Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1178 Utricularia gibba HOM05D004153 ORTHO05D004678 3.9e-102 374.8 189 100.0
SalBow3G0249 Salvia bowleyana HOM05D004153 ORTHO05D004678 9.8e-61 237.3 161 68.9
Migut.D00197 Erythranthe guttata HOM05D004153 ORTHO05D004678 1.4e-59 233.4 191 61.3
Oeu030970.1 Olea europaea HOM05D004153 ORTHO05D004678 1.7e-57 226.5 198 59.1
Cc01_g20660 Coffea canephora HOM05D004153 ORTHO05D004678 1.9e-51 206.5 191 56.0
Nitab4.5_0000619g0070 Nicotiana tabacum HOM05D004153 ORTHO05D004678 2.1e-50 203.0 197 53.8
SGA_v2.0_scaffold2G01404 Striga asiatica HOM05D004153 ORTHO05D004678 3.5e-50 202.2 195 56.9
Peaxi162Scf00067g00254 Petunia axillaris HOM05D004153 ORTHO05D004678 6.0e-50 201.4 192 55.2
Nitab4.5_0003901g0020 Nicotiana tabacum HOM05D004153 ORTHO05D004678 3.9e-49 198.7 200 53.5
CAN.G339.31 Capsicum annuum HOM05D004153 ORTHO05D004678 1.2e-47 193.7 159 57.9
PGSC0003DMG400035200 Solanum tuberosum HOM05D004153 ORTHO05D004678 1.6e-47 193.4 204 51.5
Solyc09g074910.1 Solanum lycopersicum HOM05D004153 ORTHO05D004678 6.2e-47 191.4 199 51.3
Sopen09g029730 Solanum pennellii HOM05D004153 ORTHO05D004678 6.2e-47 191.4 199 51.8
Duzib138G0244 Durio zibethinus HOM05D004153 ORTHO05D004678 1.1e-43 180.6 162 53.1
Manes.05G063900 Manihot esculenta HOM05D004153 ORTHO05D004678 5.4e-43 178.3 187 47.1
TWI23G0022 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 1.2e-42 177.2 196 46.4
Manes.04G056100 Manihot esculenta HOM05D004153 ORTHO05D004678 2.7e-42 176.0 159 49.7
Gohir.A12G010800 Gossypium hirsutum HOM05D004153 ORTHO05D004678 4.6e-42 175.3 188 46.8
Sabra02G0153200 Salix brachista HOM05D004153 ORTHO05D004678 4.6e-42 175.3 164 49.4
Prupe.8G258500 Prunus persica HOM05D004153 ORTHO05D004678 6.0e-42 174.9 193 49.2
FAN15G2246 Fragaria x ananassa HOM05D000802 ORTHO05D001074 1.0e-41 174.1 188 47.3
COL.COLO4_23373 Corchorus olitorius HOM05D004153 ORTHO05D004678 1.3e-41 173.7 192 46.9
Lj3P816T18 Lonicera japonica HOM05D004153 ORTHO05D004678 1.3e-41 173.7 152 50.7
Gohir.D12G011200 Gossypium hirsutum HOM05D004153 ORTHO05D004678 1.7e-41 173.3 189 46.6
FAN15G0276 Fragaria x ananassa HOM05D004153 ORTHO05D004678 2.3e-41 172.9 188 47.9
Lj1g0005892 Lotus japonicus HOM05D004153 ORTHO05D004678 2.3e-41 172.9 188 45.2
Gorai.008G011200 Gossypium raimondii HOM05D004153 ORTHO05D004678 3.9e-41 172.2 188 45.7
TAR365G1014 Trochodendron aralioides HOM05D004153 ORTHO05D004678 3.9e-41 172.2 138 57.2
FAN27G1399 Fragaria x ananassa HOM05D004153 ORTHO05D004678 8.7e-41 171.0 185 47.0
Potri.014G131400 Populus trichocarpa HOM05D004153 ORTHO05D004678 1.1e-40 170.6 163 49.1
RcHm_v2.0_Chr6g0293581 Rosa chinensis HOM05D004153 ORTHO05D004678 3.3e-40 169.1 195 46.2
Potri.002G206100 Populus trichocarpa HOM05D004153 ORTHO05D004678 5.6e-40 168.3 196 43.9
Atru.chr5.1180 Acer truncatum HOM05D004153 ORTHO05D004678 1.6e-39 166.8 157 49.0
