Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 2.2e-126 455.7 232 100.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 5.5e-122 441.0 230 96.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 5.9e-100 367.9 231 79.2
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.9e-99 365.5 231 78.8
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.3e-94 350.1 225 75.6
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.7e-94 349.7 231 74.5
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.8e-93 346.3 228 73.7
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.5e-92 341.7 225 74.2
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-91 340.1 227 73.1
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 9.5e-90 334.0 221 73.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 1.4e-88 330.1 229 68.1
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 4.0e-88 328.6 231 71.0
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 1.5e-87 326.6 228 70.6
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 6.4e-86 321.2 229 67.7
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.1e-85 320.5 229 67.7
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 5.4e-85 318.2 228 68.0
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 5.4e-85 318.2 228 67.5
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 7.0e-85 317.8 229 66.4
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.2e-84 317.0 248 65.7
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.0e-84 316.2 228 67.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 2.7e-84 315.8 228 67.5
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 4.6e-84 315.1 228 65.8
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 5.9e-84 314.7 228 68.0
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.3e-83 313.5 228 68.0
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.3e-83 312.8 228 67.5
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.0e-83 312.4 225 66.7
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 8.6e-83 310.8 228 68.4
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.1e-82 310.5 228 66.7
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.9e-82 309.7 229 66.4
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.3e-82 308.9 228 66.2
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 4.3e-82 308.5 212 69.3
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 5.6e-82 308.1 229 69.4
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 7.3e-82 307.8 229 64.2
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 1.2e-81 307.0 213 69.5
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 3.6e-81 305.4 228 65.4
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 4.7e-81 305.1 228 67.5
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 6.2e-81 304.7 228 64.9
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 6.2e-81 304.7 229 64.2
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 6.2e-81 304.7 228 65.8
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 2.3e-80 302.8 228 64.5
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.3e-80 302.8 228 63.2
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 4.0e-80 302.0 223 65.9
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 5.2e-80 301.6 228 64.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 8.9e-80 300.8 229 67.7
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 8.9e-80 300.8 229 63.3
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 2.6e-79 299.3 221 67.0
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 3.4e-79 298.9 228 64.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 4.4e-79 298.5 234 64.1
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 5.8e-79 298.1 232 64.7
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 9.8e-79 297.4 225 65.8
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 9.8e-79 297.4 215 67.4
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.8e-79 297.4 229 62.9
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-78 297.0 229 62.4
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.7e-78 296.6 229 65.9
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 2.2e-78 296.2 233 61.8
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.9e-78 295.0 229 62.4
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 8.3e-78 294.3 224 65.6
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.4e-77 293.5 223 64.6
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 3.2e-77 292.4 234 61.1
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.1e-77 292.0 228 63.6
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 5.4e-77 291.6 216 67.1
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 5.4e-77 291.6 229 62.0
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 7.0e-77 291.2 228 63.2
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.6e-76 290.0 228 63.2
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 7.8e-76 287.7 229 62.9
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 2.3e-75 286.2 229 60.7
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 5.0e-75 285.0 228 59.2
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 5.0e-75 285.0 239 60.3
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 6.6e-75 284.6 229 60.3
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.1e-74 283.9 229 62.9
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.2e-73 280.4 229 59.8
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.6e-73 280.0 226 61.9
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.1e-73 279.6 229 59.4
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.7e-73 278.5 229 58.5
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 6.2e-73 278.1 227 61.2
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 8.1e-73 277.7 229 59.0
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.8e-72 276.6 229 59.0
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.8e-72 276.6 229 59.0
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 4.0e-72 275.4 228 58.3
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 5.2e-72 275.0 229 58.5
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 1.5e-71 273.5 230 58.3
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 2.6e-71 272.7 231 59.3
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 4.4e-71 271.9 232 56.9
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 5.8e-71 271.6 212 60.8
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 7.5e-71 271.2 229 60.3
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 2.2e-70 269.6 228 59.6
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.9e-70 269.2 214 62.6
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.6e-68 263.5 216 62.0
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 6.0e-68 261.5 229 57.2
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.0e-67 260.8 222 58.6
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 3.0e-67 259.2 212 59.4
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 5.6e-66 255.0 207 58.9
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 1.2e-60 237.3 257 49.0
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.3e-58 228.8 180 61.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 4.4e-55 218.8 196 58.7
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 6.4e-54 214.9 150 70.7
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 7.8e-52 208.0 224 47.3
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.1e-50 204.1 149 69.1
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 7.3e-50 201.4 150 65.3
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.1e-44 183.3 210 43.8
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 6.9e-40 168.3 224 40.2
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.0e-39 166.8 229 43.2
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.6e-39 166.4 225 40.4
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 7.6e-39 164.9 150 55.3
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 4.9e-38 162.2 118 70.3
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 2.7e-36 156.4 128 59.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 2.8e-33 146.4 221 36.2
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.4e-32 144.1 218 36.2
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.7e-30 137.1 217 35.0
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 8.4e-30 134.8 92 69.6
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 2.7e-28 129.8 110 58.2
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 3.3e-26 122.9 161 46.0
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 7.9e-20 101.7 201 33.3
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.5e-18 96.7 72 61.1
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 2.3e-11 73.6 89 48.3
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 2.3e-11 73.6 89 48.3
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 3.4e-07 59.7 43 62.8
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 6.5e-06 55.5 35 68.6


User provided reference genes

Program Settings