Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1150 Utricularia gibba HOM05D004137 ORTHO05D004804 1.5e-56 222.6 111 100.0
Migut.N00553 Erythranthe guttata HOM05D004137 ORTHO05D004804 1.6e-18 96.3 82 59.8
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 2.6e-13 79.0 81 46.9
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 3.4e-13 78.6 67 53.7
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 4.5e-13 78.2 67 56.7
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 5.9e-13 77.8 67 53.7
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 7.6e-13 77.4 66 54.5
SGA_v2.0_scaffold3G01677 Striga asiatica HOM05D004137 ORTHO05D004804 2.2e-12 75.9 61 55.7
Lsat_1_v5_gn_1_68820 Lactuca sativa HOM05D004137 ORTHO05D004804 3.8e-12 75.1 106 42.5
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 1.1e-11 73.6 59 57.6
HanXRQChr01g0021421 Helianthus annuus HOM05D004137 ORTHO05D004804 1.4e-11 73.2 62 53.2
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 1.4e-11 73.2 81 45.7
FAN16G1350 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.5e-11 72.4 67 52.2
FAN21G2465 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.5e-11 72.4 67 52.2
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 4.2e-11 71.6 79 44.3
Nitab4.5_0000528g0100 Nicotiana tabacum HOM05D004137 ORTHO05D004804 4.2e-11 71.6 66 50.0
Nitab4.5_0005935g0010 Nicotiana tabacum HOM05D004137 ORTHO05D004804 4.2e-11 71.6 66 50.0
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 5.5e-11 71.2 81 45.7
ECA248G0157 Erigeron canadensis HOM05D004137 ORTHO05D004804 7.2e-11 70.9 119 41.2
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 7.2e-11 70.9 79 44.3
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 9.4e-11 70.5 65 50.8
Lsat_1_v5_gn_2_50221 Lactuca sativa HOM05D004137 ORTHO05D004804 9.4e-11 70.5 84 40.5
FAN25G2990 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.2e-10 70.1 67 50.7
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla HOM05D004137 ORTHO05D004804 1.2e-10 70.1 68 48.5
RcHm_v2.0_Chr5g0083831 Rosa chinensis HOM05D004137 ORTHO05D004804 1.2e-10 70.1 67 49.3
Cc01_g00130 Coffea canephora HOM05D004137 ORTHO05D004804 1.6e-10 69.7 70 45.7
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 2.1e-10 69.3 82 48.8
FAN11G0915 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.1e-10 69.3 61 55.7
Potri.003G221500 Populus trichocarpa HOM05D004137 ORTHO05D004804 2.1e-10 69.3 63 50.8
Ciclev10017215m.g Citrus clementina HOM05D004137 ORTHO05D004804 2.7e-10 68.9 64 53.1
FvH4_3g45760 Fragaria vesca HOM05D004137 ORTHO05D004804 4.6e-10 68.2 61 54.1
Potri.001G003500 Populus trichocarpa HOM05D004137 ORTHO05D004804 4.6e-10 68.2 63 50.8
DCAR_023854 Daucus carota HOM05D004137 ORTHO05D004804 6.1e-10 67.8 77 48.1
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.0e-09 67.0 79 44.3
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 1.4e-09 66.6 66 48.5
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.4e-09 66.6 79 44.3
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 1.4e-09 66.6 69 47.8
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 2.3e-09 65.9 78 43.6
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 3.0e-09 65.5 69 46.4
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 3.9e-09 65.1 70 48.6
Manes.15G109500 Manihot esculenta HOM05D004137 ORTHO05D004804 3.9e-09 65.1 113 39.8
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 3.9e-09 65.1 66 47.0
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 5.1e-09 64.7 65 46.2
PGSC0003DMG400037247 Solanum tuberosum HOM05D004137 ORTHO05D004804 5.1e-09 64.7 65 46.2
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 5.1e-09 64.7 67 44.8
Aa31LG3G12400 Aethionema arabicum HOM05D004137 ORTHO05D004804 8.8e-09 63.9 106 38.7
Gohir.D12G178750 Gossypium hirsutum HOM05D004137 ORTHO05D004804 8.8e-09 63.9 70 44.3
Gorai.008G191500 Gossypium raimondii HOM05D004137 ORTHO05D004804 1.1e-08 63.5 73 42.5
