Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1122 Utricularia gibba HOM05D002549 ORTHO05D002755 4.5e-49 197.6 98 100.0
SGA_v2.0_scaffold37G14785 Striga asiatica HOM05D002549 ORTHO05D002755 8.0e-14 80.5 101 49.5
Sed0016403 Sechium edule HOM05D002549 ORTHO05D002755 2.3e-13 79.0 110 44.5
PGR102G2540 Punica granatum HOM05D002549 ORTHO05D002755 4.0e-13 78.2 125 43.2
arahy.Tifrunner.gnm1.ann1.62RLPM Arachis hypogaea HOM05D002549 ORTHO05D002755 5.2e-13 77.8 100 46.0
ClCG07G012770 Citrullus lanatus HOM05D002549 ORTHO05D002755 1.2e-12 76.6 111 45.0
Migut.D01057 Erythranthe guttata HOM05D002549 ORTHO05D002755 2.6e-12 75.5 136 41.9
Glyma.07G031900 Glycine max HOM05D002549 ORTHO05D002755 5.7e-12 74.3 108 42.6
Actinidia26401 Actinidia chinensis HOM05D002549 ORTHO05D002755 7.5e-12 73.9 97 48.5
RcHm_v2.0_Chr2g0136461 Rosa chinensis HOM05D002549 ORTHO05D002755 9.8e-12 73.6 120 44.2
Solyc03g116490.1 Solanum lycopersicum HOM05D002549 ORTHO05D002755 9.8e-12 73.6 121 42.1
arahy.Tifrunner.gnm1.ann1.CZ6M1X Arachis hypogaea HOM05D002549 ORTHO05D002755 1.3e-11 73.2 100 45.0
MSTRG.22728 Avicennia marina HOM05D002549 ORTHO05D002755 1.3e-11 73.2 118 44.9
MELO3C017897.2 Cucumis melo HOM05D002549 ORTHO05D002755 1.3e-11 73.2 121 43.8
Actinidia07432 Actinidia chinensis HOM05D002549 ORTHO05D002755 1.7e-11 72.8 97 48.5
Duzib235G0326 Durio zibethinus HOM05D002549 ORTHO05D002755 1.7e-11 72.8 130 38.5
Sopen03g035380 Solanum pennellii HOM05D002549 ORTHO05D002755 1.7e-11 72.8 121 42.1
CsaV3_4G001430 Cucumis sativus L. HOM05D002549 ORTHO05D002755 2.2e-11 72.4 123 43.1
Duzib168G1278 Durio zibethinus HOM05D002549 ORTHO05D002755 2.8e-11 72.0 105 41.9
CiPaw.01G245100 Carya illinoinensis HOM05D002549 ORTHO05D002755 3.7e-11 71.6 121 44.6
PGR031G0796 Punica granatum HOM05D002549 ORTHO05D002755 3.7e-11 71.6 86 48.8
Sed0026525 Sechium edule HOM05D002549 ORTHO05D002755 4.8e-11 71.2 100 46.0
Gohir.D07G038900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 8.3e-11 70.5 93 43.0
Hma1.2p1_0665F.1_g199110 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 8.3e-11 70.5 83 50.6
MD02G1035000 Malus domestica HOM05D002549 ORTHO05D002755 1.1e-10 70.1 107 40.2
Actinidia08809 Actinidia chinensis HOM05D002549 ORTHO05D002755 1.4e-10 69.7 106 42.5
Dinv41529 Davidia involucrata HOM05D002549 ORTHO05D002755 1.4e-10 69.7 83 51.8
Glyma.08G210800 Glycine max HOM05D002549 ORTHO05D002755 1.4e-10 69.7 104 43.3
Nn2g11971 Nelumbo nucifera HOM05D002549 ORTHO05D002755 1.4e-10 69.7 105 43.8
Sabra01G0139600 Salix brachista HOM05D002549 ORTHO05D002755 1.4e-10 69.7 119 40.3
