Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZRA2QP Arachis hypogaea HOM05D003468 ORTHO05D002806 2.7e-107 392.1 210 100.0
arahy.Tifrunner.gnm1.ann1.UJZR4Z Arachis hypogaea HOM05D003468 ORTHO05D002806 1.0e-50 204.1 195 57.9
arahy.Tifrunner.gnm1.ann1.NCBN9K Arachis hypogaea HOM05D003468 ORTHO05D002806 1.5e-49 200.3 195 61.5
arahy.Tifrunner.gnm1.ann1.64FYBZ Arachis hypogaea HOM05D000945 ORTHO05D000919 7.6e-46 188.0 117 87.2
arahy.Tifrunner.gnm1.ann1.C9TTE9 Arachis hypogaea HOM05D003468 ORTHO05D002806 3.7e-40 169.1 271 46.1
arahy.Tifrunner.gnm1.ann1.ZR769L Arachis hypogaea HOM05D003468 ORTHO05D002806 3.7e-40 169.1 271 46.1
arahy.Tifrunner.gnm1.ann1.596HBI Arachis hypogaea HOM05D003468 ORTHO05D002806 3.4e-38 162.5 190 55.8
arahy.Tifrunner.gnm1.ann1.DRQC3V Arachis hypogaea HOM05D003468 ORTHO05D002806 2.4e-31 139.8 194 44.3
VMungo0540G0681 Vigna mungo HOM05D003468 ORTHO05D002806 5.0e-29 132.1 194 42.3
Ca_15053_v3 Cicer arietinum L. HOM05D003468 ORTHO05D002806 7.1e-28 128.3 214 41.1
Psat5g148920 Pisum sativum HOM05D003468 ORTHO05D002806 2.1e-27 126.7 216 42.1
TPR.G28801 Trifolium pratense HOM05D003468 ORTHO05D002806 7.9e-27 124.8 199 42.7
Glyma.18G052700 Glycine max HOM05D003468 ORTHO05D002806 5.1e-26 122.1 198 43.4
Phvul.006G078200 Phaseolus vulgaris HOM05D003468 ORTHO05D002806 2.5e-25 119.8 199 39.2
Glyma.11G186600 Glycine max HOM05D003468 ORTHO05D002806 1.6e-24 117.1 198 42.4
Lj6g0018146 Lotus japonicus HOM05D003468 ORTHO05D002806 1.6e-24 117.1 195 40.5
TPR.G10431 Trifolium pratense HOM05D003468 ORTHO05D002806 2.4e-23 113.2 201 39.3
Lalb_Chr18g0054251 Lupinus albus HOM05D003468 ORTHO05D002806 6.9e-23 111.7 195 41.5
arahy.Tifrunner.gnm1.ann1.VH5N8W Arachis hypogaea HOM05D003468 ORTHO05D002806 1.5e-22 110.5 125 60.8
Medtr3g467090 Medicago truncatula HOM05D003468 ORTHO05D002806 6.5e-21 105.1 209 39.2
Lalb_Chr15g0085871 Lupinus albus HOM05D003468 ORTHO05D002806 1.1e-20 104.4 228 37.3
Haze_24464 Corylus avellana HOM05D003468 ORTHO05D002806 5.9e-14 82.0 243 30.0
Dinv28729 Davidia involucrata HOM05D003468 ORTHO05D002806 6.5e-13 78.6 260 28.1
Rhsim01G0242800 Rhododendron simsii HOM05D003468 ORTHO05D002806 1.1e-12 77.8 232 29.3
vmacro10619 Vaccinium macrocarpon HOM05D003468 ORTHO05D002806 1.4e-12 77.4 226 28.8
GSVIVG01024564001 Vitis vinifera HOM05D003468 ORTHO05D002806 3.2e-12 76.3 204 33.8
SalBow2G1693 Salvia bowleyana HOM05D003468 ORTHO05D002806 9.4e-12 74.7 244 28.3
CSS0029508 Camellia sinensis var. sinensis HOM05D003468 ORTHO05D002806 1.2e-11 74.3 258 24.8
Dinv12277 Davidia involucrata HOM05D003468 ORTHO05D002806 1.6e-11 73.9 226 29.2
CiPaw.14G050900 Carya illinoinensis HOM05D003468 ORTHO05D002806 2.7e-11 73.2 250 29.6
Cfa021527 Carpinus fangiana HOM05D003468 ORTHO05D002806 3.6e-11 72.8 219 30.1
