Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1046 Utricularia gibba HOM05D002412 ORTHO05D002516 9.5e-95 350.1 173 100.0
unitig_744.g24125 Utricularia gibba HOM05D002412 ORTHO05D002516 1.1e-18 97.4 163 41.7
unitig_21.g20629 Utricularia gibba HOM05D002412 ORTHO05D002516 4.2e-18 95.5 162 40.7
unitig_578.g16152 Utricularia gibba HOM05D002412 ORTHO05D002516 1.0e-16 90.9 119 49.6
unitig_8.g4872 Utricularia gibba HOM05D002412 ORTHO05D002516 5.7e-15 85.1 160 40.6
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 3.5e-12 75.9 146 41.1
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 1.3e-11 73.9 124 40.3
unitig_21.g20307 Utricularia gibba HOM05D002412 ORTHO05D002516 2.2e-11 73.2 147 38.8
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.5e-10 69.7 169 35.5
DCAR_012823 Daucus carota HOM05D002412 ORTHO05D002516 7.2e-10 68.2 124 43.5
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 9.4e-10 67.8 142 38.0
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 1.6e-09 67.0 129 38.0
vmacro01953 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 1.6e-09 67.0 122 42.6
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 1.0e-08 64.3 124 41.1
MSTRG.1024 Avicennia marina HOM05D002412 ORTHO05D002516 2.3e-08 63.2 133 39.1
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 3.0e-08 62.8 128 37.5
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 3.0e-08 62.8 116 39.7
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 4.0e-08 62.4 130 37.7
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 5.2e-08 62.0 115 40.9
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 6.8e-08 61.6 119 39.5
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 6.8e-08 61.6 119 39.5
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 8.8e-08 61.2 157 35.7
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 8.8e-08 61.2 129 35.7
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 8.8e-08 61.2 133 36.8
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 1.2e-07 60.8 179 33.0
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.2e-07 60.8 171 32.7
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 1.2e-07 60.8 173 34.7
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.2e-07 60.8 160 34.4
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 1.5e-07 60.5 120 35.8
DCAR_020053 Daucus carota HOM05D002412 ORTHO05D002516 2.0e-07 60.1 144 35.4
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 2.0e-07 60.1 111 40.5
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.0e-07 60.1 131 37.4
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 2.0e-07 60.1 116 37.9
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 2.6e-07 59.7 135 37.8
A03p62330 Brassica napus HOM05D002412 ORTHO05D002516 2.6e-07 59.7 134 38.1
C07p59890 Brassica napus HOM05D002412 ORTHO05D002516 2.6e-07 59.7 135 38.5
BolC7t46433H Brassica oleracea HOM05D002412 ORTHO05D002516 2.6e-07 59.7 135 37.8
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 2.6e-07 59.7 134 38.1
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 2.6e-07 59.7 128 39.1
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 3.4e-07 59.3 137 38.0
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.4e-07 59.3 127 37.8
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 3.4e-07 59.3 121 38.0
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 4.4e-07 58.9 123 35.0
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.4e-07 58.9 129 37.2
Migut.C00481 Erythranthe guttata HOM05D062627 ORTHO05D002516 4.4e-07 58.9 124 39.5
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 4.4e-07 58.9 133 37.6
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 4.4e-07 58.9 121 36.4
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 4.4e-07 58.9 185 33.5
Peaxi162Scf00160g00517 Petunia axillaris HOM05D002412 ORTHO05D002516 7.5e-07 58.2 109 38.5
Oeu053627.1 Olea europaea HOM05D002412 ORTHO05D002516 9.8e-07 57.8 125 38.4
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 9.8e-07 57.8 138 39.1
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.3e-06 57.4 123 38.2
AT4G33800 Arabidopsis thaliana HOM05D002412 ORTHO05D002516 1.3e-06 57.4 165 35.8
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 1.3e-06 57.4 120 35.8
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.7e-06 57.0 159 35.2
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 1.7e-06 57.0 127 37.8
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.7e-06 57.0 118 38.1
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 1.7e-06 57.0 133 36.8
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.7e-06 57.0 173 33.5
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.2e-06 56.6 122 39.3
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 2.2e-06 56.6 139 32.4
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 2.2e-06 56.6 137 37.2
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.8e-06 56.2 129 35.7
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.8e-06 56.2 119 41.2
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.8e-06 56.2 129 34.9
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 3.7e-06 55.8 108 38.0
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 3.7e-06 55.8 129 38.0
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 3.7e-06 55.8 132 39.4
ClCG08G016590 Citrullus lanatus HOM05D002412 ORTHO05D002516 4.9e-06 55.5 127 36.2
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 4.9e-06 55.5 130 37.7
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 4.9e-06 55.5 113 40.7
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.9e-06 55.5 113 40.7
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 6.3e-06 55.1 137 38.7
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 6.3e-06 55.1 113 40.7
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 6.3e-06 55.1 140 34.3
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 8.3e-06 54.7 141 34.8
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 8.3e-06 54.7 130 33.1
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 8.3e-06 54.7 129 41.1
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 8.3e-06 54.7 118 38.1
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 8.3e-06 54.7 130 33.8


User provided reference genes

Program Settings