Ciclev10022120m.g Citrus clementina HOM05D004153 ORTHO05D004678 3.6e-39 165.6 158 51.9
Lj1C0T8 Lonicera japonica HOM05D004153 ORTHO05D004678 3.6e-39 165.6 160 49.4
FvH4_2g25400 Fragaria vesca HOM05D004153 ORTHO05D004678 4.7e-39 165.2 191 45.5
FAN24G2766 Fragaria x ananassa HOM05D004153 ORTHO05D004678 4.7e-39 165.2 191 45.5
Nn4g25841 Nelumbo nucifera HOM05D004153 ORTHO05D004678 4.7e-39 165.2 190 47.4
PSO675G8366 Papaver somniferum HOM05D004153 ORTHO05D004678 4.7e-39 165.2 190 45.3
QL12p027168 Quercus lobata HOM05D004153 ORTHO05D004678 4.7e-39 165.2 188 46.8
Lj3P819T20 Lonicera japonica HOM05D004153 ORTHO05D004678 6.2e-39 164.9 138 51.4
MD03G1285300 Malus domestica HOM05D004153 ORTHO05D004678 6.2e-39 164.9 183 48.1
PSO017G2667 Papaver somniferum HOM05D004153 ORTHO05D004678 2.4e-38 162.9 194 44.3
Glyma.03G213300 Glycine max HOM05D004153 ORTHO05D004678 5.3e-38 161.8 188 46.3
HanXRQChr10g0284631 Helianthus annuus HOM05D004153 ORTHO05D004678 9.0e-38 161.0 154 52.6
Ciclev10007035m.g Citrus clementina HOM05D004153 ORTHO05D004678 1.2e-37 160.6 166 47.0
Hma1.2p1_0209F.1_g088580 Hydrangea macrophylla HOM05D004153 ORTHO05D004678 1.2e-37 160.6 152 49.3
CiPaw.07G106600 Carya illinoinensis HOM05D004153 ORTHO05D004678 2.6e-37 159.5 164 48.2
Aqoxy2G02983 Aquilegia oxysepala HOM05D004153 ORTHO05D004678 4.4e-37 158.7 191 43.5
VMungo1383G3271 Vigna mungo HOM05D004153 ORTHO05D004678 4.4e-37 158.7 189 46.0
CANSAT78G0904 Cannabis sativa HOM05D004153 ORTHO05D004678 7.6e-37 157.9 187 46.5
MBI18_g21824_MAGBIO Magnolia biondii HOM05D004153 ORTHO05D004678 7.6e-37 157.9 186 44.6
PGR119G1654 Punica granatum HOM05D004153 ORTHO05D004678 7.6e-37 157.9 193 48.7
PGR119G2063 Punica granatum HOM05D004153 ORTHO05D004678 7.6e-37 157.9 193 48.7
RcHm_v2.0_Chr4g0422241 Rosa chinensis HOM05D004153 ORTHO05D004678 1.3e-36 157.1 193 42.0
arahy.Tifrunner.gnm1.ann1.3INE6D Arachis hypogaea HOM05D004153 ORTHO05D004678 1.7e-36 156.8 149 48.3
Lsat_1_v5_gn_5_190540 Lactuca sativa HOM05D004153 ORTHO05D004678 1.7e-36 156.8 158 47.5
FAN20G2301 Fragaria x ananassa HOM05D004153 ORTHO05D004678 2.2e-36 156.4 187 43.9
TWI53G1241 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 2.9e-36 156.0 169 43.8
Nn5g27910 Nelumbo nucifera HOM05D004153 ORTHO05D004678 3.8e-36 155.6 185 43.2
THA.LOC104802169 Tarenaya hassleriana HOM05D004153 ORTHO05D004678 4.9e-36 155.2 151 50.3
Psat3g022920 Pisum sativum HOM05D004153 ORTHO05D004678 8.4e-36 154.5 166 46.4
Phvul.001G205900 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 1.1e-35 154.1 189 43.9
Haze_04898 Corylus avellana HOM05D004153 ORTHO05D004678 1.9e-35 153.3 191 44.0
DCAR_002817 Daucus carota HOM05D004153 ORTHO05D004678 4.2e-35 152.1 156 48.1
Thecc.01G297300 Theobroma cacao HOM05D004153 ORTHO05D004678 4.2e-35 152.1 159 46.5
