Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 7.1e-108 394.0 212 100.0
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 2.2e-101 372.5 233 88.8
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 1.8e-71 273.1 209 73.2
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.3e-69 266.9 209 71.8
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 6.5e-69 264.6 202 71.8
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.4e-68 263.5 202 72.3
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 2.5e-57 226.1 209 62.7
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.2e-51 207.2 160 69.4
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.6e-51 206.8 211 56.4
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 2.3e-50 203.0 211 55.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 2.0e-49 199.9 144 75.0
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 2.5e-49 199.5 144 74.3
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 4.3e-49 198.7 211 54.0
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.4e-47 193.0 211 54.0
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.6e-46 189.5 207 51.7
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 3.4e-46 189.1 207 55.6
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 5.9e-46 188.3 204 52.0
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 5.9e-46 188.3 209 52.2
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 5.9e-46 188.3 211 53.1
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 2.5e-44 183.0 201 51.2
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 3.2e-44 182.6 210 51.0
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 7.9e-43 177.9 210 50.5
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.4e-42 177.2 200 53.5
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.9e-42 175.6 226 48.7
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 5.1e-42 175.3 210 49.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 2.0e-41 173.3 205 50.7
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 2.0e-41 173.3 201 49.3
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 2.6e-41 172.9 119 79.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 4.8e-40 168.7 209 47.4
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.1e-39 167.5 201 51.7
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.1e-39 167.5 208 47.6
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.4e-39 167.2 209 46.4
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 2.4e-39 166.4 205 46.3
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.4e-39 166.4 209 46.4
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 4.1e-39 165.6 229 43.7
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 2.6e-38 162.9 208 46.6
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 3.5e-38 162.5 209 49.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 3.5e-38 162.5 209 45.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 5.9e-38 161.8 208 46.2
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 1.7e-37 160.2 199 48.2
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 2.9e-37 159.5 210 44.3
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.5e-36 157.1 197 46.7
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 9.4e-36 154.5 211 46.0
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 9.4e-36 154.5 211 46.0
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 9.4e-36 154.5 215 47.9
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.7e-35 152.1 210 44.8
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.0e-34 151.0 197 44.7
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 4.0e-34 149.1 211 46.0
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.6e-33 146.4 210 43.8
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.8e-31 140.2 155 49.0
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 2.4e-31 139.8 208 42.8
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.4e-31 139.8 219 45.2
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 7.0e-31 138.3 155 48.4
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 9.1e-31 137.9 218 43.6
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.0e-30 136.7 189 45.5
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 4.5e-30 135.6 208 41.8
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 1.0e-29 134.4 155 47.7
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.0e-29 134.4 121 65.3
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.0e-29 134.4 207 41.5
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.3e-29 134.0 155 48.4
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.7e-29 133.7 156 45.5
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 2.5e-28 129.8 155 46.5
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 3.2e-28 129.4 161 44.7
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 4.2e-28 129.0 198 42.4
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.1e-27 126.7 145 49.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.4e-26 124.0 155 43.9
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 4.0e-26 122.5 145 46.9
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 4.4e-25 119.0 162 43.2
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 7.5e-25 118.2 143 49.7
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.8e-23 113.6 198 39.9
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 7.0e-23 111.7 183 38.3
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 9.1e-23 111.3 201 39.8
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.2e-22 110.9 144 45.8
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.7e-22 109.8 201 39.3
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.5e-22 109.0 201 38.8
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 7.7e-22 108.2 108 55.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 6.5e-21 105.1 130 43.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 5.5e-20 102.1 129 42.6
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 3.6e-19 99.4 117 47.9
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.0e-18 97.8 107 48.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.0e-18 97.8 142 42.3
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.8e-18 95.1 166 39.2
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 1.5e-17 94.0 120 45.0
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.6e-17 93.2 142 41.5
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 2.8e-16 89.7 208 33.2
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 8.3e-16 88.2 102 47.1
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 2.7e-14 83.2 151 37.7
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.9e-14 82.0 130 41.5
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 1.9e-12 77.0 128 33.6
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 2.5e-12 76.6 125 35.2
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.3e-12 75.9 89 49.4
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 9.5e-12 74.7 114 40.4
arahy.Tifrunner.gnm1.ann1.S3RJ19 Arachis hypogaea HOM05D007451 ORTHO05D009399 4.7e-11 72.4 62 69.4
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.0e-10 69.7 95 42.1
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 8.9e-10 68.2 82 43.9
TPR.G40722 Trifolium pratense HOM05D007451 ORTHO05D009399 4.4e-09 65.9 55 67.3
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 7.5e-09 65.1 74 43.2
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 3.2e-07 59.7 92 38.0
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 5.4e-07 58.9 195 27.2
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 5.4e-07 58.9 65 47.7


User provided reference genes

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