Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.4e-251 872.5 442 100.0
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.4e-187 659.8 433 75.8
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 8.7e-185 650.6 430 74.2
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.6e-170 602.1 417 72.4
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 6.3e-167 591.3 441 67.8
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 3.1e-166 589.0 429 66.4
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 6.9e-166 587.8 439 66.3
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 9.1e-166 587.4 433 66.3
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.2e-165 587.0 435 67.4
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.5e-165 586.6 419 68.0
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 7.7e-165 584.3 435 65.7
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.0e-164 583.9 432 66.4
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 6.5e-164 581.3 423 67.1
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 8.5e-164 580.9 407 69.5
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.9e-163 579.7 415 68.9
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.5e-163 579.3 407 69.0
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 2.5e-163 579.3 409 70.2
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.6e-162 576.6 416 68.0
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 4.7e-162 575.1 424 67.7
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 7.9e-162 574.3 523 58.3
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 1.0e-161 573.9 409 69.9
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 1.8e-161 573.2 408 69.4
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.8e-161 573.2 424 66.3
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 2.3e-161 572.8 443 66.6
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 3.9e-161 572.0 421 67.0
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 5.1e-161 571.6 403 69.2
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 5.1e-161 571.6 427 68.4
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.1e-161 571.6 421 67.9
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 5.1e-161 571.6 414 68.4
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 6.7e-161 571.2 420 68.8
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 6.7e-161 571.2 430 66.7
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 8.8e-161 570.9 417 68.3
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.1e-160 570.5 412 69.2
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 5.7e-160 568.2 428 66.1
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 7.4e-160 567.8 410 67.6
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 9.7e-160 567.4 418 67.5
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 9.7e-160 567.4 405 68.4
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 9.7e-160 567.4 432 66.2
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 6.3e-159 564.7 422 67.3
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 6.3e-159 564.7 422 67.3
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.1e-158 563.9 428 64.0
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 4.1e-158 562.0 425 65.4
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 9.1e-158 560.8 433 65.4
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 1.5e-157 560.1 435 63.9
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.5e-157 560.1 402 69.2
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 4.5e-157 558.5 409 67.2
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 4.5e-157 558.5 409 66.0
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.3e-156 557.0 423 66.2
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 1.7e-156 556.6 422 66.4
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 3.8e-156 555.4 430 64.7
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 8.5e-156 554.3 429 64.6
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.1e-155 553.9 418 66.3
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 4.2e-155 552.0 410 66.1
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 4.2e-155 552.0 490 58.4
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 7.2e-155 551.2 410 67.6
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.6e-154 550.1 429 65.5
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 6.1e-154 548.1 426 64.6
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 6.1e-154 548.1 414 66.7
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 1.8e-153 546.6 438 63.2
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 3.0e-153 545.8 425 63.3
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 3.9e-153 545.4 403 68.2
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 1.5e-152 543.5 423 64.1
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 4.4e-152 542.0 425 63.5
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 7.4e-152 541.2 437 62.0
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 9.7e-152 540.8 385 70.4
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.3e-151 540.4 393 67.7
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.7e-151 540.0 419 66.1
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 2.2e-151 539.7 426 64.3
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 3.7e-151 538.9 430 63.5
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 3.7e-151 538.9 416 65.4
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-150 537.3 423 64.8
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 1.4e-150 537.0 423 63.6
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 1.4e-150 537.0 437 63.4
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 1.8e-150 536.6 418 65.1
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 9.1e-150 534.3 384 66.9
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.6e-149 533.5 433 63.3
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.9e-149 531.6 421 62.7
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.9e-148 529.3 415 64.1
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 3.8e-148 528.9 419 64.2
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 8.5e-148 527.7 418 63.9
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 2.7e-146 522.7 423 61.9
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 3.6e-146 522.3 411 63.5
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 1.2e-144 517.3 427 61.8
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 1.5e-144 516.9 386 64.8
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 1.0e-140 504.2 364 68.1
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 3.2e-139 499.2 416 62.7
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 5.5e-139 498.4 408 64.7
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 2.0e-136 490.0 409 61.9
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 2.2e-135 486.5 406 61.3
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 2.2e-135 486.5 406 61.3
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 4.1e-134 482.3 408 60.5
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 7.0e-134 481.5 360 66.4
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.1e-131 474.2 344 69.8
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 4.2e-131 472.2 439 56.9
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 4.0e-129 465.7 434 57.8
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.9e-124 449.5 392 58.7
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.4e-121 440.7 335 66.3
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 5.8e-120 435.3 337 64.7
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 8.6e-116 421.4 420 55.0
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 1.3e-108 397.5 323 62.8
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 1.3e-103 380.9 321 62.6
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.3e-103 380.9 295 63.1
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.4e-102 377.5 396 53.3
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 7.6e-96 355.1 390 48.7
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.9e-95 353.2 256 71.1
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.2e-86 323.2 345 54.2
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.9e-79 299.3 203 72.4
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 1.6e-77 294.3 215 67.9
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 8.7e-76 288.5 381 44.4
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 6.5e-71 272.3 223 61.0
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 4.5e-64 249.6 386 39.1
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.5e-47 192.6 139 66.2
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.1e-46 191.8 120 73.3
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 9.7e-43 178.7 111 73.9
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.5e-40 169.9 123 65.9
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-38 165.2 123 64.2
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.6e-37 161.4 123 63.4
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 7.0e-33 146.0 103 64.1
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 9.1e-33 145.6 104 71.2
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 3.6e-29 133.7 91 65.9
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 6.1e-29 132.9 91 65.9
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.0e-23 115.5 84 61.9
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 3.2e-22 110.5 68 70.6
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 5.2e-20 103.2 68 67.6
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 2.0e-19 101.3 67 67.2
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.7e-19 99.8 91 56.0
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 5.4e-17 93.2 105 48.6
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 1.2e-16 92.0 49 79.6
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.0e-15 89.0 126 47.6
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.9e-15 87.4 107 46.7
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 2.5e-14 84.3 51 76.5
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 4.4e-11 73.6 41 80.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 5.7e-11 73.2 41 80.5


User provided reference genes

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