Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 2.4e-53 211.8 104 100.0
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 1.3e-41 172.9 91 92.3
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 1.1e-40 169.9 91 90.1
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 3.1e-40 168.3 94 86.2
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 2.6e-39 165.2 91 87.9
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 1.4e-37 159.5 92 82.6
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 9.3e-37 156.8 91 82.4
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 2.1e-36 155.6 91 83.5
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 2.1e-36 155.6 91 80.2
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 6.0e-36 154.1 91 80.2
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 7.9e-36 153.7 91 80.2
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 1.3e-35 152.9 90 82.2
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 1.1e-34 149.8 91 80.2
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 4.3e-34 147.9 91 76.9
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 7.4e-34 147.1 91 75.8
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 9.6e-34 146.7 91 74.7
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 2.1e-33 145.6 91 74.7
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 3.7e-33 144.8 91 74.7
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 8.1e-33 143.7 91 70.3
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 8.1e-33 143.7 91 73.6
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 4.0e-32 141.4 91 73.6
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 5.3e-32 141.0 91 72.5
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 5.3e-32 141.0 91 73.6
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 6.9e-32 140.6 91 71.4
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 6.9e-32 140.6 91 71.4
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 9.0e-32 140.2 91 69.2
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 9.0e-32 140.2 91 70.3
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 9.0e-32 140.2 91 70.3
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 1.2e-31 139.8 91 69.2
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.5e-31 139.4 91 70.3
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 2.0e-31 139.0 91 71.4
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 2.6e-31 138.7 91 69.2
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 4.5e-31 137.9 91 69.2
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 4.5e-31 137.9 91 69.2
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 4.5e-31 137.9 91 68.1
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 4.5e-31 137.9 91 69.2
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 5.8e-31 137.5 91 69.2
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 5.8e-31 137.5 91 71.4
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 7.6e-31 137.1 91 70.3
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 1.0e-30 136.7 91 68.1
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 1.3e-30 136.3 91 68.1
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.3e-30 136.3 91 70.3
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.2e-30 135.6 91 67.0
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 2.9e-30 135.2 91 65.9
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 2.9e-30 135.2 91 68.1
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 2.9e-30 135.2 91 68.1
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 2.9e-30 135.2 91 69.2
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 3.8e-30 134.8 91 68.1
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 6.5e-30 134.0 91 65.9
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 8.4e-30 133.7 91 68.1
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 1.1e-29 133.3 91 67.0
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 1.4e-29 132.9 91 67.0
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 1.9e-29 132.5 91 68.1
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 1.9e-29 132.5 91 68.1
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 1.9e-29 132.5 91 68.1
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 1.9e-29 132.5 91 68.1
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.9e-29 132.5 85 70.6
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 2.5e-29 132.1 91 67.0
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 3.2e-29 131.7 91 65.9
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 4.2e-29 131.3 91 65.9
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 5.5e-29 131.0 91 65.9
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 5.5e-29 131.0 91 65.9
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 5.5e-29 131.0 100 63.0
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 5.5e-29 131.0 90 67.8
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 9.3e-29 130.2 89 67.4
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 9.3e-29 130.2 91 63.7
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 1.2e-28 129.8 91 67.0
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 1.2e-28 129.8 91 64.8
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 1.2e-28 129.8 91 64.8
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 2.1e-28 129.0 91 65.9
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 2.7e-28 128.6 89 66.3
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 3.5e-28 128.3 91 65.9
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 4.6e-28 127.9 91 62.6
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 1.3e-27 126.3 91 65.9
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 1.3e-27 126.3 91 63.7
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 3.9e-27 124.8 89 64.0
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 5.1e-27 124.4 90 64.4
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 1.5e-26 122.9 91 59.3
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 3.3e-26 121.7 90 64.4
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 5.7e-26 120.9 88 59.1
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 7.4e-26 120.6 89 62.9
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 2.1e-25 119.0 90 60.0
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 4.8e-25 117.9 104 56.7
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 4.8e-25 117.9 91 54.9
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea HOM05D006034 ORTHO05D005279 1.8e-24 115.9 65 86.2
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 2.0e-23 112.5 92 56.5
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 4.5e-23 111.3 91 56.0
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 7.6e-23 110.5 143 45.5
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 5.0e-22 107.8 63 79.4
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 2.5e-21 105.5 66 71.2
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 4.2e-21 104.8 62 74.2
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 1.2e-20 103.2 62 77.4
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 2.1e-20 102.4 81 58.0
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 1.3e-19 99.8 66 71.2
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 1.3e-19 99.8 62 72.6
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 8.7e-19 97.1 65 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 1.9e-18 95.9 77 54.5
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 1.9e-18 95.9 56 83.9
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea HOM05D006034 ORTHO05D007535 4.3e-18 94.7 51 88.2
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 5.7e-18 94.4 87 48.3
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 2.2e-17 92.4 64 67.2
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 1.7e-14 82.8 50 74.0
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 2.2e-14 82.4 64 60.9
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 7.9e-12 73.9 52 61.5
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 1.4e-11 73.2 91 44.0
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 5.1e-11 71.2 91 44.0
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 9.7e-10 67.0 46 63.0
Haze_27155 Corylus avellana HOM05D003386 ORTHO05D007535 1.7e-09 66.2 70 41.4
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 1.2e-07 60.1 52 53.8
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 1.5e-07 59.7 35 71.4
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 3.4e-07 58.5 28 89.3
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 1.7e-06 56.2 42 61.9
arahy.Tifrunner.gnm1.ann1.45FEHG Arachis hypogaea HOM05D004808 ORTHO05D005279 5.0e-06 54.7 27 96.3
arahy.Tifrunner.gnm1.ann1.7H2MWE Arachis hypogaea HOM05D006034 ORTHO05D084916 5.0e-06 54.7 29 89.7


User provided reference genes

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