Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z8S8NK Arachis hypogaea HOM05D004241 ORTHO05D006031 5.7e-150 534.3 275 100.0
arahy.Tifrunner.gnm1.ann1.8A66NB Arachis hypogaea HOM05D004241 ORTHO05D006031 4.4e-126 454.9 372 69.6
Glyma.07G152300 Glycine max HOM05D004241 ORTHO05D006031 9.1e-116 420.6 379 64.4
VMungo1383G0980 Vigna mungo HOM05D004241 ORTHO05D006031 1.2e-115 420.2 379 64.4
Lj1g0026131 Lotus japonicus HOM05D004241 ORTHO05D006031 3.5e-115 418.7 381 63.8
TPR.G35446 Trifolium pratense HOM05D004241 ORTHO05D006031 1.0e-114 417.2 380 63.9
Glyma.18G203400 Glycine max HOM05D004241 ORTHO05D006031 1.7e-114 416.4 379 63.9
Phvul.008G096500 Phaseolus vulgaris HOM05D004241 ORTHO05D006031 8.5e-114 414.1 379 63.9
Ca_07660_v3 Cicer arietinum L. HOM05D004241 ORTHO05D006031 7.2e-113 411.0 381 62.7
Lalb_Chr19g0124421 Lupinus albus HOM05D004241 ORTHO05D006031 4.7e-112 408.3 382 62.6
Sc07g0006700 Simmondsia chinensis HOM05D004241 ORTHO05D006031 4.7e-112 408.3 349 64.8
Gohir.D04G132200 Gossypium hirsutum HOM05D004241 ORTHO05D006031 1.0e-111 407.1 342 65.8
Gohir.A04G092900 Gossypium hirsutum HOM05D004241 ORTHO05D006031 1.8e-111 406.4 344 65.4
Eucgr.A00535 Eucalyptus grandis HOM05D004241 ORTHO05D006031 1.5e-110 403.3 342 64.9
Medtr7g069210 Medicago truncatula HOM05D004241 ORTHO05D006031 2.0e-110 402.9 380 62.1
Gorai.012G116000 Gossypium raimondii HOM05D004241 ORTHO05D006031 2.6e-110 402.5 343 65.6
MD00G1061800 Malus domestica HOM05D004241 ORTHO05D006031 2.6e-110 402.5 378 62.2
CiPaw.09G211300 Carya illinoinensis HOM05D004241 ORTHO05D006031 3.4e-110 402.1 376 62.0
CSS0018345 Camellia sinensis var. sinensis HOM05D004241 ORTHO05D006031 7.5e-110 401.0 374 60.4
MELO3C026000.2 Cucumis melo HOM05D004241 ORTHO05D006031 2.2e-109 399.4 370 62.7
Nn2g10892 Nelumbo nucifera HOM05D004241 ORTHO05D006031 2.2e-109 399.4 342 64.3
QL07p035079 Quercus lobata HOM05D004241 ORTHO05D006031 4.9e-109 398.3 351 63.5
GSVIVG01011187001 Vitis vinifera HOM05D004241 ORTHO05D006031 4.9e-109 398.3 373 62.5
Dinv13159 Davidia involucrata HOM05D004241 ORTHO05D006031 6.3e-109 397.9 374 61.0
Nn2g13169 Nelumbo nucifera HOM05D004241 ORTHO05D006031 8.3e-109 397.5 347 63.4
Thecc.05G012600 Theobroma cacao HOM05D004241 ORTHO05D006031 8.3e-109 397.5 342 64.0
Ciclev10011985m.g Citrus clementina HOM05D004241 ORTHO05D006031 1.1e-108 397.1 352 62.2
Atru.chr8.2269 Acer truncatum HOM05D004241 ORTHO05D006031 1.8e-108 396.4 383 60.8
PGR031G0770 Punica granatum HOM05D004241 ORTHO05D006031 1.8e-108 396.4 358 62.8
Sabra06G0078400 Salix brachista HOM05D004241 ORTHO05D006031 1.8e-108 396.4 357 64.1
CANSAT35G0589 Cannabis sativa HOM05D004241 ORTHO05D006031 5.4e-108 394.8 374 61.8
CiPaw.10G157700 Carya illinoinensis HOM05D004241 ORTHO05D006031 1.2e-107 393.7 372 61.3
Potri.006G102100 Populus trichocarpa HOM05D004241 ORTHO05D006031 1.2e-107 393.7 371 61.5
