Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 5.9e-115 417.5 209 100.0
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.6e-83 313.2 192 88.0
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 2.0e-70 269.6 176 75.6
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 5.8e-70 268.1 160 83.8
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 2.2e-69 266.2 160 82.5
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 6.4e-69 264.6 144 95.1
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 8.3e-69 264.2 162 79.0
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.1e-68 263.8 162 79.6
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 2.4e-68 262.7 162 79.6
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 3.2e-68 262.3 160 80.6
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 5.4e-68 261.5 162 80.2
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.2e-67 260.4 162 79.0
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 2.0e-67 259.6 162 79.6
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 2.7e-67 259.2 162 78.4
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 4.6e-67 258.5 162 77.8
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 6.0e-67 258.1 167 75.4
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 6.0e-67 258.1 162 77.2
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 1.7e-66 256.5 162 79.0
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 1.7e-66 256.5 162 78.4
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 2.3e-66 256.1 162 78.4
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 5.0e-66 255.0 162 76.5
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 6.6e-66 254.6 162 79.0
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.5e-65 253.4 162 78.4
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 1.5e-65 253.4 158 77.2
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 1.9e-65 253.1 162 76.5
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 1.9e-65 253.1 162 77.8
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 1.9e-65 253.1 176 72.2
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 2.5e-65 252.7 169 73.4
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 3.3e-65 252.3 167 74.9
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 3.3e-65 252.3 162 76.5
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 9.5e-65 250.8 162 75.9
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 9.5e-65 250.8 162 74.7
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.6e-64 250.0 162 77.8
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 1.6e-64 250.0 162 75.3
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 2.1e-64 249.6 162 74.7
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 2.1e-64 249.6 162 74.7
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 2.1e-64 249.6 162 75.9
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 3.6e-64 248.8 162 74.7
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 4.7e-64 248.4 163 76.1
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 1.1e-63 247.3 162 74.1
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 1.4e-63 246.9 162 74.7
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 2.3e-63 246.1 162 74.7
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 3.1e-63 245.7 168 72.6
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 3.1e-63 245.7 162 72.2
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 3.1e-63 245.7 162 72.2
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 3.1e-63 245.7 162 74.7
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 5.2e-63 245.0 162 74.7
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 6.8e-63 244.6 163 71.8
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 8.9e-63 244.2 159 76.1
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 1.2e-62 243.8 162 73.5
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 1.2e-62 243.8 162 73.5
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 2.0e-62 243.0 162 72.2
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 3.7e-61 238.8 132 94.7
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 4.9e-61 238.4 154 77.9
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 3.2e-60 235.7 183 65.6
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 7.0e-60 234.6 153 77.1
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 1.6e-59 233.4 162 71.6
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 2.1e-59 233.0 187 65.2
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 6.0e-59 231.5 163 69.3
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 7.8e-59 231.1 156 73.7
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 1.0e-58 230.7 156 73.7
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 1.3e-58 230.3 169 68.6
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 6.6e-58 228.0 138 79.0
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 2.8e-56 222.6 162 68.5
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 1.1e-55 220.7 227 54.2
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 5.2e-55 218.4 152 70.4
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 2.0e-54 216.5 164 68.3
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 2.7e-51 206.1 146 67.1
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 3.5e-51 205.7 128 81.2
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 2.3e-50 203.0 189 58.7
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 4.2e-44 182.2 162 56.2
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 6.0e-43 178.3 110 76.4
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 9.6e-41 171.0 110 71.8
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 9.0e-39 164.5 158 51.3
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 2.4e-36 156.4 95 77.9
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 4.2e-36 155.6 104 75.0
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 3.5e-35 152.5 158 52.5
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 6.0e-35 151.8 136 58.8
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.7e-29 133.7 65 98.5
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 8.7e-26 121.3 158 44.9
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 9.6e-25 117.9 165 36.4
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 2.1e-24 116.7 165 36.4
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 8.1e-24 114.8 69 82.6
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 2.4e-23 113.2 107 57.0
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 9.0e-23 111.3 70 80.0
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 5.8e-22 108.6 162 37.0
Actinidia18005 Actinidia chinensis HOM05D007618 ORTHO05D009606 1.3e-21 107.5 92 58.7
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 8.4e-21 104.8 162 37.0
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 5.5e-20 102.1 121 49.6
Atru.chr5.3316 Acer truncatum HOM05D000282 ORTHO05D000272 1.0e-18 97.8 61 73.8
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 3.9e-18 95.9 162 31.5
Atru.chr8.2195 Acer truncatum HOM05D000282 ORTHO05D009606 1.9e-17 93.6 64 67.2
Atru.chr9.1689 Acer truncatum HOM05D000282 ORTHO05D009606 4.0e-15 85.9 54 70.4
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 5.3e-15 85.5 165 33.9
Nn5g30826 Nelumbo nucifera HOM05D007618 ORTHO05D009606 5.3e-15 85.5 70 58.6
CDE05G1760 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 1.5e-14 84.0 60 61.7
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 5.0e-13 79.0 78 60.3
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 5.0e-13 79.0 56 69.6
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 7.9e-11 71.6 51 70.6
Atru.chr4.2937 Acer truncatum HOM05D000282 ORTHO05D000272 2.5e-09 66.6 47 63.8
Cc03_g12640 Coffea canephora HOM05D007618 ORTHO05D009606 5.7e-09 65.5 67 53.7
Pp3c20_4100 Physcomitrium patens HOM05D000059 ORTHO05D000128 4.1e-07 59.3 134 28.4
PGR004G2564 Punica granatum HOM05D000059 ORTHO05D000128 5.3e-07 58.9 134 29.9
EL10Ac1g02091 Beta vulgaris HOM05D000059 ORTHO05D000128 6.9e-07 58.5 132 24.2
Pp3c20_4170 Physcomitrium patens HOM05D000059 ORTHO05D000128 6.9e-07 58.5 134 28.4
MSTRG.19328 Avicennia marina HOM05D000059 ORTHO05D000128 1.5e-06 57.4 134 26.1
FAN02G3354 Fragaria x ananassa HOM05D000059 ORTHO05D000128 2.0e-06 57.0 132 28.0
BcaB04g19857 Brassica carinata HOM05D000059 ORTHO05D000128 3.4e-06 56.2 132 24.2
Mapoly0089s0009 Marchantia polymorpha HOM05D000059 ORTHO05D000128 3.4e-06 56.2 132 26.5
Lsat_1_v5_gn_5_149341 Lactuca sativa HOM05D000059 ORTHO05D000528 4.5e-06 55.8 166 27.1
CAN.G404.58 Capsicum annuum HOM05D000059 ORTHO05D000128 1.0e-05 54.7 132 25.8


User provided reference genes

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