Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 2.2e-263 911.8 458 100.0
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 1.1e-70 271.6 572 34.6
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 5.0e-58 229.6 578 32.2
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 1.1e-57 228.4 581 32.7
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 2.5e-57 227.3 579 32.0
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 2.5e-57 227.3 572 31.5
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 2.7e-56 223.8 574 31.9
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 4.7e-56 223.0 569 32.3
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 6.1e-56 222.6 549 32.2
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 1.4e-55 221.5 569 32.2
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 1.8e-55 221.1 569 32.0
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 1.8e-55 221.1 578 32.2
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 5.7e-54 216.1 573 32.6
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 2.8e-53 213.8 652 29.0
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 6.3e-53 212.6 576 32.1
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 8.2e-53 212.2 581 31.5
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 1.1e-52 211.8 578 31.5
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 1.1e-52 211.8 573 31.9
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 2.4e-52 210.7 558 30.8
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 3.1e-52 210.3 579 30.9
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 7.0e-52 209.1 571 30.8
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 9.1e-52 208.8 597 30.2
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 1.2e-51 208.4 587 31.2
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 7.7e-51 205.7 607 29.8
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 1.0e-50 205.3 576 31.4
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.9e-49 201.1 595 30.3
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 2.5e-49 200.7 586 29.9
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 5.5e-49 199.5 591 30.5
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 7.2e-49 199.1 584 30.5
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 9.4e-49 198.7 579 28.8
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.2e-48 198.4 628 28.7
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 3.6e-48 196.8 568 29.9
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 6.1e-48 196.1 558 29.7
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 6.1e-48 196.1 577 30.2
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 1.0e-47 195.3 582 30.6
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 2.3e-47 194.1 563 30.0
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 3.0e-47 193.7 589 30.9
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 6.7e-47 192.6 620 28.9
Manes.05G081900 Manihot esculenta HOM05D004978 ORTHO05D005621 6.7e-47 192.6 339 36.6
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 1.1e-46 191.8 497 30.6
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 1.5e-46 191.4 491 29.9
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 2.0e-46 191.0 557 30.5
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 2.6e-46 190.7 645 28.5
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 2.2e-45 187.6 571 28.2
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 1.1e-44 185.3 523 30.6
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 1.4e-44 184.9 553 28.4
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.4e-44 184.9 653 27.3
Actinidia24924 Actinidia chinensis HOM05D004978 ORTHO05D005621 2.4e-44 184.1 335 38.5
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 3.1e-44 183.7 594 29.0
RcHm_v2.0_Chr6g0289911 Rosa chinensis HOM05D004978 ORTHO05D005621 3.1e-44 183.7 342 35.7
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 4.1e-44 183.3 595 28.7
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 4.1e-44 183.3 515 30.7
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 5.3e-44 183.0 572 27.6
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 7.0e-44 182.6 588 27.9
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 1.6e-43 181.4 562 29.2
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 3.5e-43 180.3 492 30.5
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 7.7e-43 179.1 600 28.7
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 2.9e-42 177.2 559 29.9
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 6.5e-42 176.0 550 28.0
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 8.5e-42 175.6 583 25.9
