Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 2.9e-76 288.5 146 100.0
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.1e-40 170.2 152 62.5
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 6.9e-38 161.0 154 61.7
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.7e-36 156.4 150 57.3
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 5.0e-36 154.8 153 57.5
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.4e-35 153.3 122 63.1
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 3.7e-31 138.7 154 52.6
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.8e-30 136.3 162 54.9
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 5.3e-30 134.8 150 55.3
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 4.5e-29 131.7 137 56.2
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.2e-28 129.4 157 51.6
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 4.7e-26 121.7 134 54.5
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 2.3e-25 119.4 149 47.0
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 8.8e-25 117.5 149 47.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 2.0e-24 116.3 149 47.7
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 3.3e-24 115.5 132 52.3
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 8.2e-23 110.9 115 53.9
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 1.1e-22 110.5 158 48.1
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.4e-22 110.2 125 48.8
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 4.1e-22 108.6 155 43.9
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.5e-21 106.7 130 49.2
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 3.4e-21 105.5 159 44.7
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 7.7e-21 104.4 130 46.9
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.3e-20 103.6 156 44.2
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.7e-20 103.2 148 45.3
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.7e-20 103.2 118 49.2
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.8e-20 102.1 155 42.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.8e-20 102.1 118 49.2
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 5.0e-20 101.7 141 45.4
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.2e-19 99.0 114 48.2
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 7.2e-19 97.8 88 61.4
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.2e-18 97.1 140 43.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.6e-18 96.7 144 40.3
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.1e-18 96.3 90 54.4
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.7e-18 95.9 108 50.0
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 3.6e-18 95.5 152 43.4
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 6.1e-18 94.7 123 42.3
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 6.1e-18 94.7 146 42.5
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 8.0e-18 94.4 89 51.7
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.8e-17 93.2 101 47.5
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 5.2e-17 91.7 100 49.0
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 8.8e-17 90.9 115 45.2
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.1e-16 90.5 147 38.8
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.5e-16 90.1 95 51.6
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 4.4e-16 88.6 87 50.6
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 1.3e-15 87.0 110 43.6
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 1.7e-15 86.7 94 44.7
VMungo1309G0126 Vigna mungo HOM05D007643 ORTHO05D007801 1.7e-15 86.7 87 52.9
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.2e-15 86.3 138 39.1
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.3e-15 84.7 114 42.1
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.4e-14 83.6 138 38.4
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.4e-14 83.6 126 39.7
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.4e-14 82.8 137 38.0
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 5.3e-14 81.6 108 39.8
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 7.0e-14 81.3 108 39.8
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 9.1e-14 80.9 77 50.6
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 3.5e-13 79.0 91 45.1
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 4.5e-13 78.6 96 43.8
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 7.7e-13 77.8 102 42.2
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.3e-12 77.0 135 40.7
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 1.3e-12 77.0 76 48.7
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 3.8e-12 75.5 87 43.7
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.1e-11 73.9 129 38.8
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.5e-11 73.6 85 43.5
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.5e-11 72.8 112 43.8
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 4.2e-11 72.0 93 41.9
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 4.2e-11 72.0 90 43.3
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 7.2e-11 71.2 76 43.4
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 9.4e-11 70.9 126 35.7
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.2e-10 70.5 97 42.3
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.6e-10 70.1 129 38.0
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 2.1e-10 69.7 95 40.0
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 2.7e-10 69.3 110 34.5
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 2.7e-10 69.3 117 33.3
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.7e-10 68.6 73 46.6
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.0e-10 67.8 85 44.7
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 1.0e-09 67.4 123 35.0
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.0e-09 67.4 131 35.9
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.8e-09 66.6 113 37.2
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 2.3e-09 66.2 156 30.1
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.0e-09 65.5 47 68.1
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 1.5e-08 63.5 65 47.7
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 2.6e-08 62.8 136 32.4
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 2.6e-08 62.8 136 32.4
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 2.6e-08 62.8 136 32.4
VMungo1309G2394 Vigna mungo HOM05D007643 ORTHO05D007801 3.3e-08 62.4 61 55.7
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 9.7e-08 60.8 152 30.3
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 1.7e-07 60.1 73 43.8
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 2.8e-07 59.3 64 51.6
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.7e-07 58.9 76 38.2
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 4.8e-07 58.5 70 40.0
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 1.8e-06 56.6 115 32.2
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.8e-06 56.6 75 36.0
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 1.8e-06 56.6 89 40.4
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 1.8e-06 56.6 143 32.9
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 7.0e-06 54.7 119 31.1


User provided reference genes

Program Settings