Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 2.7e-216 755.4 474 100.0
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 2.7e-99 366.7 488 58.4
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 3.8e-93 346.3 452 60.6
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 1.1e-92 344.7 492 58.3
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 2.3e-90 337.0 526 54.2
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 4.2e-84 316.2 437 59.5
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 3.5e-83 313.2 579 50.3
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 3.5e-83 313.2 463 59.2
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 4.6e-83 312.8 463 59.0
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 1.3e-82 311.2 523 52.6
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 5.1e-82 309.3 477 58.5
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 3.3e-81 306.6 513 57.5
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 4.3e-81 306.2 502 56.4
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.3e-80 304.7 422 61.1
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 2.1e-80 303.9 446 54.0
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 2.4e-79 300.4 458 58.3
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 1.3e-77 294.7 498 53.8
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 2.9e-77 293.5 505 50.5
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 8.4e-77 292.0 455 56.3
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 8.4e-77 292.0 490 54.1
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 9.3e-76 288.5 526 54.8
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 1.2e-75 288.1 424 53.5
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 1.2e-75 288.1 538 47.0
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.6e-75 287.7 414 60.9
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 3.5e-75 286.6 490 56.7
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 1.3e-74 284.6 535 48.4
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 1.3e-74 284.6 497 55.3
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 5.1e-74 282.7 547 51.2
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 8.7e-74 282.0 494 55.7
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 1.1e-73 281.6 418 53.6
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 1.5e-73 281.2 449 53.0
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 1.5e-73 281.2 442 55.2
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 5.7e-73 279.3 484 52.5
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 7.4e-73 278.9 511 53.6
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 1.6e-72 277.7 512 50.2
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 2.8e-72 276.9 499 53.1
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.7e-72 276.6 502 55.6
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 8.2e-72 275.4 502 53.8
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 8.2e-72 275.4 539 50.8
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 8.2e-72 275.4 516 53.9
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 1.4e-71 274.6 393 62.3
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 1.4e-71 274.6 507 53.1
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 1.4e-71 274.6 433 59.6
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 1.4e-71 274.6 512 53.9
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 1.8e-71 274.2 438 55.7
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 2.4e-71 273.9 551 50.6
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 2.4e-71 273.9 177 79.7
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 3.1e-71 273.5 401 62.1
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.1e-71 273.5 552 47.8
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 5.3e-71 272.7 419 59.2
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 6.9e-71 272.3 506 54.9
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 1.5e-70 271.2 442 56.3
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 1.5e-70 271.2 414 60.6
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 2.0e-70 270.8 447 53.5
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 2.6e-70 270.4 162 82.1
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 3.4e-70 270.0 497 55.7
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.0e-69 268.5 532 49.6
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.0e-69 268.5 419 58.2
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 1.3e-69 268.1 402 61.2
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 2.2e-69 267.3 466 55.4
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 2.2e-69 267.3 512 51.2
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 3.8e-69 266.5 414 54.3
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 5.0e-69 266.2 163 82.8
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 5.0e-69 266.2 446 57.8
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 5.0e-69 266.2 396 62.4
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 6.5e-69 265.8 553 46.8
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 8.5e-69 265.4 466 55.2
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 1.9e-68 264.2 395 61.5
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 2.5e-68 263.8 174 78.2
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 2.5e-68 263.8 417 60.0
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 3.2e-68 263.5 407 60.0
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 7.2e-68 262.3 514 52.5
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 9.4e-68 261.9 470 52.3
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 1.2e-67 261.5 435 58.6
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.6e-67 261.2 160 81.9
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 2.1e-67 260.8 419 58.9
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 2.7e-67 260.4 402 60.7
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 2.7e-67 260.4 407 61.2
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 3.6e-67 260.0 163 81.0
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 4.6e-67 259.6 510 51.2
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 4.6e-67 259.6 181 73.5
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 4.6e-67 259.6 404 59.9
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 1.0e-66 258.5 439 56.5
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 3.0e-66 256.9 158 81.6
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 5.1e-66 256.1 497 50.7
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 8.8e-66 255.4 411 58.9
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 8.8e-66 255.4 179 74.3
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 1.5e-65 254.6 430 56.0
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 2.5e-65 253.8 419 58.0