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 1.5e-41 174.9 564 27.3
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 1.9e-41 174.5 619 27.9
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 1.6e-40 171.4 325 36.9
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 3.6e-40 170.2 563 27.0
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 8.0e-40 169.1 559 26.7
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 1.8e-39 167.9 563 27.5
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 2.3e-39 167.5 563 26.8
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 5.2e-39 166.4 568 27.5
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 6.7e-39 166.0 563 26.8
GSVIVG01003120001 Vitis vinifera HOM05D004978 ORTHO05D005621 8.8e-39 165.6 242 42.6
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 1.5e-38 164.9 573 28.1
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 2.0e-38 164.5 481 29.9
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 7.5e-38 162.5 328 35.7
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 9.7e-38 162.2 557 29.8
TWI12G0244 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 1.3e-37 161.8 291 36.4
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 1.7e-37 161.4 544 28.7
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 2.2e-37 161.0 588 26.0
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 9.1e-36 155.6 574 27.0
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 4.5e-35 153.3 490 30.8
Sc05g0001300 Simmondsia chinensis HOM05D004978 ORTHO05D005621 1.0e-34 152.1 205 42.4
PGSC0003DMG400019310 Solanum tuberosum HOM05D004978 ORTHO05D005621 6.5e-34 149.4 230 39.1
Zm00001eb370120 Zea mays HOM05D004978 ORTHO05D005621 1.9e-33 147.9 326 33.4
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 3.2e-33 147.1 558 27.2
Lj2A1164T58 Lonicera japonica HOM05D004978 ORTHO05D005621 7.2e-33 146.0 194 44.8
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 9.4e-33 145.6 547 27.1
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 1.8e-31 141.4 294 32.3
MD03G1258100 Malus domestica HOM05D004978 ORTHO05D005621 4.0e-31 140.2 199 42.2
VMungo0720G1640 Vigna mungo HOM05D004978 ORTHO05D005621 5.2e-31 139.8 199 40.7
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 2.0e-30 137.9 460 30.7
Cpa.g.sc52.118 Carica papaya HOM05D004978 ORTHO05D005621 2.6e-30 137.5 192 42.2
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 8.3e-29 132.5 477 29.4
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 1.5e-25 121.7 302 30.5
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.5e-25 120.9 306 33.7
TAR636G2873 Trochodendron aralioides HOM05D004978 ORTHO05D005621 2.5e-25 120.9 89 66.3
Carub.0006s1819 Capsella rubella HOM05D004978 ORTHO05D005621 2.8e-24 117.5 226 34.5
HPP92_022057 Vanilla planifolia HOM05D004978 ORTHO05D005621 2.8e-24 117.5 195 35.4
Glyma.02G144333 Glycine max HOM05D004978 ORTHO05D005621 1.8e-23 114.8 87 59.8
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 8.9e-23 112.5 308 30.8
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 1.7e-21 108.2 284 31.3
TPR.G34891 Trifolium pratense HOM05D004978 ORTHO05D005621 7.8e-19 99.4 74 60.8
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 2.9e-18 97.4 318 25.8
MD03G1258000 Malus domestica HOM05D004978 ORTHO05D005621 4.3e-17 93.6 294 30.3
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 6.8e-15 86.3 290 27.6
Lalb_Chr06g0162781 Lupinus albus HOM05D004978 ORTHO05D005621 1.2e-14 85.5 64 57.8
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 9.8e-14 82.4 138 37.7
PGSC0003DMG400019309 Solanum tuberosum HOM05D004978 ORTHO05D005621 1.3e-13 82.0 303 29.4
TAR636G0163 Trochodendron aralioides HOM05D004978 ORTHO05D005621 1.3e-13 82.0 298 26.8
SEGI_31795 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 2.9e-13 80.9 70 51.4
Sc05g0001310 Simmondsia chinensis HOM05D004978 ORTHO05D005621 1.3e-10 72.0 294 27.2
EL10Ac5g10492 Beta vulgaris HOM05D004978 ORTHO05D005621 6.6e-10 69.7 296 26.0
GSVIVG01003121001 Vitis vinifera HOM05D004978 ORTHO05D005621 1.9e-09 68.2 296 26.4
Sabra05G0164500 Salix brachista HOM05D004978 ORTHO05D005621 2.5e-09 67.8 171 31.0
Cpa.g.sc52.119 Carica papaya HOM05D004978 ORTHO05D005621 5.6e-09 66.6 162 32.1
HPP92_027617 Vanilla planifolia HOM05D004978 ORTHO05D005621 6.2e-08 63.2 304 25.7
VMungo0720G1803 Vigna mungo HOM05D004978 ORTHO05D005621 1.8e-07 61.6 177 30.5
Potri.002G047875 Populus trichocarpa HOM05D004978 ORTHO05D005621 6.8e-07 59.7 115 31.3
CSS0038001 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 3.4e-06 57.4 53 50.9


User provided reference genes

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