PGSC0003DMG400000607 Solanum tuberosum HOM05D002549 ORTHO05D002755 1.4e-10 69.7 121 40.5
Gorai.001G041000 Gossypium raimondii HOM05D002549 ORTHO05D002755 1.8e-10 69.3 93 43.0
Lsat_1_v5_gn_5_132361 Lactuca sativa HOM05D002549 ORTHO05D002755 1.8e-10 69.3 115 40.0
Duzib187G0701 Durio zibethinus HOM05D002549 ORTHO05D002755 2.4e-10 68.9 105 41.9
Gohir.A05G017400 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.4e-10 68.9 108 39.8
Gorai.009G018700 Gossypium raimondii HOM05D002549 ORTHO05D002755 2.4e-10 68.9 108 39.8
Hma1.2p1_0018F.1_g012630 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 2.4e-10 68.9 87 47.1
MELO3C023405.2 Cucumis melo HOM05D002549 ORTHO05D002755 3.1e-10 68.6 109 41.3
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 3.1e-10 68.6 109 44.0
MSTRG.11120 Avicennia marina HOM05D002549 ORTHO05D002755 5.4e-10 67.8 119 42.9
Gohir.D05G018300 Gossypium hirsutum HOM05D002549 ORTHO05D002755 5.4e-10 67.8 108 39.8
Peaxi162Scf00641g00003 Petunia axillaris HOM05D002549 ORTHO05D002755 5.4e-10 67.8 94 45.7
Prupe.7G240000 Prunus persica HOM05D002549 ORTHO05D002755 5.4e-10 67.8 109 39.4
unitig_899.g14782 Utricularia gibba HOM05D002549 ORTHO05D002755 5.4e-10 67.8 123 39.0
Gohir.A07G034900 Gossypium hirsutum HOM05D002549 ORTHO05D002755 7.0e-10 67.4 92 41.3
Gorai.011G081600 Gossypium raimondii HOM05D002549 ORTHO05D002755 7.0e-10 67.4 127 37.0
Nitab4.5_0002257g0060 Nicotiana tabacum HOM05D002549 ORTHO05D002755 7.0e-10 67.4 124 37.9
Sc18g0000680 Simmondsia chinensis HOM05D002549 ORTHO05D002755 7.0e-10 67.4 89 49.4
PGSC0003DMG400036905 Solanum tuberosum HOM05D002549 ORTHO05D002755 7.0e-10 67.4 110 42.7
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.0e-10 67.4 111 45.0
Ah.14g080260 Amaranthus hybridus HOM05D002549 ORTHO05D002755 9.1e-10 67.0 90 47.8
COL.COLO4_05774 Corchorus olitorius HOM05D002549 ORTHO05D002755 9.1e-10 67.0 102 48.0
SGA_v2.0_scaffold5G02666 Striga asiatica HOM05D002549 ORTHO05D002755 9.1e-10 67.0 121 39.7
Thecc.06G070600 Theobroma cacao HOM05D002549 ORTHO05D002755 9.1e-10 67.0 137 35.8
CAN.G407.104 Capsicum annuum HOM05D002549 ORTHO05D002755 1.2e-09 66.6 122 41.8
PSO455G0279 Papaver somniferum HOM05D002549 ORTHO05D002755 1.2e-09 66.6 120 37.5
PGSC0003DMG400020666 Solanum tuberosum HOM05D002549 ORTHO05D002755 1.2e-09 66.6 83 48.2
Gohir.D10G075600 Gossypium hirsutum HOM05D002549 ORTHO05D002755 1.6e-09 66.2 128 35.9
Nn8g39394 Nelumbo nucifera HOM05D002549 ORTHO05D002755 1.6e-09 66.2 112 44.6
ClCG09G002760 Citrullus lanatus HOM05D002549 ORTHO05D002755 2.0e-09 65.9 110 44.5