CANSAT54G1733 Cannabis sativa HOM05D003468 ORTHO05D002806 6.1e-11 72.0 218 28.9
Nitab4.5_0000002g0180 Nicotiana tabacum HOM05D003468 ORTHO05D002806 2.3e-10 70.1 224 29.5
QL01p024883 Quercus lobata HOM05D003468 ORTHO05D002806 3.0e-10 69.7 243 30.0
Nitab4.5_0002091g0050 Nicotiana tabacum HOM05D003468 ORTHO05D002806 5.1e-10 68.9 232 29.7
CANSAT25G2600 Cannabis sativa HOM05D003468 ORTHO05D002806 6.7e-10 68.6 211 30.3
Peaxi162Scf01078g00514 Petunia axillaris HOM05D003468 ORTHO05D002806 8.8e-10 68.2 230 29.6
MD03G1052200 Malus domestica HOM05D003468 ORTHO05D002806 1.1e-09 67.8 260 26.9
Sed0021873 Sechium edule HOM05D003468 ORTHO05D002806 4.4e-09 65.9 216 27.8
Nitab4.5_0002620g0010 Nicotiana tabacum HOM05D003468 ORTHO05D002806 7.4e-09 65.1 224 28.6
PGSC0003DMG400030385 Solanum tuberosum HOM05D003468 ORTHO05D002806 1.3e-08 64.3 223 29.6
Hma1.2p1_0170F.1_g075010 Hydrangea macrophylla HOM05D003468 ORTHO05D002806 1.7e-08 63.9 250 25.6
Aqoxy6G01245 Aquilegia oxysepala HOM05D003468 ORTHO05D002806 2.2e-08 63.5 179 29.6
CAN.G874.78 Capsicum annuum HOM05D003468 ORTHO05D002806 4.8e-08 62.4 226 28.3
PGR129G0007 Punica granatum HOM05D003468 ORTHO05D002806 6.3e-08 62.0 251 28.3
MSTRG.17916 Avicennia marina HOM05D003468 ORTHO05D002806 1.4e-07 60.8 209 31.1
Ciclev10028601m.g Citrus clementina HOM05D003468 ORTHO05D002806 1.4e-07 60.8 243 28.8
Medtr3g117790 Medicago truncatula HOM05D003468 ORTHO05D002806 1.4e-07 60.8 150 28.7
ClCG02G019040 Citrullus lanatus HOM05D003468 ORTHO05D002806 2.4e-07 60.1 213 28.6
Solyc06g082510.3 Solanum lycopersicum HOM05D003468 ORTHO05D002806 2.4e-07 60.1 214 29.9
MD11G1054300 Malus domestica HOM05D003468 ORTHO05D002806 3.1e-07 59.7 260 27.7
Aqoxy4G02393 Aquilegia oxysepala HOM05D003468 ORTHO05D002806 5.3e-07 58.9 180 30.6
CsaV3_6G013110 Cucumis sativus L. HOM05D003468 ORTHO05D002806 5.3e-07 58.9 205 30.7
Lj2A1101T50 Lonicera japonica HOM05D003468 ORTHO05D002806 5.3e-07 58.9 254 27.2
HanXRQChr16g0522621 Helianthus annuus HOM05D003468 ORTHO05D002806 9.1e-07 58.2 174 32.2
Nn3g19626 Nelumbo nucifera HOM05D003468 ORTHO05D002806 1.5e-06 57.4 193 29.5
MELO3C026878.2 Cucumis melo HOM05D003468 ORTHO05D002806 2.0e-06 57.0 206 30.1
Nitab4.5_0002759g0060 Nicotiana tabacum HOM05D003468 ORTHO05D002806 2.0e-06 57.0 233 29.2
Sopen06g033890 Solanum pennellii HOM05D003468 ORTHO05D002806 2.0e-06 57.0 212 28.8
Actinidia34492 Actinidia chinensis HOM05D003468 ORTHO05D002806 3.5e-06 56.2 262 25.6
Medtr3g116690 Medicago truncatula HOM05D003468 ORTHO05D002806 3.5e-06 56.2 150 27.3
QL02p099821 Quercus lobata HOM05D003468 ORTHO05D002806 5.9e-06 55.5 259 26.6
Sed0002722 Sechium edule HOM05D003468 ORTHO05D002806 5.9e-06 55.5 166 32.5
Psat5g003000 Pisum sativum HOM05D003468 ORTHO05D002806 7.7e-06 55.1 181 29.8


User provided reference genes

Program Settings