Lsat_1_v5_gn_9_1141 Lactuca sativa HOM05D004153 ORTHO05D004678 7.1e-35 151.4 159 45.9
HanXRQChr01g0001291 Helianthus annuus HOM05D004153 ORTHO05D004678 9.3e-35 151.0 174 43.7
Lalb_Chr18g0047121 Lupinus albus HOM05D004153 ORTHO05D004678 9.3e-35 151.0 206 41.7
Prupe.1G136800 Prunus persica HOM05D004153 ORTHO05D004678 1.2e-34 150.6 186 41.9
Cfa005949 Carpinus fangiana HOM05D004153 ORTHO05D004678 7.8e-34 147.9 128 50.8
Duzib052G0234 Durio zibethinus HOM05D004153 ORTHO05D004678 7.8e-34 147.9 187 43.9
AUR62033157 Chenopodium quinoa HOM05D004153 ORTHO05D004678 1.3e-33 147.1 190 43.2
AUR62033169 Chenopodium quinoa HOM05D004153 ORTHO05D004678 1.3e-33 147.1 190 43.2
Haze_01203 Corylus avellana HOM05D004153 ORTHO05D004678 1.7e-33 146.7 158 47.5
Lalb_Chr15g0078571 Lupinus albus HOM05D004153 ORTHO05D004678 1.7e-33 146.7 166 42.2
Thecc.04G284700 Theobroma cacao HOM05D004153 ORTHO05D004678 3.9e-33 145.6 168 45.2
CANSAT01G1893 Cannabis sativa HOM05D004153 ORTHO05D004678 5.1e-33 145.2 187 41.2
EL10Ac6g15659 Beta vulgaris HOM05D004153 ORTHO05D004678 6.6e-33 144.8 158 44.9
Lj6g0000547 Lotus japonicus HOM05D004153 ORTHO05D004678 3.3e-32 142.5 158 43.7
CSS0027100 Camellia sinensis var. sinensis HOM05D004153 ORTHO05D004678 5.6e-32 141.7 157 43.3
FAN07G0961 Fragaria x ananassa HOM05D004153 ORTHO05D004678 5.6e-32 141.7 183 41.0
Atru.chr4.2837 Acer truncatum HOM05D004153 ORTHO05D004678 9.6e-32 141.0 164 43.3
Ah.08g213200 Amaranthus hybridus HOM05D004153 ORTHO05D004678 9.6e-32 141.0 188 39.9
EL10Ac3g06596 Beta vulgaris HOM05D004153 ORTHO05D004678 1.3e-31 140.6 147 44.2
Medtr7g108650 Medicago truncatula HOM05D004153 ORTHO05D004678 1.6e-31 140.2 166 45.2
Cpa.g.sc9.210 Carica papaya HOM05D004153 ORTHO05D004678 2.1e-31 139.8 204 36.8
AUR62008617 Chenopodium quinoa HOM05D004153 ORTHO05D004678 4.8e-31 138.7 190 41.6
Phvul.009G248000 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 6.2e-31 138.3 163 41.1
TWI73G1192 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 1.1e-30 137.5 160 41.2
ClCG09G006030 Citrullus lanatus HOM05D004153 ORTHO05D004678 1.4e-30 137.1 184 40.8
Glyma.15G147800 Glycine max HOM05D004153 ORTHO05D004678 1.8e-30 136.7 157 41.4
Glyma.09G044900 Glycine max HOM05D004153 ORTHO05D004678 2.4e-30 136.3 164 40.2
TPR.G13834 Trifolium pratense HOM05D004153 ORTHO05D004678 2.4e-30 136.3 162 41.4
VMungo1309G0390 Vigna mungo HOM05D004153 ORTHO05D004678 9.0e-30 134.4 163 41.1
MELO3C006663.2 Cucumis melo HOM05D004153 ORTHO05D004678 9.9e-29 131.0 159 42.1
AL4G47340 Arabidopsis lyrata HOM05D004153 ORTHO05D004678 1.3e-28 130.6 195 38.5
CsaV3_3G014620 Cucumis sativus L. HOM05D004153 ORTHO05D004678 1.7e-28 130.2 163 41.7
Carub.0004s3048 Capsella rubella HOM05D004153 ORTHO05D004678 2.2e-28 129.8 194 38.1
AT2G47770 Arabidopsis thaliana HOM05D004153 ORTHO05D004678 3.8e-28 129.0 195 38.5
Psat1g153880 Pisum sativum HOM05D004153 ORTHO05D004678 3.8e-28 129.0 162 38.9