Dinv30577 Davidia involucrata HOM05D002549 ORTHO05D002755 2.0e-09 65.9 108 47.2
Glyma.13G364000 Glycine max HOM05D002549 ORTHO05D002755 2.0e-09 65.9 105 43.8
CSS0010325 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.7e-09 65.5 116 38.8
CSS0036416 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.7e-09 65.5 116 38.8
Medtr4g011060 Medicago truncatula HOM05D002549 ORTHO05D002755 2.7e-09 65.5 108 41.7
Peaxi162Scf00274g00827 Petunia axillaris HOM05D002549 ORTHO05D002755 2.7e-09 65.5 121 38.0
Potri.003G062200 Populus trichocarpa HOM05D002549 ORTHO05D002755 2.7e-09 65.5 125 35.2
CAN.G377.7 Capsicum annuum HOM05D002549 ORTHO05D002755 3.5e-09 65.1 92 43.5
CsaV3_7G032570 Cucumis sativus L. HOM05D002549 ORTHO05D002755 3.5e-09 65.1 115 40.0
Dinv38101 Davidia involucrata HOM05D002549 ORTHO05D002755 3.5e-09 65.1 129 36.4
Eucgr.C01136 Eucalyptus grandis HOM05D002549 ORTHO05D002755 3.5e-09 65.1 99 44.4
Gohir.A10G075800 Gossypium hirsutum HOM05D002549 ORTHO05D002755 3.5e-09 65.1 128 35.9
Manes.04G115900 Manihot esculenta HOM05D002549 ORTHO05D002755 3.5e-09 65.1 121 39.7
Manes.11G053601 Manihot esculenta HOM05D002549 ORTHO05D002755 3.5e-09 65.1 118 36.4
PSO170G1992 Papaver somniferum HOM05D002549 ORTHO05D002755 3.5e-09 65.1 118 38.1
CiPaw.02G155200 Carya illinoinensis HOM05D002549 ORTHO05D002755 4.5e-09 64.7 122 40.2
CSS0001526 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 5.9e-09 64.3 93 45.2
CSS0031007 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 5.9e-09 64.3 93 45.2
Haze_25611 Corylus avellana HOM05D002549 ORTHO05D002755 5.9e-09 64.3 102 45.1
Phvul.010G154100 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 5.9e-09 64.3 101 41.6
Duzib160G0907 Durio zibethinus HOM05D002549 ORTHO05D002755 7.7e-09 63.9 130 36.9
Sed0017462 Sechium edule HOM05D002549 ORTHO05D002755 7.7e-09 63.9 111 42.3
unitig_0.g363 Utricularia gibba HOM05D002549 ORTHO05D002755 7.7e-09 63.9 128 38.3
VMungo1080G1223 Vigna mungo HOM05D002549 ORTHO05D002755 7.7e-09 63.9 116 40.5
AUR62011092 Chenopodium quinoa HOM05D002549 ORTHO05D002755 1.0e-08 63.5 111 38.7
Medtr4g114050 Medicago truncatula HOM05D002549 ORTHO05D002755 1.0e-08 63.5 104 43.3
Phvul.005G175700 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 1.0e-08 63.5 112 40.2
Solyc06g068020.1 Solanum lycopersicum HOM05D002549 ORTHO05D002755 1.0e-08 63.5 109 40.4
EL10Ac8g18620 Beta vulgaris HOM05D002549 ORTHO05D002755 1.3e-08 63.2 91 40.7
SalBow2G0396 Salvia bowleyana HOM05D002549 ORTHO05D002755 1.3e-08 63.2 129 37.2
Ca_01073_v3 Cicer arietinum L. HOM05D002549 ORTHO05D002755 1.7e-08 62.8 119 38.7