HanXRQChr02g0057501 Helianthus annuus HOM05D004137 ORTHO05D004804 1.1e-08 63.5 68 42.6
QL04p040762 Quercus lobata HOM05D004137 ORTHO05D004804 1.1e-08 63.5 53 50.9
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.9e-08 62.8 100 37.0
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 1.9e-08 62.8 65 44.6
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 1.9e-08 62.8 74 40.5
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 2.5e-08 62.4 96 40.6
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 3.3e-08 62.0 66 45.5
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 4.3e-08 61.6 66 45.5
Sopen06g023090 Solanum pennellii HOM05D004137 ORTHO05D004804 4.3e-08 61.6 86 41.9
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 5.7e-08 61.2 71 40.8
Solyc06g064610.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 5.7e-08 61.2 62 46.8
BraA01t01711Z Brassica rapa HOM05D004137 ORTHO05D004804 9.7e-08 60.5 101 36.6
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 9.7e-08 60.5 69 42.0
Solyc11g042440.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 9.7e-08 60.5 65 44.6
PGSC0003DMG400033149 Solanum tuberosum HOM05D004137 ORTHO05D004804 9.7e-08 60.5 83 43.4
Sopen11g018520 Solanum pennellii HOM05D004137 ORTHO05D004804 1.3e-07 60.1 65 44.6
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 2.2e-07 59.3 69 42.0
BcaC05g29894 Brassica carinata HOM05D004137 ORTHO05D004804 2.8e-07 58.9 63 46.0
BolC5t34968H Brassica oleracea HOM05D004137 ORTHO05D004804 2.8e-07 58.9 63 46.0
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 3.7e-07 58.5 69 40.6
BcaC05g30244 Brassica carinata HOM05D004137 ORTHO05D004804 3.7e-07 58.5 63 46.0
BcaC05g30291 Brassica carinata HOM05D004137 ORTHO05D004804 3.7e-07 58.5 63 46.0
A05p43490 Brassica napus HOM05D004137 ORTHO05D004804 3.7e-07 58.5 63 46.0
BraA05t23089Z Brassica rapa HOM05D004137 ORTHO05D004804 3.7e-07 58.5 63 46.0
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 4.8e-07 58.2 69 40.6
Carub.0003s0313 Capsella rubella HOM05D004137 ORTHO05D004804 6.3e-07 57.8 58 48.3
Cpa.g.sc51.119 Carica papaya HOM05D004137 ORTHO05D004804 6.3e-07 57.8 70 44.3
Ciclev10023092m.g Citrus clementina HOM05D004137 ORTHO05D004804 6.3e-07 57.8 58 48.3
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 8.2e-07 57.4 71 39.4
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 8.2e-07 57.4 71 39.4
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 8.2e-07 57.4 71 39.4
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 8.2e-07 57.4 101 39.6
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 8.2e-07 57.4 61 50.8
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 1.1e-06 57.0 122 32.0
Eucgr.B03601 Eucalyptus grandis HOM05D004137 ORTHO05D004804 1.1e-06 57.0 63 46.0
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.4e-06 56.6 87 37.9
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 2.4e-06 55.8 113 31.9
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 2.4e-06 55.8 113 31.9
BcaC03g14217 Brassica carinata HOM05D004137 ORTHO05D004804 3.1e-06 55.5 66 42.4
C02p15170 Brassica napus HOM05D004137 ORTHO05D004804 3.1e-06 55.5 66 42.4
C03p15600 Brassica napus HOM05D004137 ORTHO05D004804 3.1e-06 55.5 61 42.6
BolC3t13997H Brassica oleracea HOM05D004137 ORTHO05D004804 3.1e-06 55.5 61 42.6
Prupe.7G004500 Prunus persica HOM05D004137 ORTHO05D004804 3.1e-06 55.5 50 54.0
AT5G56520 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 4.1e-06 55.1 68 41.2
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 5.3e-06 54.7 69 37.7
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 5.3e-06 54.7 69 37.7
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 6.9e-06 54.3 71 38.0
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 6.9e-06 54.3 71 38.0
PGR102G2770 Punica granatum HOM05D004137 ORTHO05D004804 6.9e-06 54.3 114 37.7
AL8G32280 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 9.1e-06 53.9 68 41.2


User provided reference genes

Program Settings