TWI74G0606 Tripterygium wilfordii HOM05D004241 ORTHO05D006031 1.2e-107 393.7 378 61.9
TAR636G3470 Trochodendron aralioides HOM05D004241 ORTHO05D006031 4.5e-107 391.7 376 62.0
Prupe.6G280100 Prunus persica HOM05D004241 ORTHO05D006031 5.9e-107 391.3 377 60.7
CsaV3_4G026340 Cucumis sativus L. HOM05D004241 ORTHO05D006031 7.7e-107 391.0 374 60.7
RcHm_v2.0_Chr3g0462631 Rosa chinensis HOM05D004241 ORTHO05D006031 7.7e-107 391.0 354 62.4
THA.LOC104805975 Tarenaya hassleriana HOM05D004241 ORTHO05D006031 1.3e-106 390.2 364 61.0
Potri.016G119400 Populus trichocarpa HOM05D004241 ORTHO05D006031 3.8e-106 388.7 373 60.3
Psat3g126440 Pisum sativum HOM05D004241 ORTHO05D006031 5.0e-106 388.3 373 60.9
CARHR161450 Cardamine hirsuta HOM05D004241 ORTHO05D006031 6.6e-106 387.9 351 61.8
Oeu017800.1 Olea europaea HOM05D004241 ORTHO05D006031 6.6e-106 387.9 372 58.6
Aqoxy2G00847 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 8.6e-106 387.5 344 62.8
Migut.J00141 Erythranthe guttata HOM05D004241 ORTHO05D006031 8.6e-106 387.5 363 59.2
BolC1t02821H Brassica oleracea HOM05D004241 ORTHO05D006031 2.5e-105 386.0 361 59.3
Sed0025380 Sechium edule HOM05D004241 ORTHO05D006031 2.5e-105 386.0 374 60.7
Cc06_g01120 Coffea canephora HOM05D004241 ORTHO05D006031 3.3e-105 385.6 366 60.1
PGSC0003DMG400008481 Solanum tuberosum HOM05D004241 ORTHO05D006031 3.3e-105 385.6 349 61.0
Nitab4.5_0000261g0130 Nicotiana tabacum HOM05D004241 ORTHO05D006031 5.5e-105 384.8 348 62.1
Sopen09g007610 Solanum pennellii HOM05D004241 ORTHO05D006031 5.5e-105 384.8 349 60.7
FAN09G0733 Fragaria x ananassa HOM05D004241 ORTHO05D006031 9.5e-105 384.0 343 62.1
HanXRQChr06g0182231 Helianthus annuus HOM05D004241 ORTHO05D006031 1.2e-104 383.6 347 61.1
MD12G1171900 Malus domestica HOM05D004241 ORTHO05D006031 1.2e-104 383.6 343 62.7
Lj3A950T42 Lonicera japonica HOM05D004241 ORTHO05D006031 1.6e-104 383.3 343 61.5
BcaC09g50106 Brassica carinata HOM05D004241 ORTHO05D006031 2.1e-104 382.9 361 59.0
AL5G32280 Arabidopsis lyrata HOM05D004241 ORTHO05D006031 2.8e-104 382.5 343 61.8
DCAR_015394 Daucus carota HOM05D004241 ORTHO05D006031 2.8e-104 382.5 376 58.8
Thhalv10010408m.g Eutrema salsugineum HOM05D004241 ORTHO05D006031 2.8e-104 382.5 346 61.3
BcaB01g00474 Brassica carinata HOM05D004241 ORTHO05D006031 3.6e-104 382.1 389 57.8
Hma1.2p1_0362F.1_g136490 Hydrangea macrophylla HOM05D004241 ORTHO05D006031 3.6e-104 382.1 377 59.2
BraA01t02235Z Brassica rapa HOM05D004241 ORTHO05D006031 4.7e-104 381.7 338 61.8
Dinv05780 Davidia involucrata HOM05D004241 ORTHO05D006031 4.7e-104 381.7 376 57.4
Hund14874 Selenicereus undatus HOM05D004241 ORTHO05D006031 4.7e-104 381.7 353 59.8
Aa31LG10G9090 Aethionema arabicum HOM05D004241 ORTHO05D006031 6.1e-104 381.3 362 60.2
ATR0681G392 Amborella trichopoda HOM05D004241 ORTHO05D006031 6.1e-104 381.3 345 61.2
AT3G51820 Arabidopsis thaliana HOM05D004241 ORTHO05D006031 8.0e-104 380.9 351 60.7