Gohir.D10G170400 Gossypium hirsutum HOM05D004153 ORTHO05D004678 6.4e-28 128.3 169 40.2
Eucgr.B01312 Eucalyptus grandis HOM05D004153 ORTHO05D004678 1.1e-27 127.5 151 39.1
Sed0018454 Sechium edule HOM05D004153 ORTHO05D004678 1.9e-27 126.7 156 42.9
Gorai.011G190200 Gossypium raimondii HOM05D004153 ORTHO05D004678 2.4e-27 126.3 169 39.6
Sed0010104 Sechium edule HOM05D004153 ORTHO05D004678 2.4e-27 126.3 151 42.4
Potri.010G025200 Populus trichocarpa HOM05D004153 ORTHO05D004678 3.2e-27 125.9 165 40.6
ATR0796G004 Amborella trichopoda HOM05D004153 ORTHO05D004678 4.2e-27 125.6 180 38.3
Sc13g0003480 Simmondsia chinensis HOM05D004153 ORTHO05D004678 4.2e-27 125.6 151 40.4
Gohir.A10G164100 Gossypium hirsutum HOM05D004153 ORTHO05D004678 5.4e-27 125.2 187 35.8
Lalb_Chr18g0051691 Lupinus albus HOM05D004153 ORTHO05D004678 7.1e-27 124.8 164 38.4
Rhsim04G0221600 Rhododendron simsii HOM05D004153 ORTHO05D004678 1.2e-26 124.0 147 44.2
PGR031G1230 Punica granatum HOM05D004153 ORTHO05D004678 2.1e-26 123.2 175 37.1
CARHR143140 Cardamine hirsuta HOM05D004153 ORTHO05D004678 2.7e-26 122.9 195 36.4
Aa31LG1G29110 Aethionema arabicum HOM05D004153 ORTHO05D004678 4.6e-26 122.1 197 35.5
MD11G1304700 Malus domestica HOM05D004153 ORTHO05D004678 4.6e-26 122.1 103 51.5
Sed0026977 Sechium edule HOM05D004153 ORTHO05D004678 1.8e-25 120.2 186 37.1
Thhalv10001647m.g Eutrema salsugineum HOM05D004153 ORTHO05D004678 3.0e-25 119.4 192 35.9
MELO3C016017.2 Cucumis melo HOM05D004153 ORTHO05D004678 3.9e-25 119.0 185 38.9
BraA04t18942Z Brassica rapa HOM05D004153 ORTHO05D004678 6.7e-25 118.2 195 35.4
Sp4g29700 Schrenkiella parvula HOM05D004153 ORTHO05D004678 6.7e-25 118.2 193 34.7
A04p35060 Brassica napus HOM05D004153 ORTHO05D004678 1.1e-24 117.5 195 34.9
BolC4t28778H Brassica oleracea HOM05D004153 ORTHO05D004678 1.5e-24 117.1 196 34.7
C04p00110 Brassica napus HOM05D004153 ORTHO05D004678 7.4e-24 114.8 190 37.9
Medtr2g436790 Medicago truncatula HOM05D004153 ORTHO05D004678 1.3e-23 114.0 166 36.1
Actinidia24837 Actinidia chinensis HOM05D004153 ORTHO05D004678 1.6e-23 113.6 110 45.5
BcaC02g06991 Brassica carinata HOM05D004153 ORTHO05D004678 2.8e-23 112.8 197 35.5
C04p72970 Brassica napus HOM05D004153 ORTHO05D004678 2.8e-23 112.8 197 35.5
BcaC02g12543 Brassica carinata HOM05D004153 ORTHO05D004678 4.8e-23 112.1 157 38.9
BolC4t21658H Brassica oleracea HOM05D004153 ORTHO05D004678 8.1e-23 111.3 190 36.8
HPP92_016940 Vanilla planifolia HOM05D004153 ORTHO05D004678 1.8e-22 110.2 183 35.0
Ca_01937_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 3.1e-22 109.4 116 43.1
Rhsim01G0283900 Rhododendron simsii HOM05D004153 ORTHO05D004678 4.0e-22 109.0 159 38.4
BcaB06g29496 Brassica carinata HOM05D004153 ORTHO05D004678 1.2e-21 107.5 153 36.6
BcaB06g29494 Brassica carinata HOM05D004153 ORTHO05D004678 4.5e-21 105.5 198 32.3
