Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 3.8e-54 214.5 106 100.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 4.7e-44 181.0 106 85.8
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.3e-41 172.9 106 81.1
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.3e-41 172.9 105 81.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.2e-41 172.2 106 78.3
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 4.9e-41 171.0 106 78.3
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 6.3e-41 170.6 106 80.2
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 8.3e-41 170.2 106 80.2
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.1e-40 169.9 106 77.4
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.1e-40 169.9 106 77.4
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 1.8e-40 169.1 107 79.4
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 1.8e-40 169.1 104 78.8
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.8e-40 169.1 106 79.2
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.8e-40 169.1 106 79.2
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.4e-40 168.7 106 80.2
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 2.4e-40 168.7 112 77.7
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.1e-40 168.3 106 78.3
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.1e-40 167.9 106 79.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 4.1e-40 167.9 105 78.1
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 9.2e-40 166.8 106 76.4
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 9.2e-40 166.8 106 75.5
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.5e-39 164.9 106 75.5
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 5.9e-39 164.1 110 75.5
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 5.9e-39 164.1 106 76.4
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 7.8e-39 163.7 106 77.4
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.0e-38 163.3 106 77.4
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.3e-38 162.9 104 76.9
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.3e-38 162.9 106 77.4
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 2.3e-38 162.2 106 74.5
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.9e-38 161.8 106 77.4
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 6.6e-38 160.6 104 75.0
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 6.6e-38 160.6 104 76.0
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 6.6e-38 160.6 104 76.0
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 8.6e-38 160.2 107 76.6
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 8.6e-38 160.2 107 73.8
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.1e-37 159.8 104 75.0
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.1e-37 159.8 104 76.0
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.1e-37 159.8 106 76.4
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.5e-37 159.5 106 74.5
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.5e-37 159.5 106 76.4
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.5e-37 158.7 112 71.4
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 2.5e-37 158.7 104 76.0
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 3.3e-37 158.3 113 72.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 3.3e-37 158.3 107 75.7
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.6e-37 157.5 107 76.6
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.2e-36 156.4 108 75.0
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 3.6e-36 154.8 105 71.4
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 6.1e-36 154.1 114 69.3
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 6.1e-36 154.1 114 68.4
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 6.1e-36 154.1 114 69.3
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 8.0e-36 153.7 105 70.5
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.0e-35 153.3 114 69.3
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.0e-35 153.3 105 71.4
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 1.4e-35 152.9 106 72.6
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 1.8e-35 152.5 108 71.3
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.3e-35 152.1 114 68.4
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 3.0e-35 151.8 114 68.4
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 3.0e-35 151.8 113 68.1
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 3.0e-35 151.8 107 73.8
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 4.0e-35 151.4 115 67.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 5.2e-35 151.0 76 90.8
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.2e-35 151.0 115 68.7
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 6.8e-35 150.6 112 68.8
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 6.8e-35 150.6 107 72.0
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.6e-34 148.7 108 71.3
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 3.4e-34 148.3 103 73.8
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 7.5e-34 147.1 106 67.9
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 9.8e-34 146.7 107 70.1
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.7e-33 146.0 121 65.3
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 2.2e-33 145.6 104 70.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.2e-33 145.6 102 66.7
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 2.9e-33 145.2 107 69.2
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 4.9e-33 144.4 113 65.5
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 4.9e-33 144.4 109 69.7
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 4.9e-33 144.4 107 67.3
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 6.4e-33 144.1 114 65.8
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.4e-33 144.1 107 68.2
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.4e-32 142.9 113 64.6
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.4e-32 142.9 113 64.6
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.4e-32 142.9 109 71.6
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.8e-32 142.5 98 70.4
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.8e-32 142.5 116 65.5
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 3.2e-32 141.7 113 64.6
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 3.2e-32 141.7 112 65.2
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 3.2e-32 141.7 112 65.2
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.2e-32 141.7 106 67.0
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 4.1e-32 141.4 108 64.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 5.4e-32 141.0 106 71.7
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 5.4e-32 141.0 106 69.8
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 7.0e-32 140.6 106 68.9
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 7.0e-32 140.6 108 69.4
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 7.0e-32 140.6 108 69.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.0e-31 139.0 98 69.4
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.7e-31 138.7 97 68.0
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.5e-31 138.3 104 68.3
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.7e-30 136.0 117 63.2
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.9e-29 132.5 66 90.9
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 7.3e-29 130.6 66 89.4
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.2e-28 129.8 69 100.0
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 3.6e-28 128.3 110 60.9
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.4e-27 126.3 64 89.1
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.8e-27 125.9 104 57.7
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 3.1e-27 125.2 62 90.3
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 1.5e-26 122.9 95 66.3
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.0e-26 122.5 95 64.2
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 2.0e-26 122.5 76 73.7
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.6e-26 122.1 65 86.2
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.9e-25 118.6 72 69.4
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 8.3e-25 117.1 84 66.7
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.1e-24 116.7 86 66.3
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.6e-23 112.8 62 82.3
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.0e-22 110.2 73 71.2
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.9e-22 108.2 82 70.7
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 5.8e-18 94.4 107 50.5
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.4e-16 89.7 67 73.1
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 1.0e-14 83.6 71 66.2
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 3.0e-14 82.0 74 56.8
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 8.9e-11 70.5 38 81.6
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.1e-08 63.5 35 74.3
MCO07G580 Micromonas commoda HOM05D006678 ORTHO05D008388 1.3e-06 56.6 80 40.0


User provided reference genes

Program Settings