MSTRG.18996 Avicennia marina HOM05D004241 ORTHO05D006031 8.0e-104 380.9 377 57.6
Sp5g10450 Schrenkiella parvula HOM05D004241 ORTHO05D006031 8.0e-104 380.9 346 61.3
EL10Ac5g12540 Beta vulgaris HOM05D004241 ORTHO05D006031 1.0e-103 380.6 343 61.5
BcaNung00368 Brassica carinata HOM05D004241 ORTHO05D006031 1.0e-103 380.6 339 61.9
Carub.0005s1817 Capsella rubella HOM05D004241 ORTHO05D006031 1.4e-103 380.2 359 59.9
Dinv04461 Davidia involucrata HOM05D004241 ORTHO05D006031 1.4e-103 380.2 375 57.6
AUR62030817 Chenopodium quinoa HOM05D004241 ORTHO05D006031 1.8e-103 379.8 342 60.5
BcaB01g00414 Brassica carinata HOM05D004241 ORTHO05D006031 2.3e-103 379.4 343 61.2
A09p44970 Brassica napus HOM05D004241 ORTHO05D006031 1.2e-102 377.1 341 61.3
BolC8t50320H Brassica oleracea HOM05D004241 ORTHO05D006031 1.5e-102 376.7 386 57.5
PSO801G0614 Papaver somniferum HOM05D004241 ORTHO05D006031 2.0e-102 376.3 343 62.1
Actinidia05359 Actinidia chinensis HOM05D004241 ORTHO05D006031 2.6e-102 375.9 353 59.8
C08p27050 Brassica napus HOM05D004241 ORTHO05D006031 4.4e-102 375.2 341 61.0
CDE04G1685 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 1.3e-101 373.6 347 59.4
Oeu038754.1 Olea europaea HOM05D004241 ORTHO05D006031 2.2e-101 372.9 363 56.2
PSO339G5814 Papaver somniferum HOM05D004241 ORTHO05D006031 2.2e-101 372.9 372 58.6
Dinv01710 Davidia involucrata HOM05D004241 ORTHO05D006031 2.9e-101 372.5 376 56.9
TAR633G2528 Trochodendron aralioides HOM05D004241 ORTHO05D006031 1.1e-100 370.5 355 58.9
CAN.G283.14 Capsicum annuum HOM05D004241 ORTHO05D006031 1.4e-100 370.2 359 59.1
COL.COLO4_03385 Corchorus olitorius HOM05D004241 ORTHO05D006031 2.4e-100 369.4 294 70.7
Rhsim04G0126500 Rhododendron simsii HOM05D004241 ORTHO05D006031 3.2e-100 369.0 339 61.1
SEGI_30165 Sequoiadendron giganteum HOM05D004241 ORTHO05D006031 4.1e-100 368.6 347 59.7
Os05g0349700 Oryza sativa ssp. japonica HOM05D004241 ORTHO05D006031 9.2e-100 367.5 346 61.0
CDE08G0537 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 1.2e-99 367.1 347 58.2
Manes.09G106900 Manihot esculenta HOM05D004241 ORTHO05D006031 2.0e-99 366.3 333 61.9
HPP92_013785 Vanilla planifolia HOM05D004241 ORTHO05D006031 5.9e-99 364.8 342 59.9
ECA236G0379 Erigeron canadensis HOM05D000031 ORTHO05D006031 1.3e-98 363.6 345 60.0
Duzib093G0784 Durio zibethinus HOM05D004241 ORTHO05D006031 2.3e-98 362.8 315 65.4
unitig_578.g15901 Utricularia gibba HOM05D004241 ORTHO05D006031 1.5e-97 360.1 386 54.4
Duzib128G1618 Durio zibethinus HOM05D004241 ORTHO05D006031 2.1e-96 356.3 352 58.8
Sabra16G0115300 Salix brachista HOM05D004241 ORTHO05D006031 8.0e-96 354.4 336 59.8
FAN02G4369 Fragaria x ananassa HOM05D004241 ORTHO05D006031 5.2e-95 351.7 322 60.6
BraA09t39957Z Brassica rapa HOM05D004241 ORTHO05D006031 6.8e-95 351.3 326 59.8
FvH4_6g11190 Fragaria vesca HOM05D004241 ORTHO05D006031 1.5e-94 350.1 322 60.6
