Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZI8HJG Arachis hypogaea HOM05D005956 ORTHO05D007197 2.8e-31 137.9 66 100.0
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 2.0e-21 105.1 66 80.3
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 3.5e-21 104.4 66 78.8
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 1.0e-20 102.8 66 78.8
arahy.Tifrunner.gnm1.ann1.DBZ4H1 Arachis hypogaea HOM05D005956 ORTHO05D007197 2.3e-20 101.7 63 81.0
arahy.Tifrunner.gnm1.ann1.X81K0T Arachis hypogaea HOM05D005956 ORTHO05D007197 4.0e-17 90.9 56 82.1
arahy.Tifrunner.gnm1.ann1.X8CU4B Arachis hypogaea HOM05D005956 ORTHO05D007197 2.0e-16 88.6 63 71.4
Phvul.005G185600 Phaseolus vulgaris HOM05D005956 ORTHO05D007197 5.2e-09 63.9 62 56.5
Gohir.D06G117400 Gossypium hirsutum HOM05D005956 ORTHO05D007197 6.8e-09 63.5 65 47.7
Gorai.010G135000 Gossypium raimondii HOM05D005956 ORTHO05D007197 6.8e-09 63.5 65 47.7
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 6.8e-09 63.5 62 51.6
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 6.8e-09 63.5 62 51.6
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 8.9e-09 63.2 62 54.8
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 8.9e-09 63.2 65 49.2
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.2e-08 62.8 62 53.2
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 1.2e-08 62.8 62 56.5
Ciclev10013933m.g Citrus clementina HOM05D005956 ORTHO05D007197 1.5e-08 62.4 57 56.1
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 1.5e-08 62.4 65 50.8
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 1.5e-08 62.4 62 50.0
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 2.6e-08 61.6 62 48.4
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 2.6e-08 61.6 62 48.4
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 3.4e-08 61.2 62 53.2
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 3.4e-08 61.2 62 54.8
EL10Ac7g17213 Beta vulgaris HOM05D005956 ORTHO05D007197 4.4e-08 60.8 60 56.7
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 4.4e-08 60.8 62 50.0
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 7.5e-08 60.1 62 51.6
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 7.5e-08 60.1 60 48.3
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 9.8e-08 59.7 65 49.2
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 9.8e-08 59.7 62 46.8
AUR62019303 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.3e-07 59.3 62 46.8
arahy.Tifrunner.gnm1.ann1.85VD00 Arachis hypogaea HOM05D005956 ORTHO05D007197 1.7e-07 58.9 35 82.9
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 2.9e-07 58.2 62 50.0
Prupe.3G025200 Prunus persica HOM05D005956 ORTHO05D007197 3.7e-07 57.8 62 46.8
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 3.7e-07 57.8 62 51.6
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 4.9e-07 57.4 63 47.6
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 4.9e-07 57.4 55 54.5
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 4.9e-07 57.4 62 53.2
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 4.9e-07 57.4 54 53.7
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 6.4e-07 57.0 65 44.6
AUR62000122 Chenopodium quinoa HOM05D005956 ORTHO05D007197 8.3e-07 56.6 60 48.3
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 8.3e-07 56.6 62 48.4
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 1.1e-06 56.2 63 49.2
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 1.9e-06 55.5 63 47.6
Atru.chr1.2601 Acer truncatum HOM05D005956 ORTHO05D007197 2.4e-06 55.1 51 52.9
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 2.4e-06 55.1 60 48.3
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 2.4e-06 55.1 62 41.9
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 3.2e-06 54.7 54 50.0
CDE02G2643 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 3.2e-06 54.7 52 48.1
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.2e-06 54.7 60 46.7
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 4.1e-06 54.3 63 44.4
CANSAT01G3224 Cannabis sativa HOM05D005956 ORTHO05D007197 5.4e-06 53.9 62 41.9
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 5.4e-06 53.9 62 43.5
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 5.4e-06 53.9 54 50.0
SGA_v2.0_scaffold1097G53840 Striga asiatica HOM05D005956 ORTHO05D007197 9.2e-06 53.1 65 43.1
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 9.2e-06 53.1 65 43.1
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 9.2e-06 53.1 62 46.8


User provided reference genes

Program Settings