Glyma.13G168400 Glycine max HOM05D002549 ORTHO05D002755 1.7e-08 62.8 84 45.2
Oeu063796.1 Olea europaea HOM05D002549 ORTHO05D002755 1.7e-08 62.8 118 39.0
Psat5g301360 Pisum sativum HOM05D002549 ORTHO05D002755 1.7e-08 62.8 125 39.2
Potri.001G172100 Populus trichocarpa HOM05D002549 ORTHO05D002755 1.7e-08 62.8 119 36.1
Rhsim12G0192900 Rhododendron simsii HOM05D002549 ORTHO05D002755 1.7e-08 62.8 127 36.2
Sopen12g002570 Solanum pennellii HOM05D002549 ORTHO05D002755 1.7e-08 62.8 82 46.3
CSS0006659 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 2.2e-08 62.4 77 46.8
Glyma.17G116100 Glycine max HOM05D002549 ORTHO05D002755 2.2e-08 62.4 105 39.0
Lalb_Chr25g0279471 Lupinus albus HOM05D002549 ORTHO05D002755 2.2e-08 62.4 114 40.4
Cfa003350 Carpinus fangiana HOM05D002549 ORTHO05D002755 2.9e-08 62.0 104 41.3
Haze_16521 Corylus avellana HOM05D002549 ORTHO05D002755 2.9e-08 62.0 110 38.2
Eucgr.J03053 Eucalyptus grandis HOM05D002549 ORTHO05D002755 2.9e-08 62.0 127 35.4
Medtr2g103380 Medicago truncatula HOM05D002549 ORTHO05D002755 2.9e-08 62.0 123 36.6
Oeu015240.1 Olea europaea HOM05D002549 ORTHO05D002755 2.9e-08 62.0 110 40.0
Sed0002433 Sechium edule HOM05D002549 ORTHO05D002755 2.9e-08 62.0 114 40.4
Oeu033467.1 Olea europaea HOM05D002549 ORTHO05D002755 3.8e-08 61.6 107 43.0
TPR.G38685 Trifolium pratense HOM05D002549 ORTHO05D002755 3.8e-08 61.6 99 43.4
Glyma.15G009900 Glycine max HOM05D002549 ORTHO05D002755 5.0e-08 61.2 116 37.9
TPR.G8449 Trifolium pratense HOM05D002549 ORTHO05D002755 5.0e-08 61.2 117 36.8
TAR626G1731 Trochodendron aralioides HOM05D002549 ORTHO05D002755 5.0e-08 61.2 113 42.5
Cc06_g08750 Coffea canephora HOM05D002549 ORTHO05D002755 6.5e-08 60.8 101 44.6
MBI01_g37816_MAGBIO Magnolia biondii HOM05D002549 ORTHO05D002755 6.5e-08 60.8 102 42.2
Sc10g0005750 Simmondsia chinensis HOM05D002549 ORTHO05D002755 6.5e-08 60.8 108 43.5
Sc10g0007150 Simmondsia chinensis HOM05D002549 ORTHO05D002755 6.5e-08 60.8 121 38.8
CSS0019510 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 8.5e-08 60.5 97 44.3
CSS0040923 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 8.5e-08 60.5 97 44.3
Cc04_g04130 Coffea canephora HOM05D002549 ORTHO05D002755 1.1e-07 60.1 37 78.4
Gohir.A05G125500 Gossypium hirsutum HOM05D002549 ORTHO05D002755 1.1e-07 60.1 128 36.7
Peaxi162Scf00984g00014 Petunia axillaris HOM05D002549 ORTHO05D002755 1.1e-07 60.1 88 44.3
Manes.14G130728 Manihot esculenta HOM05D002549 ORTHO05D002755 1.5e-07 59.7 82 53.7
Thecc.09G123500 Theobroma cacao HOM05D002549 ORTHO05D002755 1.5e-07 59.7 106 38.7
