 39.6
FAN10G4096 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.7e-08 63.2 117 41.0
Zm00001eb251070 Zea mays HOM05D003186 ORTHO05D003452 1.7e-08 63.2 88 45.5
FAN03G3421 Fragaria x ananassa HOM05D003186 ORTHO05D003452 2.2e-08 62.8 120 35.8
Aa31LG1G26150 Aethionema arabicum HOM05D003186 ORTHO05D003452 2.9e-08 62.4 102 39.2
FvH4_7g08720 Fragaria vesca HOM05D003186 ORTHO05D003452 3.8e-08 62.0 121 38.8
Sed0008398 Sechium edule HOM05D003186 ORTHO05D003452 3.8e-08 62.0 116 37.9
Potri.014G043800 Populus trichocarpa HOM05D003186 ORTHO05D003452 6.4e-08 61.2 124 34.7
Sp4g26690 Schrenkiella parvula HOM05D003186 ORTHO05D003452 6.4e-08 61.2 95 41.1
BcaC07g40415 Brassica carinata HOM05D003186 ORTHO05D003452 8.4e-08 60.8 82 43.9
Nitab4.5_0000204g0050 Nicotiana tabacum HOM05D003186 ORTHO05D003452 8.4e-08 60.8 108 38.9
AL4G43640 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 1.1e-07 60.5 63 50.8
Gohir.A11G073800 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.1e-07 60.5 94 40.4
Sp5g03010 Schrenkiella parvula HOM05D003186 ORTHO05D003452 1.1e-07 60.5 88 40.9
Zm00001eb187670 Zea mays HOM05D003186 ORTHO05D003452 1.1e-07 60.5 87 43.7
AL5G42410 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 1.4e-07 60.1 91 38.5
Lalb_Chr19g0126271 Lupinus albus HOM05D003186 ORTHO05D003452 1.4e-07 60.1 129 34.1
Eucgr.E01708 Eucalyptus grandis HOM05D003186 ORTHO05D003452 1.9e-07 59.7 128 35.2
Lsat_1_v5_gn_4_38621 Lactuca sativa HOM05D003186 ORTHO05D003452 1.9e-07 59.7 68 50.0
Sabra14G0031700 Salix brachista HOM05D003186 ORTHO05D003452 1.9e-07 59.7 129 34.9
THA.LOC104827680 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 1.9e-07 59.7 118 39.0
CDE11G0290 Ceratophyllum demersum HOM05D003186 ORTHO05D003452 2.4e-07 59.3 94 44.7
BcaB02g08186 Brassica carinata HOM05D003186 ORTHO05D003452 5.5e-07 58.2 80 40.0
Os04g0588000 Oryza sativa ssp. japonica HOM05D003186 ORTHO05D003452 5.5e-07 58.2 85 41.2
PGR004G1173 Punica granatum HOM05D003186 ORTHO05D003452 5.5e-07 58.2 55 56.4
ATR0665G229 Amborella trichopoda HOM05D003186 ORTHO05D003452 9.3e-07 57.4 100 36.0
AT3G60200 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 9.3e-07 57.4 93 38.7
BraA04t18801Z Brassica rapa HOM05D003186 ORTHO05D003452 1.2e-06 57.0 59 49.2
Os02g0689500 Oryza sativa ssp. japonica HOM05D003186 ORTHO05D003452 1.6e-06 56.6 90 41.1
CDE12G0434 Ceratophyllum demersum HOM05D003186 ORTHO05D003452 2.7e-06 55.8 75 44.0
ECA234G0702 Erigeron canadensis HOM05D003186 ORTHO05D003452 3.5e-06 55.5 110 32.7
A04p33400 Brassica napus HOM05D003186 ORTHO05D003452 4.6e-06 55.1 70 44.3
BcaC02g07102 Brassica carinata HOM05D003186 ORTHO05D003452 7.9e-06 54.3 60 48.3
C04p71110 Brassica napus HOM05D003186 ORTHO05D003452 7.9e-06 54.3 60 48.3
BolC4t28614H Brassica oleracea HOM05D003186 ORTHO05D003452 7.9e-06 54.3 60 48.3
Zm00001eb072580 Zea mays HOM05D003186 ORTHO05D003452 7.9e-06 54.3 113 35.4


User provided reference genes

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