Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ZB4QDD Arachis hypogaea HOM05D002441 ORTHO05D002376 5.5e-195 684.1 339 100.0
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-132 476.1 470 56.6
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.6e-104 382.9 341 61.0
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 6.2e-98 361.7 452 45.4
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-95 353.2 470 44.0
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 7.1e-94 348.2 470 44.3
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 7.6e-88 328.2 445 44.0
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-84 316.2 429 43.1
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.3e-83 312.4 474 40.5
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.8e-81 307.0 474 39.7
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 2.4e-81 306.6 444 42.8
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-80 304.3 445 42.7
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.8e-79 299.3 434 42.2
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-76 289.7 410 39.8
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 5.6e-75 285.4 402 41.0
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.8e-72 275.4 447 39.4
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-65 254.6 439 39.9
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-59 234.6 231 54.5
arahy.Tifrunner.gnm1.ann1.EPMR0G Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-56 224.6 368 38.3
arahy.Tifrunner.gnm1.ann1.I3CTXH Arachis hypogaea HOM05D002441 ORTHO05D002376 8.5e-55 218.4 454 33.5
arahy.Tifrunner.gnm1.ann1.RLQ2A3 Arachis hypogaea HOM05D002441 ORTHO05D008317 1.4e-46 191.0 386 35.2
arahy.Tifrunner.gnm1.ann1.36ZJIB Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-46 190.3 400 37.8
arahy.Tifrunner.gnm1.ann1.CIC8LF Arachis hypogaea HOM05D002441 ORTHO05D002376 4.5e-40 169.5 446 31.6
arahy.Tifrunner.gnm1.ann1.54XB95 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-39 167.9 369 34.7
arahy.Tifrunner.gnm1.ann1.F76963 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-38 164.5 124 63.7
arahy.Tifrunner.gnm1.ann1.H67YCB Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-34 150.2 140 58.6
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 5.5e-30 136.0 387 27.1
arahy.Tifrunner.gnm1.ann1.D8EMDP Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-29 134.8 130 54.6
arahy.Tifrunner.gnm1.ann1.BHW5G9 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.8e-28 131.0 450 24.2
arahy.Tifrunner.gnm1.ann1.AJ0GPW Arachis hypogaea HOM05D002441 ORTHO05D008317 3.0e-28 130.2 126 53.2
arahy.Tifrunner.gnm1.ann1.XQZ42W Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-28 130.2 450 24.2
arahy.Tifrunner.gnm1.ann1.II26ZH Arachis hypogaea HOM05D002441 ORTHO05D008317 5.2e-28 129.4 124 54.8
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.0e-27 127.5 386 26.7
arahy.Tifrunner.gnm1.ann1.1X530R Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-24 118.2 454 24.0
arahy.Tifrunner.gnm1.ann1.2IU5IN Arachis hypogaea HOM05D002441 ORTHO05D002376 7.7e-24 115.5 208 34.6
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-23 114.8 398 26.4
arahy.Tifrunner.gnm1.ann1.521VL4 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-21 107.5 383 26.6
arahy.Tifrunner.gnm1.ann1.3JX2I6 Arachis hypogaea HOM05D002441 ORTHO05D002376 8.0e-21 105.5 382 24.1
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 1.8e-20 104.4 311 25.4
arahy.Tifrunner.gnm1.ann1.K3U0KS Arachis hypogaea HOM05D002441 ORTHO05D002376 6.8e-20 102.4 194 32.5
arahy.Tifrunner.gnm1.ann1.U768Z5 Arachis hypogaea HOM05D002441 ORTHO05D002376 8.9e-20 102.1 319 25.7
arahy.Tifrunner.gnm1.ann1.HC104Q Arachis hypogaea HOM05D002441 ORTHO05D002376 1.2e-19 101.7 368 25.3
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-18 97.4 165 36.4
arahy.Tifrunner.gnm1.ann1.QVIY92 Arachis hypogaea HOM05D042284 ORTHO05D002376 4.9e-18 96.3 125 41.6
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-17 94.7 340 25.0
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 4.1e-17 93.2 319 25.1
arahy.Tifrunner.gnm1.ann1.8UD0T6 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.0e-16 90.9 141 38.3
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 2.7e-16 90.5 127 37.8
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.5e-16 90.1 216 27.8
arahy.Tifrunner.gnm1.ann1.6U7VQG Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-15 87.4 147 36.1
arahy.Tifrunner.gnm1.ann1.KLUJ4I Arachis hypogaea HOM05D002441 ORTHO05D002376 3.9e-15 86.7 100 46.0
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.0e-15 86.3 375 23.5
arahy.Tifrunner.gnm1.ann1.0E3QWF Arachis hypogaea HOM05D002441 ORTHO05D002376 8.6e-15 85.5 343 25.4
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 1.5e-14 84.7 220 28.6
arahy.Tifrunner.gnm1.ann1.WU3HS2 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.6e-14 82.8 226 26.1
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.5e-14 82.0 274 24.8
Peaxi162Scf00261g00059 Petunia axillaris HOM05D002441 ORTHO05D002376 9.5e-14 82.0 220 28.2
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 2.1e-13 80.9 220 27.7
arahy.Tifrunner.gnm1.ann1.8VM6NG Arachis hypogaea HOM05D002441 ORTHO05D008317 2.8e-13 80.5 85 45.9
Peaxi162Scf00103g00815 Petunia axillaris HOM05D002441 ORTHO05D002376 3.6e-13 80.1 220 27.3
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 6.1e-13 79.3 221 28.1