TWI75G0818 Tripterygium wilfordii HOM05D002549 ORTHO05D002755 1.5e-07 59.7 118 39.8
Lalb_Chr13g0301951 Lupinus albus HOM05D002549 ORTHO05D002755 1.9e-07 59.3 105 41.0
TPR.G10706 Trifolium pratense HOM05D002549 ORTHO05D002755 1.9e-07 59.3 104 41.3
TAR625G1243 Trochodendron aralioides HOM05D002549 ORTHO05D002755 1.9e-07 59.3 113 40.7
VMungo1215G2005 Vigna mungo HOM05D002549 ORTHO05D002755 1.9e-07 59.3 106 39.6
ClCG06G010950 Citrullus lanatus HOM05D002549 ORTHO05D002755 2.5e-07 58.9 115 38.3
Gohir.D05G126500 Gossypium hirsutum HOM05D002549 ORTHO05D002755 2.5e-07 58.9 128 36.7
Gorai.009G130500 Gossypium raimondii HOM05D002549 ORTHO05D002755 2.5e-07 58.9 128 33.6
BolC2t09762H Brassica oleracea HOM05D002549 ORTHO05D002755 3.2e-07 58.5 125 32.8
CiPaw.03G242300 Carya illinoinensis HOM05D002549 ORTHO05D002755 3.2e-07 58.5 105 40.0
Oeu052277.1 Olea europaea HOM05D002549 ORTHO05D002755 3.2e-07 58.5 121 36.4
QL05p027977 Quercus lobata HOM05D002549 ORTHO05D002755 3.2e-07 58.5 125 40.0
BcaC03g15995 Brassica carinata HOM05D002549 ORTHO05D002755 4.2e-07 58.2 125 32.8
C02p37500 Brassica napus HOM05D002549 ORTHO05D002755 4.2e-07 58.2 125 32.8
FAN09G1314 Fragaria x ananassa HOM05D002549 ORTHO05D002755 4.2e-07 58.2 110 40.9
Hma1.2p1_0515F.1_g170200 Hydrangea macrophylla HOM05D002549 ORTHO05D002755 4.2e-07 58.2 111 38.7
Os05g0542732 Oryza sativa ssp. japonica HOM05D002549 ORTHO05D002755 4.2e-07 58.2 95 44.2
arahy.Tifrunner.gnm1.ann1.5SAJ1T Arachis hypogaea HOM05D002549 ORTHO05D002755 5.5e-07 57.8 132 37.9
arahy.Tifrunner.gnm1.ann1.D7QLLZ Arachis hypogaea HOM05D002549 ORTHO05D002755 5.5e-07 57.8 132 37.9
C05p13560 Brassica napus HOM05D002549 ORTHO05D002755 5.5e-07 57.8 120 36.7
DCAR_017826 Daucus carota HOM05D002549 ORTHO05D002755 7.2e-07 57.4 103 41.7
Lj3g0000921 Lotus japonicus HOM05D002549 ORTHO05D002755 7.2e-07 57.4 93 40.9
Actinidia15996 Actinidia chinensis HOM05D002549 ORTHO05D002755 9.4e-07 57.0 98 39.8
BcaC05g25481 Brassica carinata HOM05D002549 ORTHO05D002755 9.4e-07 57.0 134 35.8
AUR62033481 Chenopodium quinoa HOM05D002549 ORTHO05D002755 9.4e-07 57.0 94 40.4
TWI18G0054 Tripterygium wilfordii HOM05D002549 ORTHO05D002755 9.4e-07 57.0 120 36.7
VMungo0331G1840 Vigna mungo HOM05D002549 ORTHO05D002755 9.4e-07 57.0 113 38.1
ATR1156G028 Amborella trichopoda HOM05D002549 ORTHO05D002755 1.2e-06 56.6 108 38.0
CANSAT56G3753 Cannabis sativa HOM05D002549 ORTHO05D002755 1.2e-06 56.6 113 38.9
Carub.0002s2734 Capsella rubella HOM05D002549 ORTHO05D002755 1.2e-06 56.6 125 32.8
Duzib150G0928 Durio zibethinus HOM05D002549 ORTHO05D002755 1.2e-06 56.6 100 39.0
