Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.2e-192 674.5 329 100.0
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 8.8e-182 640.2 329 95.7
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.4e-155 553.1 329 80.9
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 9.1e-155 550.4 328 81.1
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.2e-154 550.1 329 80.2
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 3.5e-154 548.5 326 80.1
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 7.7e-154 547.4 326 82.2
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.3e-153 546.6 322 81.4
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.5e-152 541.2 322 80.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 9.5e-152 540.4 328 80.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 1.2e-151 540.0 322 80.4
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.2e-151 540.0 322 80.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.0e-150 537.0 322 80.1
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.5e-149 533.1 320 80.9
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 1.4e-147 526.6 325 78.8
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.4e-147 525.8 331 79.5
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 3.1e-147 525.4 328 77.4
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 4.1e-147 525.0 328 76.5
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 7.0e-147 524.2 328 77.4
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.6e-146 523.1 324 79.0
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 2.0e-146 522.7 328 77.7
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.5e-146 521.9 328 77.7
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 5.9e-146 521.2 326 78.5
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.3e-145 520.0 328 76.5
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-145 520.0 328 76.5
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 2.9e-145 518.8 328 78.0
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.1e-144 516.9 328 76.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.5e-144 516.5 328 75.9
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.5e-144 515.8 331 76.1
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.5e-144 515.8 333 76.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 5.6e-144 514.6 328 75.9
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 9.5e-144 513.8 331 76.7
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.8e-143 512.3 335 76.1
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 2.8e-143 512.3 335 76.1
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 6.1e-143 511.1 336 75.9
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 6.1e-143 511.1 302 80.8
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 8.0e-143 510.8 335 75.5
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 8.0e-143 510.8 294 83.0
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 5.2e-142 508.1 331 75.2
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 6.8e-142 507.7 328 75.9
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.6e-141 505.8 294 82.7
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.4e-141 505.4 327 76.8
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 3.4e-141 505.4 331 75.8
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 4.4e-141 505.0 337 74.8
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 2.9e-140 502.3 336 74.7
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 6.4e-140 501.1 339 74.6
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 8.3e-140 500.7 332 75.9
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.1e-139 500.4 322 77.3
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.1e-139 500.4 328 75.3
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.1e-139 500.4 327 74.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.4e-139 500.0 331 74.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 2.4e-139 499.2 332 75.3
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 2.4e-139 499.2 332 75.3
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.2e-139 498.8 337 73.9
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 7.0e-139 497.7 337 73.9
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.6e-138 496.5 336 73.5
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.7e-138 495.7 337 73.6
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.7e-138 495.7 337 73.6
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.3e-137 493.4 338 73.4
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.3e-137 493.4 338 73.4
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.9e-137 491.9 328 73.5
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 5.0e-137 491.5 328 74.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 5.6e-136 488.0 326 74.2
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 5.6e-136 488.0 333 74.5
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 9.5e-136 487.3 336 73.5
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.1e-135 486.1 298 80.2
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.1e-127 459.5 324 72.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 8.1e-127 457.6 399 61.9
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 1.1e-126 457.2 422 59.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 2.3e-126 456.1 295 77.3
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.2e-126 454.9 326 72.4
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 8.9e-126 454.1 330 69.4
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.7e-124 449.9 323 71.5
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.3e-121 439.5 325 67.1
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 5.1e-121 438.3 269 78.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 5.6e-120 434.9 348 66.1
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.2e-119 433.7 281 76.9
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.8e-118 429.9 336 66.1
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.5e-117 426.8 271 76.8
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 3.4e-117 425.6 280 73.6
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 4.4e-117 425.2 317 67.5
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 6.4e-116 421.4 273 75.1
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.5e-114 415.6 260 77.3
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 7.8e-114 414.5 292 70.5
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 5.6e-112 408.3 262 72.9
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 2.2e-108 396.4 321 62.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.8e-108 395.6 328 62.8
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.4e-108 394.8 309 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.6e-106 390.2 318 60.7
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 1.9e-104 383.3 323 61.3
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.8e-103 379.4 315 59.7
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 6.2e-103 378.3 254 72.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.5e-101 373.6 641 39.0
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.2e-98 364.0 315 57.5
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.8e-95 352.8 291 59.1
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 9.0e-94 347.8 296 63.2
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 3.8e-92 342.4 330 58.8
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.9e-91 340.1 274 61.7
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.4e-86 323.9 218 74.3
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.8e-86 323.6 322 54.7
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.9e-86 321.6 332 55.4
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 7.9e-82 308.1 240 67.9
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 2.1e-74 283.5 201 72.1
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 3.3e-72 276.2 198 64.1
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.4e-70 270.8 222 61.7
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.6e-69 266.5 164 79.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 1.4e-67 260.8 225 58.7
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-66 257.7 201 67.7
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.1e-62 244.6 330 46.1
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-60 237.3 253 53.4
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.8e-57 227.3 155 69.7
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.2e-51 206.1 131 76.3
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 2.7e-50 203.4 185 55.7
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 3.6e-50 203.0 155 66.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 3.5e-45 186.4 101 84.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 8.3e-39 165.2 90 84.4
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 2.4e-30 137.1 279 33.7
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.3e-28 131.3 291 30.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.7e-28 131.0 102 62.7
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.0e-25 121.7 80 72.5
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.8e-17 94.4 158 39.9
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 8.3e-15 85.5 336 25.0
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 6.6e-12 75.9 54 75.9
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 1.4e-09 68.2 48 64.6
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.3e-09 67.4 53 60.4
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.1e-09 67.0 55 63.6
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 5.4e-06 56.2 70 44.3


User provided reference genes

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