Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 9.1e-162 573.5 297 100.0
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-157 559.3 297 98.0
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 8.9e-141 503.8 297 85.2
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 8.3e-139 497.3 297 84.2
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.4e-138 496.5 298 83.9
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 3.1e-138 495.4 297 83.5
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 2.7e-137 492.3 297 82.5
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 8.6e-136 487.3 297 83.8
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 4.7e-134 481.5 297 80.1
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 4.7e-134 481.5 297 80.5
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 1.8e-133 479.6 297 81.5
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 4.0e-133 478.4 297 79.8
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.2e-132 476.9 297 81.8
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 2.0e-132 476.1 297 80.8
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.0e-132 476.1 297 80.5
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 3.4e-132 475.3 297 80.8
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 4.4e-132 474.9 297 80.5
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 4.4e-132 474.9 297 79.1
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 2.2e-131 472.6 292 79.1
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.4e-130 469.9 297 79.5
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 1.4e-130 469.9 305 79.3
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.9e-130 469.5 297 81.1
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.9e-130 469.5 297 78.5
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 7.0e-130 467.6 305 79.0
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 9.2e-130 467.2 294 80.3
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.6e-129 466.5 295 79.0
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.6e-129 466.5 297 80.1
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 3.5e-129 465.3 295 80.0
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.3e-128 463.4 297 80.8
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.3e-128 463.4 297 80.1
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 1.3e-128 463.4 297 79.5
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 1.7e-128 463.0 302 79.1
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 1.7e-128 463.0 297 80.1
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 2.3e-128 462.6 297 77.4
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 3.9e-128 461.8 297 79.1
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.9e-128 461.8 298 79.2
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 6.6e-128 461.1 297 79.1
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.6e-128 461.1 297 79.1
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.1e-127 460.3 299 77.3
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.5e-127 459.1 298 77.5
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.5e-127 459.1 298 77.5
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.3e-127 458.8 297 75.8
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.3e-127 458.8 294 78.6
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.3e-127 458.8 294 78.6
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 3.3e-127 458.8 294 77.6
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 4.3e-127 458.4 297 75.1
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 4.3e-127 458.4 294 77.2
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 5.6e-127 458.0 297 76.4
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 7.3e-127 457.6 298 78.5
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 78.5
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.2e-126 456.8 298 77.5
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 2.8e-126 455.7 297 79.1
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.6e-126 455.3 297 75.4
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 4.7e-126 454.9 297 75.8
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 4.7e-126 454.9 297 76.4
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 6.2e-126 454.5 297 77.4
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 6.2e-126 454.5 297 76.4
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 6.2e-126 454.5 294 76.9
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.1e-125 453.8 298 77.9
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 1.1e-125 453.8 297 78.1
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 3.1e-125 452.2 294 76.5
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 5.2e-125 451.4 298 77.2
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 4.4e-124 448.4 295 75.9
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 9.8e-124 447.2 315 72.4
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 9.8e-124 447.2 282 79.4
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 1.3e-123 446.8 341 68.0
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 1.3e-123 446.8 297 76.1
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.7e-123 445.3 315 72.4
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 8.3e-123 444.1 297 76.1
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.4e-122 443.4 297 75.4
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.4e-122 443.4 298 77.5
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 75.4
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 5.4e-122 441.4 293 75.4
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 76.1
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.2e-121 440.3 297 74.7
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 1.2e-121 440.3 297 74.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.1e-121 439.5 297 74.7
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 2.7e-121 439.1 296 73.0
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 3.5e-121 438.7 295 75.3
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.3e-120 436.8 315 70.8
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.3e-120 436.8 294 75.2
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.7e-120 436.4 297 74.1
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.7e-120 436.4 294 75.2
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 2.3e-120 436.0 295 74.6
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 3.9e-120 435.3 294 73.1
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 1.1e-119 433.7 281 76.9
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 1.1e-119 433.7 295 73.9
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.5e-119 433.3 298 72.8
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 1.9e-119 433.0 298 73.2
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.9e-119 433.0 292 74.7
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 3.3e-119 432.2 295 73.6
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 5.6e-119 431.4 296 72.6
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 9.5e-119 430.6 295 72.9
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 9.5e-119 430.6 295 73.2
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 1.2e-118 430.3 295 73.2
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.6e-118 428.7 282 75.9
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 3.1e-117 425.6 295 72.5
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 3.1e-117 425.6 295 72.5
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 3.1e-117 425.6 276 79.0
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 3.4e-116 422.2 295 71.9
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 5.8e-116 421.4 284 73.9
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 7.5e-116 421.0 297 71.0
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 1.3e-115 420.2 269 78.1
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 4.9e-115 418.3 295 71.5
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.1e-114 417.2 250 81.2
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.2e-113 413.7 297 71.4
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 4.6e-113 411.8 295 71.5
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.9e-107 392.5 320 65.3
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.5e-103 379.4 297 67.0
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 1.4e-101 373.6 297 67.3
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 2.4e-101 372.9 297 67.3
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 5.4e-98 361.7 272 70.6
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 8.1e-94 347.8 219 79.5
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.6e-92 342.8 294 58.5
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.4e-92 342.4 223 76.7
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 4.5e-92 342.0 216 78.7
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.7e-91 340.1 291 56.7
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.1e-90 337.4 294 57.1
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 1.1e-90 337.4 223 77.1
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.1e-87 327.4 294 55.4
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 1.6e-86 323.6 295 56.9
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 2.8e-86 322.8 262 59.5
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 1.8e-85 320.1 223 73.5
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 4.0e-85 318.9 290 57.6
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 2.9e-83 312.8 220 71.8
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.4e-82 310.5 281 59.8
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 8.2e-78 294.7 237 67.1
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 4.2e-74 282.3 256 55.1
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 1.6e-70 270.4 223 65.5
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 2.6e-68 263.1 177 75.1
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 8.2e-62 241.5 203 63.5
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 1.2e-60 237.7 150 80.7
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 2.2e-59 233.4 165 67.9
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 8.5e-59 231.5 149 77.2
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 2.8e-54 216.5 143 71.3
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.5e-50 203.4 135 72.6
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 2.2e-46 190.3 135 74.1
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.1e-42 177.9 266 36.5
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.2e-41 174.5 106 84.0
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 4.0e-40 169.5 182 53.3
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 4.5e-36 156.0 131 66.4
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.6e-33 147.5 309 34.0
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 4.7e-33 146.0 118 63.6
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 1.8e-32 144.1 99 67.7
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 6.6e-27 125.6 116 62.1
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 1.1e-26 124.8 270 30.7
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.3e-22 111.3 81 66.7
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 2.8e-22 110.2 128 50.8
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 1.8e-21 107.5 65 83.1
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 3.9e-19 99.8 97 59.8
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 9.5e-18 95.1 97 57.7
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 2.3e-11 73.9 91 48.4
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 3.3e-10 70.1 44 79.5
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.2e-08 62.8 54 59.3
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.5e-07 61.2 59 54.2
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 2.6e-07 60.5 39 69.2
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.8e-07 59.3 54 55.6
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.8e-07 59.3 54 55.6
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 9.8e-07 58.5 32 84.4


User provided reference genes

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