Lj2C71T11 Lonicera japonica HOM05D004241 ORTHO05D006031 1.3e-93 347.1 346 57.8
ClCG04G006920 Citrullus lanatus HOM05D004241 ORTHO05D006031 2.9e-93 345.9 389 53.7
Glyma.16G098000 Glycine max HOM05D004241 ORTHO05D006031 2.9e-93 345.9 185 93.5
Haze_21025 Corylus avellana HOM05D004241 ORTHO05D006031 1.9e-92 343.2 416 51.7
AUR62030480 Chenopodium quinoa HOM05D004241 ORTHO05D006031 3.2e-92 342.4 315 60.3
C01p28890 Brassica napus HOM05D003030 ORTHO05D006031 5.4e-92 341.7 369 53.7
Solyc09g014760.4 Solanum lycopersicum HOM05D004241 ORTHO05D006031 5.4e-92 341.7 185 90.8
FAN14G2181 Fragaria x ananassa HOM05D004241 ORTHO05D006031 1.6e-91 340.1 185 90.8
FAN05G3727 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.0e-91 339.7 185 90.3
Lsat_1_v5_gn_8_101501 Lactuca sativa HOM05D004241 ORTHO05D006031 3.5e-91 339.0 318 59.1
A01p23250 Brassica napus HOM05D003030 ORTHO05D006031 1.7e-90 336.7 346 55.5
Peaxi162Scf00890g00119 Petunia axillaris HOM05D004241 ORTHO05D006031 2.3e-90 336.3 303 60.1
MBI15_g19417_MAGBIO Magnolia biondii HOM05D004241 ORTHO05D006031 3.0e-90 335.9 367 54.0
Mapoly0045s0080 Marchantia polymorpha HOM05D004241 ORTHO05D006031 1.1e-87 327.4 335 55.2
vmacro08890 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 2.0e-86 323.2 502 45.2
arahy.Tifrunner.gnm1.ann1.F5Z0S5 Arachis hypogaea HOM05D004241 ORTHO05D006031 4.4e-86 322.0 384 51.6
PSO339G4053 Papaver somniferum HOM05D004241 ORTHO05D006031 1.3e-85 320.5 337 52.5
Nitab4.5_0008676g0010 Nicotiana tabacum HOM05D004241 ORTHO05D006031 6.4e-85 318.2 320 57.2
PSO384G4055 Papaver somniferum HOM05D004241 ORTHO05D006031 3.2e-84 315.8 339 52.5
arahy.Tifrunner.gnm1.ann1.YJ5G8U Arachis hypogaea HOM05D004241 ORTHO05D006031 5.4e-84 315.1 386 51.8
Pp3c13_13830 Physcomitrium patens HOM05D004241 ORTHO05D006031 5.4e-84 315.1 337 52.8
Cfa017182 Carpinus fangiana HOM05D004241 ORTHO05D006031 7.1e-84 314.7 163 93.9
Aqoxy4G02498 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 2.1e-83 313.2 344 53.5
arahy.Tifrunner.gnm1.ann1.IR2XKV Arachis hypogaea HOM05D004241 ORTHO05D006031 4.6e-83 312.0 214 80.8
AagrBONN_evm.TU.Sc2ySwM_228.1146 Anthoceros agrestis HOM05D004241 ORTHO05D006031 3.9e-82 308.9 377 49.3
SMO271G0089 Selaginella moellendorffii HOM05D004241 ORTHO05D006031 6.8e-79 298.1 338 51.2
FAN14G4537 Fragaria x ananassa HOM05D004241 ORTHO05D006031 3.2e-76 289.3 178 83.1
Cpa.g.sc11.77 Carica papaya HOM05D004241 ORTHO05D006031 5.4e-76 288.5 342 52.6
CDE04G2983 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 1.7e-74 283.5 413 44.6
vmacro08889 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 1.5e-73 280.4 244 62.3
Ah.12g058810 Amaranthus hybridus HOM05D004241 ORTHO05D006031 2.1e-72 276.6 287 54.7
MCO16G058 Micromonas commoda HOM05D004241 ORTHO05D006031 4.0e-71 272.3 194 69.6
Cre06.g294750 Chlamydomonas reinhardtii HOM05D004241 ORTHO05D006031 8.4e-69 264.6 208 63.5
