Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g119 Utricularia gibba HOM05D006072 ORTHO05D007363 7.5e-104 380.6 196 100.0
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 5.3e-41 171.8 156 55.8
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 1.2e-40 170.6 170 52.4
Oeu025733.1 Olea europaea HOM05D006072 ORTHO05D007363 1.3e-39 167.2 182 50.0
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 4.9e-39 165.2 191 48.2
Peaxi162Scf00641g00039 Petunia axillaris HOM05D006072 ORTHO05D007363 6.4e-39 164.9 184 47.8
SalBow4G0595 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.4e-38 163.7 158 53.2
Sopen09g027060 Solanum pennellii HOM05D006072 ORTHO05D007363 4.2e-38 162.2 190 48.9
PGSC0003DMG400019330 Solanum tuberosum HOM05D006072 ORTHO05D007363 7.1e-38 161.4 194 47.9
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 3.5e-37 159.1 166 50.0
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 7.9e-37 157.9 168 50.0
CAN.G3.7 Capsicum annuum HOM05D006072 ORTHO05D007363 1.0e-36 157.5 185 48.1
Oeu007228.1 Olea europaea HOM05D006072 ORTHO05D007363 3.0e-36 156.0 149 53.7
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 6.7e-36 154.8 166 48.2
Nitab4.5_0000876g0020 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.5e-35 152.9 184 45.1
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 4.3e-35 152.1 159 52.2
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 1.3e-34 150.6 161 50.3
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 1.6e-34 150.2 155 50.3
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 2.8e-34 149.4 154 48.7
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 3.7e-34 149.1 148 52.7
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 4.8e-34 148.7 152 53.3
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 4.8e-34 148.7 152 53.3
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 6.2e-34 148.3 152 52.6
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 8.1e-34 147.9 152 52.6
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 1.1e-33 147.5 155 50.3
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 1.1e-33 147.5 161 50.3
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 1.1e-33 147.5 161 50.3
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 1.4e-33 147.1 183 43.7
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 1.8e-33 146.7 166 48.2
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 2.4e-33 146.4 151 49.7
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 2.4e-33 146.4 156 50.6
CSS0011017 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 3.1e-33 146.0 184 44.0
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 3.1e-33 146.0 169 46.2
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 5.3e-33 145.2 152 50.0
CAN.G1.46 Capsicum annuum HOM05D006072 ORTHO05D007363 5.3e-33 145.2 184 44.0
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 5.3e-33 145.2 156 49.4
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 5.3e-33 145.2 154 51.3
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 5.3e-33 145.2 161 49.7
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 5.3e-33 145.2 179 48.6
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 5.3e-33 145.2 155 47.7
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.3e-33 145.2 155 48.4
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 6.9e-33 144.8 162 48.1
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 6.9e-33 144.8 162 48.1
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 6.9e-33 144.8 161 47.8
Sopen10g022790 Solanum pennellii HOM05D006072 ORTHO05D007363 9.0e-33 144.4 147 50.3
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 1.2e-32 144.1 146 50.0
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 1.2e-32 144.1 165 46.1
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.5e-32 143.7 154 49.4
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.5e-32 143.7 181 44.8
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 2.0e-32 143.3 161 46.6
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 2.6e-32 142.9 152 49.3
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 2.6e-32 142.9 168 47.6
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 3.4e-32 142.5 183 44.8
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 3.4e-32 142.5 171 44.4
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 4.5e-32 142.1 153 48.4
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 4.5e-32 142.1 153 48.4
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 5.8e-32 141.7 157 49.7
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 5.8e-32 141.7 177 43.5
