Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.5e-92 342.8 170 100.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.3e-59 231.1 141 75.9
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.0e-57 226.1 140 75.0
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.9e-56 222.2 133 75.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.6e-54 216.5 136 72.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 8.0e-54 214.2 138 72.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.0e-53 213.8 134 70.9
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.8e-53 213.0 133 69.9
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.3e-53 212.6 135 72.6
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.0e-53 211.8 143 67.1
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.8e-53 211.1 150 66.0
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.8e-53 211.1 133 72.2
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 8.9e-53 210.7 133 70.7
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-52 210.3 138 71.0
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.5e-52 209.9 133 71.4
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.5e-52 209.9 138 68.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.0e-52 209.5 135 71.1
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.6e-52 209.1 141 68.8
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.4e-52 208.8 142 67.6
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 4.4e-52 208.4 142 67.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.4e-52 208.4 133 72.2
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.7e-52 208.0 138 67.4
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 5.7e-52 208.0 133 69.2
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 7.5e-52 207.6 133 69.9
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.5e-52 207.6 141 68.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 7.5e-52 207.6 133 69.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 7.5e-52 207.6 134 70.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.3e-51 206.8 136 68.4
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.3e-51 206.8 145 66.2
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.7e-51 206.5 134 68.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.7e-51 206.5 133 67.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.2e-51 206.1 134 68.7
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.2e-51 206.1 138 67.4
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.7e-51 205.3 135 68.1
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.7e-51 205.3 147 63.9
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 6.4e-51 204.5 133 69.2
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 4.1e-50 201.8 135 67.4
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 4.1e-50 201.8 142 69.0
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 4.1e-50 201.8 132 68.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 4.1e-50 201.8 133 66.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.1e-50 201.8 133 65.4
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 5.4e-50 201.4 133 67.7
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 7.0e-50 201.1 132 68.9
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 7.0e-50 201.1 152 63.2
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 9.2e-50 200.7 132 68.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.6e-49 199.9 132 68.2
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.6e-49 198.4 134 66.4
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 5.9e-49 198.0 138 64.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-48 196.8 134 65.7
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-48 196.8 134 65.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-48 196.8 134 65.7
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-48 196.8 134 65.7
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.3e-48 196.8 134 66.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-48 196.8 128 69.5
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.7e-48 196.4 134 65.7
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.9e-48 195.3 134 64.9
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 8.6e-48 194.1 133 65.4
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.5e-47 193.4 133 66.2
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.5e-47 193.4 132 66.7
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.5e-47 193.4 132 66.7
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.9e-47 193.0 134 64.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.5e-47 192.6 135 66.7
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 3.3e-47 192.2 137 67.2
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 4.3e-47 191.8 134 63.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 5.6e-47 191.4 134 64.9
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 5.6e-47 191.4 134 67.9
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 5.6e-47 191.4 136 64.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 9.5e-47 190.7 133 68.4
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 9.5e-47 190.7 140 63.6
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 9.5e-47 190.7 140 63.6
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.2e-46 190.3 116 74.1
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-46 189.9 137 63.5
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.6e-46 189.9 133 66.9
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-46 189.9 133 62.4
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.1e-46 189.5 136 64.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.1e-46 189.5 138 61.6
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.1e-46 189.5 138 61.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.1e-46 189.5 136 66.2
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.6e-46 188.7 133 64.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 6.2e-46 188.0 134 64.2
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 6.2e-46 188.0 136 63.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 8.0e-46 187.6 137 62.8
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 8.0e-46 187.6 116 71.6
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.4e-45 186.8 124 69.4
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.4e-45 186.8 124 69.4
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.8e-45 186.4 133 65.4
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.1e-45 185.7 138 64.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 5.2e-45 184.9 138 64.5
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.8e-45 184.5 136 65.4
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.8e-45 184.5 136 64.0
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 8.9e-45 184.1 124 68.5
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.2e-44 183.7 147 61.2
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-44 183.3 137 62.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-44 183.3 137 62.0
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.5e-44 183.3 134 64.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.6e-44 182.6 174 52.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 9.8e-44 180.6 145 57.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.2e-43 179.5 133 64.7
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 5.4e-42 174.9 132 60.6
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 9.2e-42 174.1 139 59.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.7e-41 172.6 116 66.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.7e-41 172.6 116 66.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 3.5e-41 172.2 107 69.2
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.0e-40 170.6 135 59.3
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 2.3e-40 169.5 131 61.8
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.3e-40 169.5 130 60.0
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 3.9e-40 168.7 132 58.3
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.6e-40 167.5 116 67.2
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.9e-39 166.4 130 60.8
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.9e-39 166.4 140 58.6
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 8.9e-37 157.5 114 66.7
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.5e-36 156.8 112 64.3
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.4e-36 155.6 133 54.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.3e-35 153.7 111 64.0
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.0e-32 142.5 120 55.8
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 6.6e-32 141.4 105 60.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.1e-31 140.6 89 73.0
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.5e-31 140.2 108 64.8
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.5e-31 140.2 118 54.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 2.5e-31 139.4 119 54.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 3.3e-31 139.0 124 55.6
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.8e-30 136.0 92 68.5
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.6e-30 135.6 114 54.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.8e-29 133.3 115 56.5
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 4.4e-28 128.6 85 67.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.1e-26 124.0 99 56.6
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.1e-26 122.1 83 63.9
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 2.8e-22 109.4 130 43.1
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.4e-18 96.3 90 48.9
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.4e-13 79.7 84 50.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.1e-13 79.3 53 66.0
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 7.9e-09 64.7 58 51.7


User provided reference genes

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