arahy.Tifrunner.gnm1.ann1.33R3MR Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-12 78.2 197 28.4
arahy.Tifrunner.gnm1.ann1.GB31PP Arachis hypogaea HOM05D002441 ORTHO05D008317 2.3e-12 77.4 193 26.4
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 3.1e-12 77.0 295 25.4
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-12 77.0 281 22.8
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 4.0e-12 76.6 262 27.5
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 4.0e-12 76.6 203 29.1
CAN.G358.51 Capsicum annuum HOM05D002441 ORTHO05D002376 2.0e-11 74.3 146 32.2
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.6e-11 73.9 108 33.3
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 2.6e-11 73.9 148 31.8
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.8e-11 72.0 101 36.6
arahy.Tifrunner.gnm1.ann1.M437Z4 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.7e-10 71.2 141 34.0
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 1.7e-10 71.2 268 25.7
ECA248G0798 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.7e-10 71.2 331 23.3
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-10 71.2 101 35.6
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-10 71.2 223 26.5
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 1.7e-10 71.2 243 24.3
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.2e-10 70.9 101 35.6
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.9e-10 69.7 260 23.1
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.9e-10 69.7 100 35.0
ECA238G1979 Erigeron canadensis HOM05D003964 ORTHO05D000174 6.4e-10 69.3 331 23.0
Peaxi162Scf00496g00410 Petunia axillaris HOM05D002441 ORTHO05D008317 8.3e-10 68.9 105 30.5
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-09 68.6 183 26.2
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 4.1e-09 66.6 399 23.1
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 5.4e-09 66.2 127 31.5
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 7.0e-09 65.9 36 72.2
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 7.0e-09 65.9 406 20.4
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.0e-09 65.9 101 32.7
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 7.0e-09 65.9 146 28.1
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 9.2e-09 65.5 316 23.1
arahy.Tifrunner.gnm1.ann1.19G1TH Arachis hypogaea HOM05D002441 ORTHO05D008317 1.2e-08 65.1 127 29.9
Nitab4.5_0003780g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-08 64.7 89 34.8
CAN.G849.8 Capsicum annuum HOM05D002441 ORTHO05D002376 2.0e-08 64.3 135 28.1
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 2.0e-08 64.3 128 30.5
arahy.Tifrunner.gnm1.ann1.B21KL8 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.6e-08 63.2 69 43.5
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.6e-08 63.2 182 25.3
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 6.0e-08 62.8 328 22.9
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.8e-08 62.4 100 35.0
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 1.3e-07 61.6 125 31.2
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.3e-07 61.6 330 22.4
AL7G20110 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.3e-07 60.8 170 29.4
LjContig00141g0021501 Lotus japonicus HOM05D024106 ORTHO05D002376 2.3e-07 60.8 152 29.6
arahy.Tifrunner.gnm1.ann1.G5SCHJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-07 60.5 67 43.3
Lj1g0002106 Lotus japonicus HOM05D024106 ORTHO05D002376 3.9e-07 60.1 152 28.9
Lj3g0027323 Lotus japonicus HOM05D024106 ORTHO05D002376 3.9e-07 60.1 152 28.9
Nitab4.5_0010449g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.6e-07 59.3 107 31.8
Thhalv10029157m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.6e-07 58.9 346 22.5
Medtr5g057125 Medicago truncatula HOM05D000353 ORTHO05D002376 1.1e-06 58.5 135 27.4
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 1.1e-06 58.5 122 30.3
Peaxi162Scf00588g00038 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-06 58.5 109 32.1
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-06 57.8 145 29.0
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.9e-06 57.8 122 27.0
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-06 57.4 152 27.0
Nitab4.5_0000939g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.5e-06 57.4 77 33.8
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 2.5e-06 57.4 311 21.2
CAN.G411.8 Capsicum annuum HOM05D002441 ORTHO05D002376 3.3e-06 57.0 82 39.0
Peaxi162Scf00070g00086 Petunia axillaris HOM05D002441 ORTHO05D002376 3.3e-06 57.0 118 32.2
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 56.6 356 23.6
Nitab4.5_0000935g0200 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.3e-06 56.6 76 34.2
Nitab4.5_0004197g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.6e-06 56.2 88 35.2
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.6e-06 56.2 97 35.1
Nitab4.5_0014949g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.6e-06 56.2 77 36.4
BcaB07g32743 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-06 55.8 101 31.7
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-06 55.8 369 22.2
TPR.G13367 Trifolium pratense HOM05D008036 ORTHO05D000174 7.3e-06 55.8 124 30.6
arahy.Tifrunner.gnm1.ann1.GEUR3Z Arachis hypogaea HOM05D002441 ORTHO05D002376 9.5e-06 55.5 76 36.8
Peaxi162Scf00156g00109 Petunia axillaris HOM05D002441 ORTHO05D002376 9.5e-06 55.5 104 32.7


User provided reference genes

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