arahy.Tifrunner.gnm1.ann1.XTCX6A Arachis hypogaea HOM05D004241 ORTHO05D006031 5.6e-65 251.9 160 85.6
SalBow5G3053 Salvia bowleyana HOM05D004241 ORTHO05D006031 1.6e-64 250.4 376 45.2
PRCOL_00003234 Prasinoderma coloniale HOM05D004241 ORTHO05D006031 1.2e-62 244.2 197 64.0
CBR_g38410 Chara braunii HOM05D004241 ORTHO05D006031 1.9e-52 210.3 214 56.1
arahy.Tifrunner.gnm1.ann1.X8HB46 Arachis hypogaea HOM05D004241 ORTHO05D026893 2.4e-47 193.4 107 88.8
Cfa017183 Carpinus fangiana HOM05D004241 ORTHO05D006031 1.4e-36 157.5 240 44.6
arahy.Tifrunner.gnm1.ann1.44A4XL Arachis hypogaea HOM05D004241 ORTHO05D026924 4.6e-35 152.5 150 59.3
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 9.7e-25 118.2 89 74.2
A09p02030 Brassica napus HOM05D004241 ORTHO05D018769 3.4e-22 109.8 143 46.2
C04p30330 Brassica napus HOM05D004241 ORTHO05D026893 5.9e-22 109.0 74 73.0
BolC4t24566H Brassica oleracea HOM05D004241 ORTHO05D026893 5.9e-22 109.0 74 73.0
BraA07t28631Z Brassica rapa HOM05D004241 ORTHO05D018769 2.9e-21 106.7 121 50.4
BraA02t07759Z Brassica rapa HOM05D004241 ORTHO05D018769 8.5e-21 105.1 121 50.4
C04p53880 Brassica napus HOM05D004241 ORTHO05D018769 3.0e-18 96.7 110 51.8
C09p54590 Brassica napus HOM05D004241 ORTHO05D018769 3.0e-18 96.7 110 51.8
BolC1t02697H Brassica oleracea HOM05D004241 ORTHO05D018769 3.0e-18 96.7 110 51.8
FAN09G0084 Fragaria x ananassa HOM05D004241 ORTHO05D006031 7.4e-17 92.0 61 77.0
A02p27320 Brassica napus HOM05D004241 ORTHO05D018769 5.3e-15 85.9 142 40.1
BolC8t51994H Brassica oleracea HOM05D002167 ORTHO05D016814 9.1e-15 85.1 100 47.0
C08p36750 Brassica napus HOM05D002167 ORTHO05D016814 1.6e-14 84.3 97 47.4
BcaC05g27019 Brassica carinata HOM05D002167 ORTHO05D016814 2.0e-14 84.0 100 46.0
BolC5t31601H Brassica oleracea HOM05D002167 ORTHO05D016814 2.0e-14 84.0 100 46.0
C05p28830 Brassica napus HOM05D002167 ORTHO05D016814 3.5e-14 83.2 97 46.4
C03p28370 Brassica napus HOM05D002167 ORTHO05D016814 5.9e-14 82.4 97 47.4
Zm00001eb286140 Zea mays HOM05D004241 ORTHO05D006031 4.2e-12 76.3 69 62.3
BcaC02g10323 Brassica carinata HOM05D004241 ORTHO05D026893 2.1e-11 73.9 42 88.1
HPP92_013874 Vanilla planifolia HOM05D004241 ORTHO05D006031 8.0e-11 72.0 75 53.3
Rhsim04G0126400 Rhododendron simsii HOM05D004241 ORTHO05D006031 1.0e-10 71.6 53 69.8
A09p61840 Brassica napus HOM05D004241 ORTHO05D018769 1.4e-10 71.2 121 39.7
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 3.0e-10 70.1 38 86.8
arahy.Tifrunner.gnm1.ann1.I63G1M Arachis hypogaea HOM05D004241 ORTHO05D006031 8.8e-10 68.6 39 89.7
FAN05G0935 Fragaria x ananassa HOM05D004241 ORTHO05D026924 1.1e-09 68.2 49 73.5
Actinidia20747 Actinidia chinensis HOM05D004241 ORTHO05D056132 2.6e-09 67.0 62 62.9
FAN14G2483 Fragaria x ananassa HOM05D004241 ORTHO05D026924 4.4e-09 66.2 49 71.4
arahy.Tifrunner.gnm1.ann1.ZW8CA6 Arachis hypogaea HOM05D004241 ORTHO05D006031 5.7e-09 65.9 39 84.6


User provided reference genes

Program Settings