Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 3.4e-79 298.5 180 100.0
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 6.5e-70 267.7 167 98.8
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.5e-55 219.9 167 68.3
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.0e-55 219.5 167 79.6
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.3e-54 216.9 168 72.0
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.2e-54 216.1 167 70.1
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 4.2e-53 211.8 170 68.2
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 6.1e-52 208.0 178 69.1
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.8e-51 206.5 168 68.5
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.0e-50 203.0 170 72.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 4.4e-50 201.8 169 77.5
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 5.9e-47 191.4 128 78.9
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 5.0e-46 188.3 172 61.0
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.1e-45 187.2 183 62.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.1e-45 187.2 180 60.0
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.5e-45 186.8 175 65.1
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 3.2e-45 185.7 184 58.7
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 3.2e-45 185.7 183 59.6
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 5.5e-45 184.9 174 61.5
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 5.5e-45 184.9 182 61.5
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 5.5e-45 184.9 171 63.2
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 9.4e-45 184.1 176 60.2
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 9.4e-45 184.1 127 73.2
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.1e-44 183.0 174 60.9
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.7e-44 182.6 127 72.4
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 3.6e-44 182.2 130 73.8
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 8.0e-44 181.0 178 57.3
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.8e-43 179.9 174 60.3
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 2.3e-43 179.5 178 61.8
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 2.3e-43 179.5 168 66.7
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 5.2e-43 178.3 177 57.1
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 8.8e-43 177.6 168 66.7
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 3.3e-42 175.6 174 64.4
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 9.7e-42 174.1 183 56.3
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.3e-41 173.7 174 66.7
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.2e-41 172.9 127 72.4
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.2e-41 172.9 179 57.5
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 3.7e-41 172.2 168 66.1
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 4.8e-41 171.8 173 60.1
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 8.2e-41 171.0 168 58.3
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.4e-40 170.2 173 63.0
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.1e-40 169.1 177 54.2
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 3.1e-40 169.1 127 70.1
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.2e-39 167.2 169 68.0
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 3.5e-39 165.6 176 52.8
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 4.5e-39 165.2 167 59.9
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 5.9e-39 164.9 126 66.7
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.9e-38 162.5 182 56.6
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 3.8e-38 162.2 181 53.0
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.9e-37 159.8 127 68.5
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 3.2e-37 159.1 170 58.8
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 3.2e-37 159.1 189 52.4
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 6.1e-36 154.8 121 69.4
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 4.0e-35 152.1 127 64.6
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 4.0e-35 152.1 128 68.8
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 4.0e-35 152.1 175 52.0
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 3.7e-33 145.6 175 50.3
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 1.4e-32 143.7 133 57.9
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 4.1e-32 142.1 130 59.2
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 5.4e-32 141.7 133 57.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 5.4e-32 141.7 129 63.6
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 5.4e-32 141.7 177 60.5
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 9.1e-32 141.0 112 68.8
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.6e-31 140.2 134 58.2
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.5e-31 139.0 133 56.4
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 3.5e-31 139.0 133 56.4
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.5e-31 139.0 133 56.4
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.5e-31 139.0 133 56.4
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 3.5e-31 139.0 133 56.4
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 4.5e-31 138.7 133 56.4
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 5.9e-31 138.3 194 47.4
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 7.7e-31 137.9 107 76.6
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 7.7e-31 137.9 133 57.1
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.3e-30 137.1 134 55.2
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 2.9e-30 136.0 177 53.1
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 5.0e-30 135.2 133 54.9
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 6.5e-30 134.8 133 54.9
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 6.5e-30 134.8 131 57.3
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 6.5e-30 134.8 128 54.7
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 4.2e-29 132.1 182 45.1
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 5.5e-29 131.7 177 46.9
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 8.0e-28 127.9 120 63.3
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.0e-28 127.9 176 55.1
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 6.8e-27 124.8 132 59.1
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 5.7e-26 121.7 125 57.6
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 7.5e-26 121.3 181 43.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.7e-25 120.2 184 45.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 2.2e-25 119.8 167 50.9
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 7.0e-24 114.8 178 49.4
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.2e-23 114.0 148 48.6
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 1.2e-23 114.0 144 49.3
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 2.7e-23 112.8 183 45.9
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 4.5e-23 112.1 167 49.1
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 4.5e-23 112.1 125 48.8
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 2.9e-22 109.4 181 43.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 9.5e-21 104.4 178 49.4
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.8e-19 100.1 77 75.3
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 3.4e-18 95.9 140 45.0
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 7.0e-16 88.2 74 68.9
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.6e-14 81.3 132 43.2
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 8.6e-14 81.3 78 52.6
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 8.6e-14 81.3 180 36.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.1e-13 80.9 137 40.9
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 2.5e-13 79.7 133 42.1
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 4.3e-13 79.0 176 39.8
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.5e-10 70.5 132 39.4
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.6e-10 69.7 170 38.8
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.4e-08 63.9 132 37.1


User provided reference genes

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