Psat4g040920 Pisum sativum HOM05D002549 ORTHO05D002755 1.2e-06 56.6 92 38.0
Aa31LG7G160 Aethionema arabicum HOM05D002549 ORTHO05D002755 1.6e-06 56.2 132 35.6
AT5G20100 Arabidopsis thaliana HOM05D002549 ORTHO05D002755 1.6e-06 56.2 110 41.8
BraA02t07367Z Brassica rapa HOM05D002549 ORTHO05D002755 1.6e-06 56.2 125 32.0
Prupe.3G081500 Prunus persica HOM05D002549 ORTHO05D002755 1.6e-06 56.2 113 38.9
EL10Ac9g21934 Beta vulgaris HOM05D002549 ORTHO05D002755 2.1e-06 55.8 111 35.1
Phvul.003G163200 Phaseolus vulgaris HOM05D002549 ORTHO05D002755 2.1e-06 55.8 102 36.3
Sed0003846 Sechium edule HOM05D002549 ORTHO05D002755 2.1e-06 55.8 97 43.3
A02p23750 Brassica napus HOM05D002549 ORTHO05D002755 2.7e-06 55.5 125 32.0
MELO3C026647.2 Cucumis melo HOM05D002549 ORTHO05D002755 2.7e-06 55.5 118 39.0
Psat7g255840 Pisum sativum HOM05D002549 ORTHO05D002755 2.7e-06 55.5 119 37.0
Aqoxy7G02107 Aquilegia oxysepala HOM05D002549 ORTHO05D002755 3.6e-06 55.1 94 43.6
Ciclev10009953m.g Citrus clementina HOM05D002549 ORTHO05D002755 3.6e-06 55.1 100 38.0
Nitab4.5_0004056g0010 Nicotiana tabacum HOM05D002549 ORTHO05D002755 3.6e-06 55.1 90 38.9
Zm00001eb155470 Zea mays HOM05D002549 ORTHO05D002755 3.6e-06 55.1 95 42.1
BolC5t30093H Brassica oleracea HOM05D002549 ORTHO05D002755 4.7e-06 54.7 133 34.6
CSS0043623 Camellia sinensis var. sinensis HOM05D002549 ORTHO05D002755 4.7e-06 54.7 122 36.1
AUR62011553 Chenopodium quinoa HOM05D002549 ORTHO05D002755 4.7e-06 54.7 116 37.1
Lsat_1_v5_gn_5_97080 Lactuca sativa HOM05D002549 ORTHO05D002755 4.7e-06 54.7 97 39.2
CARHR015940 Cardamine hirsuta HOM05D002549 ORTHO05D002755 6.1e-06 54.3 130 33.8
CARHR192730 Cardamine hirsuta HOM05D002549 ORTHO05D002755 6.1e-06 54.3 93 41.9
FvH4_6g30220 Fragaria vesca HOM05D002549 ORTHO05D002755 6.1e-06 54.3 111 39.6
FAN14G4053 Fragaria x ananassa HOM05D002549 ORTHO05D002755 6.1e-06 54.3 111 39.6
AL2G41330 Arabidopsis lyrata HOM05D002549 ORTHO05D002755 8.0e-06 53.9 132 31.8
BcaB05g25290 Brassica carinata HOM05D002549 ORTHO05D002755 8.0e-06 53.9 115 32.2
A06p11440 Brassica napus HOM05D002549 ORTHO05D002755 8.0e-06 53.9 120 35.0
BraA06t24322Z Brassica rapa HOM05D002549 ORTHO05D002755 8.0e-06 53.9 120 35.0
Lalb_Chr07g0178831 Lupinus albus HOM05D002549 ORTHO05D002755 8.0e-06 53.9 116 37.9
Sp1g13750 Schrenkiella parvula HOM05D002549 ORTHO05D002755 8.0e-06 53.9 123 33.3
Sp5g35620 Schrenkiella parvula HOM05D002549 ORTHO05D002755 8.0e-06 53.9 123 34.1
THA.LOC104812501 Tarenaya hassleriana HOM05D002549 ORTHO05D002755 8.0e-06 53.9 50 56.0


User provided reference genes

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