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.8e-32 141.7 199 40.7
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.7e-31 140.2 154 48.7
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 2.2e-31 139.8 159 47.8
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 2.9e-31 139.4 160 43.8
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 2.9e-31 139.4 150 45.3
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 3.8e-31 139.0 153 47.7
Eucgr.H00590 Eucalyptus grandis HOM05D006072 ORTHO05D007363 4.9e-31 138.7 149 47.7
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 4.9e-31 138.7 154 48.1
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 4.9e-31 138.7 164 48.2
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 6.4e-31 138.3 148 50.0
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 6.4e-31 138.3 153 49.0
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 8.4e-31 137.9 168 48.2
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 8.4e-31 137.9 150 48.7
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 4.2e-30 135.6 158 46.2
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 5.5e-30 135.2 202 42.1
PGR083G2817 Punica granatum HOM05D006072 ORTHO05D007363 7.1e-30 134.8 149 45.6
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 1.2e-29 134.0 165 44.8
Lsat_1_v5_gn_5_36701 Lactuca sativa HOM05D006072 ORTHO05D007363 2.7e-29 132.9 150 47.3
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 8.7e-28 127.9 162 46.3
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 8.7e-28 127.9 163 42.9
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 1.1e-27 127.5 147 43.5
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 3.3e-27 125.9 155 46.5
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 9.6e-27 124.4 114 50.0
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 2.1e-26 123.2 171 41.5
arahy.Tifrunner.gnm1.ann1.4ZS2ZJ Arachis hypogaea HOM05D006072 ORTHO05D007363 5.3e-25 118.6 147 44.9
arahy.Tifrunner.gnm1.ann1.UPZ3Q7 Arachis hypogaea HOM05D006072 ORTHO05D007363 5.3e-25 118.6 147 44.9
arahy.Tifrunner.gnm1.ann1.YR9HNH Arachis hypogaea HOM05D006072 ORTHO05D007363 5.3e-25 118.6 147 44.9
Lalb_Chr10g0094781 Lupinus albus HOM05D006072 ORTHO05D007363 1.2e-24 117.5 124 46.0
Migut.D00310 Erythranthe guttata HOM05D006072 ORTHO05D007363 1.5e-24 117.1 165 43.0
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 2.2e-23 113.2 107 49.5
ATR0598G249 Amborella trichopoda HOM05D006072 ORTHO05D007363 2.9e-23 112.8 163 38.7
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.5e-21 105.9 135 36.3
ATR0598G193 Amborella trichopoda HOM05D006072 ORTHO05D007363 8.7e-20 101.3 139 38.1
Ca_20317_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 1.5e-19 100.5 158 39.9
ATR0598G294 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.3e-19 99.4 149 34.2
Dinv12556 Davidia involucrata HOM05D006072 ORTHO05D007363 7.4e-19 98.2 94 50.0
Actinidia12426 Actinidia chinensis HOM05D006072 ORTHO05D007363 1.2e-16 90.9 162 40.7
Rhsim04G0134200 Rhododendron simsii HOM05D001348 ORTHO05D010969 2.6e-16 89.7 144 44.4
PGR083G1472 Punica granatum HOM05D006072 ORTHO05D007363 7.7e-16 88.2 166 36.7
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.7e-15 87.0 85 44.7
Nn2g15226 Nelumbo nucifera HOM05D006072 ORTHO05D007363 1.9e-14 83.6 78 46.2
Lsat_1_v5_gn_1_2880 Lactuca sativa HOM05D006072 ORTHO05D007363 9.4e-14 81.3 77 48.1
Medtr0082s0140 Medicago truncatula HOM05D006072 ORTHO05D007363 2.1e-13 80.1 153 36.6
Cpa.g.sc1.282 Carica papaya HOM05D006072 ORTHO05D007363 7.4e-11 71.6 89 38.2
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 7.7e-08 61.6 153 28.8
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.7e-08 61.6 154 29.2
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-07 60.5 141 31.2
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.9e-07 59.7 154 29.2
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 3.8e-07 59.3 154 32.5
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.0e-07 58.9 153 29.4
Solyc09g065320.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 5.0e-07 58.9 38 63.2
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 6.5e-07 58.5 154 32.5
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.5e-07 58.5 133 29.3
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 1.1e-06 57.8 131 30.5
FAN06G1995 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-06 57.8 120 31.7
Os02g0491300 Oryza sativa ssp. japonica HOM05D006072 ORTHO05D007363 1.9e-06 57.0 139 29.5


User provided reference genes

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