BcaB06g29497 Brassica carinata HOM05D004153 ORTHO05D004678 4.5e-21 105.5 198 32.3
BraA05t19015Z Brassica rapa HOM05D004153 ORTHO05D004678 4.5e-21 105.5 197 35.0
CsaV3_7G029110 Cucumis sativus L. HOM05D004153 ORTHO05D004678 4.5e-21 105.5 115 42.6
A05p00190 Brassica napus HOM05D004153 ORTHO05D004678 3.8e-20 102.4 197 34.5
Sabra10G0013900 Salix brachista HOM05D004153 ORTHO05D004678 3.8e-20 102.4 153 40.5
Manes.03G195100 Manihot esculenta HOM05D004153 ORTHO05D004678 4.9e-20 102.1 145 35.9
CDE02G0764 Ceratophyllum demersum HOM05D004153 ORTHO05D004678 6.4e-20 101.7 153 37.3
SEGI_18828 Sequoiadendron giganteum HOM05D004153 ORTHO05D004678 4.2e-19 99.0 156 35.9
CBR_g30074 Chara braunii HOM05D004153 ORTHO05D004678 3.5e-18 95.9 141 33.3
Os05g0151200 Oryza sativa ssp. japonica HOM05D004153 ORTHO05D004678 3.5e-18 95.9 186 33.3
BcaB02g08747 Brassica carinata HOM05D004153 ORTHO05D004678 1.8e-17 93.6 157 36.3
Lj1C32T8 Lonicera japonica HOM05D004153 ORTHO05D004678 1.9e-16 90.1 185 33.0
Zm00001eb354150 Zea mays HOM05D004153 ORTHO05D004678 9.6e-16 87.8 107 42.1
AagrBONN_evm.TU.Sc2ySwM_362.296 Anthoceros agrestis HOM05D004153 ORTHO05D004678 1.3e-15 87.4 158 35.4
SMO115G0169 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 2.8e-15 86.3 129 35.7
ECA248G0131 Erigeron canadensis HOM05D004153 ORTHO05D004678 3.4e-13 79.3 97 40.2
Pp3c24_14170 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.7e-12 77.0 154 35.7
Mapoly0050s0023 Marchantia polymorpha HOM05D004153 ORTHO05D004678 8.4e-12 74.7 176 33.0
Dinv19716 Davidia involucrata HOM05D004153 ORTHO05D004678 1.9e-11 73.6 184 33.7
Pp3c10_6760 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.9e-11 73.6 172 32.0
Pp3c2_17540 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.9e-11 73.6 158 31.6
AagrBONN_evm.TU.Sc2ySwM_117.3397 Anthoceros agrestis HOM05D004153 ORTHO05D004678 4.2e-11 72.4 135 33.3
SMO144G0096 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 9.3e-11 71.2 116 31.9
Pp3c26_2060 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.2e-10 70.9 121 30.6
Pp3c4_22190 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.2e-10 70.9 143 30.8
Mapoly0003s0268 Marchantia polymorpha HOM05D004153 ORTHO05D004678 1.6e-10 70.5 149 28.2
Rhsim09G0027200 Rhododendron simsii HOM05D041434 ORTHO05D004678 6.1e-10 68.6 140 33.6
Actinidia21057 Actinidia chinensis HOM05D004153 ORTHO05D004678 1.0e-09 67.8 161 31.7
Rhsim07G0194500 Rhododendron simsii HOM05D035787 ORTHO05D004678 6.7e-09 65.1 137 32.8
SMO340G0010 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 7.4e-08 61.6 119 31.9
Rhsim07G0178900 Rhododendron simsii HOM05D035787 ORTHO05D004678 6.9e-06 55.1 151 28.5
RhsimUnG0080000 Rhododendron simsii HOM05D035787 ORTHO05D004678 6.9e-06 55.1 151 28.5


User provided reference genes

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