Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.9e-135 485.7 224 100.0
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.4e-90 335.9 217 69.1
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 7.0e-90 334.3 218 68.3
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.6e-89 333.2 234 66.7
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-89 333.2 215 69.8
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.0e-89 332.8 234 65.8
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 3.5e-89 332.0 222 67.1
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 5.9e-89 331.3 215 68.8
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 2.3e-88 329.3 215 67.0
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 2.9e-88 328.9 215 68.4
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.8e-88 328.6 221 68.3
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 8.6e-88 327.4 221 67.4
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.1e-87 327.0 220 67.3
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.9e-87 326.2 219 67.1
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 9.5e-87 323.9 223 65.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 9.5e-87 323.9 230 65.7
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.2e-86 323.6 217 65.9
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-86 323.6 215 68.4
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-86 323.6 215 68.4
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-86 323.2 220 68.6
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 4.7e-86 321.6 227 64.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 6.1e-86 321.2 222 64.9
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.0e-85 320.5 222 64.9
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.4e-85 320.1 227 64.8
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.4e-85 320.1 222 67.1
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.4e-85 320.1 220 66.4
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.8e-85 319.7 219 65.3
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.3e-85 319.3 216 68.1
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 2.3e-85 319.3 223 65.9
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 2.3e-85 319.3 219 67.1
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 3.0e-85 318.9 219 64.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 4.0e-85 318.5 226 65.5
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 4.0e-85 318.5 222 65.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 8.9e-85 317.4 214 65.9
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.2e-84 317.0 221 65.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.5e-84 316.6 214 65.9
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.5e-84 316.6 224 66.5
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.0e-84 316.2 214 65.4
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 2.0e-84 316.2 231 64.9
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.6e-84 315.8 217 65.0
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 3.4e-84 315.5 218 64.7
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 4.4e-84 315.1 226 62.8
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.7e-83 313.2 221 65.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.7e-83 313.2 215 68.4
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.9e-83 312.4 215 65.1
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 3.7e-83 312.0 215 65.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 6.4e-83 311.2 215 65.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 6.4e-83 311.2 225 64.0
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 6.4e-83 311.2 217 64.1
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 8.3e-83 310.8 220 63.6
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.1e-82 310.5 226 63.7
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.4e-82 310.1 232 62.1
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.8e-82 309.7 217 61.8
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.4e-82 309.3 218 63.8
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.2e-82 308.9 225 63.1
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.2e-82 308.9 222 63.5
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 4.1e-82 308.5 219 65.3
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.2e-81 307.0 225 65.8
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.6e-81 306.6 225 64.0
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.6e-81 306.6 214 65.9
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.6e-81 306.6 264 54.9
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.0e-81 306.2 218 63.8
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 2.7e-81 305.8 225 63.1
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.0e-80 303.9 221 61.5
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.3e-80 302.8 225 61.8
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.9e-80 302.0 219 63.0
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 6.6e-80 301.2 226 62.8
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.6e-80 301.2 222 63.1
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.9e-79 299.7 217 62.7
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 4.3e-79 298.5 216 62.5
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 4.3e-79 298.5 223 58.7
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.8e-78 295.8 297 50.5
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.2e-78 294.7 222 62.2
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 8.0e-78 294.3 226 59.7
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.8e-77 293.1 234 60.7
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.6e-76 289.3 183 69.9
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 5.8e-76 288.1 228 60.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.2e-74 282.3 191 66.5
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 9.2e-74 280.8 191 67.0
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-73 280.4 189 68.3
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.7e-73 279.3 190 67.4
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.7e-73 279.3 191 66.5
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.1e-71 273.9 195 64.1
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.5e-71 273.5 263 51.3
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.9e-71 273.1 199 63.3
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.3e-71 271.9 226 56.2
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 9.5e-71 270.8 200 62.0
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.2e-70 270.4 192 64.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 8.1e-70 267.7 238 55.0
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.3e-69 266.2 193 61.7
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.3e-69 266.2 219 60.3
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.6e-68 262.7 183 65.6
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 4.4e-68 261.9 183 65.0
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 7.5e-68 261.2 186 62.4
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 9.8e-68 260.8 187 64.2
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.6e-65 253.4 185 62.2
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.7e-65 252.7 219 57.1
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.7e-65 252.7 219 57.1
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.7e-65 252.7 215 52.6
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 3.5e-65 252.3 183 60.1
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.6e-65 251.9 187 62.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 4.6e-65 251.9 188 61.2
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.3e-64 250.4 191 60.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 2.8e-62 242.7 187 61.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 2.8e-62 242.7 187 61.0
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.4e-61 240.4 205 57.6
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.4e-58 230.3 226 51.3
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 6.0e-57 224.9 217 53.5
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.0e-56 224.2 190 54.2
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 8.9e-53 211.1 197 50.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.9e-50 203.4 217 44.7
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 7.3e-47 191.4 156 57.7
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 8.1e-46 188.0 140 60.0
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.4e-45 186.4 127 63.8
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.3e-32 144.1 86 65.1
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 3.9e-32 142.5 81 69.1
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 6.5e-19 98.6 190 34.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 6.1e-09 65.5 62 40.3


User provided reference genes

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