Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.0e-126 456.8 246 100.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.4e-125 450.7 246 89.0
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 6.7e-94 347.8 250 76.4
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 8.8e-94 347.4 251 71.3
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.5e-90 335.1 252 69.4
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.1e-88 330.5 248 73.0
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.5e-88 329.3 178 85.4
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 5.5e-88 328.2 176 84.1
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.4e-86 323.6 176 83.5
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 6.7e-86 321.2 259 63.3
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 2.0e-74 283.1 233 59.2
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.3e-73 280.4 175 71.4
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.6e-71 273.5 174 71.3
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.7e-71 271.9 177 70.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.0e-70 270.8 176 69.9
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 2.3e-70 269.6 181 69.1
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 4.0e-70 268.9 181 68.5
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 8.8e-70 267.7 175 69.7
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.2e-69 267.3 181 69.6
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.5e-69 266.9 178 69.7
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 4.4e-69 265.4 176 69.9
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 5.7e-69 265.0 201 62.2
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 5.7e-69 265.0 174 70.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.3e-68 263.8 174 70.1
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.2e-68 263.1 178 68.5
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 3.7e-68 262.3 176 69.9
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 4.9e-68 261.9 174 72.4
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 4.9e-68 261.9 178 67.4
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 4.9e-68 261.9 175 66.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.3e-68 261.2 176 69.9
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.1e-67 260.8 173 70.5
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.8e-67 260.0 176 69.3
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 3.1e-67 259.2 179 68.7
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.6e-66 256.9 178 65.2
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.6e-66 256.9 172 68.0
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.5e-66 255.8 176 64.8
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 4.5e-66 255.4 179 68.2
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 7.7e-66 254.6 173 69.4
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.0e-65 254.2 173 68.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.0e-65 254.2 174 64.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.3e-65 253.8 241 53.9
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.3e-65 253.1 173 65.3
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 2.9e-65 252.7 176 68.8
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.8e-65 252.3 175 67.4
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 5.0e-65 251.9 170 65.9
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 5.0e-65 251.9 177 66.1
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.0e-65 251.9 176 67.6
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 8.6e-65 251.1 178 67.4
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.5e-64 250.4 176 67.0
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.9e-64 250.0 174 68.4
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.3e-64 249.2 174 63.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 3.3e-64 249.2 181 64.1
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 9.5e-64 247.7 176 67.0
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 9.5e-64 247.7 183 65.0
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 2.1e-63 246.5 183 63.9
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.0e-62 244.2 177 60.5
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 1.0e-62 244.2 175 64.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.4e-62 243.8 179 67.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.8e-62 243.4 177 61.0
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.8e-62 243.4 173 63.6
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.0e-62 242.7 181 63.0
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 3.0e-62 242.7 181 63.0
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.0e-62 242.7 179 64.8
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 5.2e-62 241.9 172 64.5
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 8.9e-62 241.1 181 63.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 8.9e-62 241.1 179 62.6
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.2e-61 240.7 179 62.6
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.2e-61 240.7 179 63.7
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 2.6e-61 239.6 181 63.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.6e-61 239.6 179 62.6
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.7e-60 236.9 179 63.7
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 4.9e-60 235.3 177 58.8
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.8e-59 233.4 179 62.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 2.7e-58 229.6 177 59.3
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 8.6e-57 224.6 179 60.9
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 9.5e-56 221.1 123 80.5
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 3.1e-54 216.1 197 55.8
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 4.4e-53 212.2 181 55.8
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 4.4e-53 212.2 170 57.6
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.9e-52 208.8 180 58.3
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 4.6e-50 202.2 333 36.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 8.6e-49 198.0 178 52.8
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 2.5e-48 196.4 180 52.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 2.1e-47 193.4 177 52.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 4.0e-46 189.1 104 79.8
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 4.4e-45 185.7 181 49.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.7e-44 183.7 172 48.8
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.4e-43 179.9 119 77.3
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 9.5e-40 167.9 128 64.8
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 6.6e-33 145.2 86 73.3
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 2.1e-31 140.2 148 48.0
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.8e-31 139.8 119 58.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 2.4e-30 136.7 118 57.6
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.0e-25 121.3 131 61.8
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.5e-24 117.5 134 57.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 4.8e-15 85.9 52 67.3
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 2.4e-14 83.6 73 57.5
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 5.8e-13 79.0 59 57.6
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 4.9e-12 75.9 66 53.0


User provided reference genes

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