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 3.3e-65 253.4 394 60.4
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 4.3e-65 253.1 557 46.9
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 5.7e-65 252.7 521 48.4
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 7.4e-65 252.3 413 59.3
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 7.4e-65 252.3 160 80.0
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 9.7e-65 251.9 555 49.0
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 9.7e-65 251.9 410 58.8
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 1.7e-64 251.1 171 75.4
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-64 251.1 178 73.0
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 1.7e-64 251.1 540 49.4
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 2.2e-64 250.8 161 79.5
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 2.2e-64 250.8 572 41.4
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 3.7e-64 250.0 165 77.0
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 4.8e-64 249.6 165 76.4
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 8.2e-64 248.8 391 60.1
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 8.2e-64 248.8 159 79.2
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 1.4e-63 248.1 507 44.0
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 4.1e-63 246.5 391 61.4
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 6.9e-63 245.7 169 75.1
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 9.1e-63 245.4 152 81.6
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 1.2e-62 245.0 392 56.9
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.2e-62 245.0 178 71.9
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 5.9e-62 242.7 535 49.7
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 1.0e-61 241.9 391 59.1
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 1.0e-61 241.9 468 43.6
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 1.3e-61 241.5 152 79.6
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 1.7e-61 241.1 168 76.8
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 2.2e-61 240.7 157 78.3
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 3.8e-61 240.0 391 59.6
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.5e-60 237.3 386 60.6
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 3.2e-60 236.9 135 86.7
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 3.2e-60 236.9 475 45.3
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 4.2e-60 236.5 402 58.0
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 4.7e-59 233.0 134 85.8
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 1.0e-58 231.9 391 58.6
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-58 231.5 391 59.3
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 5.1e-58 229.6 134 85.1
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 1.5e-57 228.0 130 86.2
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 2.0e-57 227.6 182 69.8
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 4.4e-57 226.5 473 51.2
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 5.7e-57 226.1 173 69.4
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 9.7e-57 225.3 178 69.7
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 1.3e-56 224.9 134 83.6
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 2.8e-56 223.8 391 41.4
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 2.8e-56 223.8 476 45.4
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 2.4e-55 220.7 176 68.8
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 1.2e-54 218.4 349 60.5
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 2.0e-54 217.6 391 55.2
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 3.4e-54 216.9 172 69.2
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 3.4e-54 216.9 172 69.2
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 3.8e-53 213.4 133 83.5
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 5.0e-53 213.0 183 63.4
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-52 211.1 391 44.2
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 8.8e-50 202.2 163 65.0
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 3.1e-47 193.7 163 63.8
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 4.2e-44 183.3 106 84.9
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.1e-43 181.0 409 44.5
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.8e-42 177.9 127 73.2
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 6.7e-42 176.0 133 71.4
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 1.2e-41 175.3 100 87.0
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 4.8e-40 169.9 133 69.2
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 9.1e-39 165.6 105 78.1
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 1.2e-38 165.2 106 78.3
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 8.0e-35 152.5 161 55.9
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 5.2e-34 149.8 105 70.5
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 8.3e-32 142.5 116 61.2
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 1.8e-31 141.4 86 81.4
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 4.1e-31 140.2 86 81.4
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 1.7e-29 134.8 112 56.2
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 6.1e-27 126.3 87 72.4
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 6.1e-27 126.3 70 90.0
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 1.4e-26 125.2 87 72.4
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 3.0e-26 124.0 66 95.5
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 5.2e-26 123.2 161 47.8
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 9.2e-23 112.5 70 81.4
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 5.9e-22 109.8 70 80.0
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 5.0e-21 106.7 482 39.2
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.9e-20 104.8 311 52.7
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 9.5e-20 102.4 69 76.8
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 1.2e-17 95.5 56 87.5
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.1e-15 89.0 56 82.1
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 1.6e-14 85.1 160 43.8
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 6.0e-14 83.2 56 76.8
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 7.5e-09 66.2 93 49.5
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 1.7e-08 65.1 92 52.2
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 2.2e-08 64.7 48 66.7
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 5.4e-07 60.1 73 56.2
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 2.1e-06 58.2 80 47.5


User provided reference genes

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