Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 7.3e-65 250.8 160 100.0
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 3.9e-34 148.7 176 50.6
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 3.6e-32 142.1 180 53.9
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 4.5e-30 135.2 179 48.0
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 7.6e-30 134.4 131 58.0
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 9.9e-30 134.0 166 48.8
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 9.9e-30 134.0 122 78.7
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.7e-29 133.3 173 47.4
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 3.8e-29 132.1 133 62.4
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 3.8e-29 132.1 183 46.4
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 6.4e-29 131.3 168 53.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 8.4e-29 131.0 177 50.3
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.4e-28 130.2 179 48.6
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.9e-28 129.8 183 48.1
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 3.2e-28 129.0 129 57.4
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 3.2e-28 129.0 155 51.6
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 4.2e-28 128.6 180 48.3
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 4.2e-28 128.6 131 55.7
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 7.1e-28 127.9 180 45.0
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 7.1e-28 127.9 173 48.6
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.2e-27 127.1 168 50.0
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.6e-27 126.7 125 56.0
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.1e-27 126.3 125 57.6
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 2.1e-27 126.3 167 50.3
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 3.5e-27 125.6 170 48.8
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.5e-27 125.6 125 56.0
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.5e-27 125.6 179 45.8
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 4.6e-27 125.2 128 56.2
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 6.0e-27 124.8 177 50.3
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 6.0e-27 124.8 182 60.4
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 7.9e-27 124.4 162 53.7
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.0e-26 124.0 131 53.4
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.0e-26 124.0 165 49.7
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 1.0e-26 124.0 174 48.3
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.3e-26 123.6 178 46.1
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.3e-26 123.6 123 56.1
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.8e-26 123.2 125 56.8
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.8e-26 123.2 143 53.1
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.8e-26 123.2 123 56.1
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 2.3e-26 122.9 175 48.0
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 2.3e-26 122.9 123 56.1
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 3.0e-26 122.5 158 51.9
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.0e-26 122.5 175 48.0
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 3.0e-26 122.5 168 48.8
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.9e-26 122.1 124 58.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 6.7e-26 121.3 157 51.0
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 8.7e-26 120.9 123 54.5
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 1.1e-25 120.6 178 46.6
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.5e-25 120.2 169 50.9
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.9e-25 119.8 119 57.1
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 2.5e-25 119.4 127 55.9
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.3e-25 119.0 137 51.8
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 9.6e-25 117.5 127 54.3
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.6e-24 116.7 180 53.3
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 3.7e-24 115.5 183 53.0
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 8.1e-24 114.4 155 50.3
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.1e-23 114.0 119 56.3
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.1e-23 114.0 182 44.5
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 5.3e-23 111.7 183 44.8
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 6.9e-23 111.3 144 61.1
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 9.0e-23 110.9 179 44.7
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.3e-21 107.1 130 55.4
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.2e-21 106.3 123 48.8
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 6.4e-21 104.8 165 49.1
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.1e-20 104.0 123 50.4
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 1.9e-20 103.2 112 55.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.2e-19 100.5 125 50.4
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 1.2e-19 100.5 123 48.0
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.6e-19 100.1 123 48.8
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 1.6e-19 100.1 123 48.8
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.6e-19 100.1 123 48.8
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.6e-19 100.1 123 48.8
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 1.6e-19 100.1 123 48.8
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 2.1e-19 99.8 123 48.8
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 2.1e-19 99.8 123 45.5
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 2.7e-19 99.4 124 48.4
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.6e-19 98.6 124 49.2
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 7.9e-19 97.8 124 48.4
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 2.3e-18 96.3 185 41.1
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 6.7e-18 94.7 149 44.3
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 4.3e-17 92.0 172 42.4
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 5.6e-17 91.7 171 42.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 9.6e-17 90.9 125 47.2
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 9.6e-17 90.9 154 45.5
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.6e-16 90.1 193 37.3
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.8e-16 89.4 171 50.3
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 3.7e-16 89.0 140 47.1
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 6.2e-16 88.2 150 45.3
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.1e-15 87.4 125 43.2
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 2.4e-15 86.3 178 43.3
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.1e-15 85.9 173 42.2
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 3.1e-15 85.9 171 46.2
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 4.0e-15 85.5 151 53.0
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 5.3e-15 85.1 132 49.2
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 6.9e-15 84.7 151 53.0
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.4e-14 82.4 175 46.9
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.0e-13 80.9 154 51.9
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.5e-12 76.3 147 53.7
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 3.2e-12 75.9 164 48.2
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.2e-12 75.5 124 50.8
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 7.1e-12 74.7 124 41.9
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 1.6e-11 73.6 136 36.8
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 7.9e-11 71.2 180 42.8
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 4.5e-06 55.5 150 33.3
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 4.5e-06 55.5 86 67.4


User provided reference genes

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