Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 3.7e-163 578.2 297 100.0
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.6e-156 555.4 295 96.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 3.0e-133 478.8 294 79.9
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 1.9e-130 469.5 293 79.2
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 7.8e-129 464.2 295 79.3
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.3e-128 462.6 293 78.8
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 5.6e-127 458.0 291 78.4
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.6e-126 456.4 293 77.8
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.6e-126 456.4 293 77.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 4.0e-125 451.8 296 77.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.4e-124 448.7 295 76.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 5.4e-122 441.4 294 75.5
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.6e-121 439.9 294 74.1
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 4.6e-121 438.3 293 75.8
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.6e-120 434.5 294 75.2
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.3e-119 432.2 294 73.5
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 7.3e-119 431.0 293 72.7
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 4.7e-118 428.3 294 74.8
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.1e-117 427.2 291 73.2
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 2.3e-117 426.0 295 71.9
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.2e-116 423.7 294 72.1
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.6e-116 422.5 294 72.4
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 4.4e-116 421.8 293 71.3
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 4.4e-116 421.8 293 71.3
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.3e-115 420.2 294 71.4
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.3e-115 420.2 292 70.5
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.9e-115 419.1 293 72.7
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.1e-114 417.2 294 70.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.1e-114 417.2 294 71.1
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.4e-114 416.8 304 69.7
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 3.2e-114 415.6 292 69.9
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.2e-113 413.7 294 70.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.2e-113 413.7 293 70.0
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 2.1e-113 412.9 276 74.3
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 2.1e-113 412.9 290 71.7
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.5e-113 412.1 304 69.4
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 3.5e-113 412.1 305 68.5
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 4.6e-113 411.8 300 69.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 6.0e-113 411.4 293 71.3
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.3e-112 410.2 308 67.5
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.3e-112 409.5 294 69.7
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.5e-111 406.8 295 72.5
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.9e-111 406.4 277 72.6
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.3e-111 405.6 294 72.4
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 4.3e-111 405.2 316 66.5
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 4.3e-111 405.2 277 72.9
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 7.3e-111 404.4 308 67.2
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 9.5e-111 404.1 293 68.9
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.6e-110 403.3 293 71.7
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.6e-110 403.3 279 71.3
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.1e-110 402.9 295 66.1
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 4.7e-110 401.7 302 66.2
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 8.1e-110 401.0 295 69.2
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.4e-109 400.2 294 68.4
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.8e-109 399.8 293 68.9
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.8e-109 399.8 294 68.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.4e-109 399.4 297 67.3
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.4e-109 399.4 295 70.8
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 3.1e-109 399.1 292 71.6
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 6.8e-109 397.9 286 69.2
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.9e-109 397.5 294 68.7
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 8.9e-109 397.5 294 70.7
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.2e-108 397.1 294 68.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.5e-108 396.7 293 71.0
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.5e-108 396.7 300 65.3
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 4.4e-108 395.2 292 69.2
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 5.8e-108 394.8 308 65.6
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.3e-107 393.7 301 66.8
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.3e-107 393.7 293 67.2
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.7e-107 393.3 296 66.6
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.2e-107 392.9 370 56.8
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.9e-107 392.5 295 69.5
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 3.8e-107 392.1 293 66.6
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 3.8e-107 392.1 299 66.2
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.9e-106 389.8 291 67.7
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.2e-106 389.0 284 68.3
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 4.2e-106 388.7 296 69.6
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 4.2e-106 388.7 280 70.4
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 9.2e-106 387.5 295 68.1
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 1.6e-105 386.7 296 69.3
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.6e-105 386.7 293 65.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 2.7e-105 386.0 295 66.1
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.7e-105 386.0 293 67.2
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.0e-105 384.8 295 69.2
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.0e-105 384.8 295 69.2
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.3e-104 383.6 310 62.9
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.7e-104 383.3 293 65.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 3.3e-103 379.0 279 70.6
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 4.7e-102 375.2 279 70.6
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 8.1e-102 374.4 301 62.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.7e-99 366.7 294 64.6
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.4e-98 362.8 281 65.1
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 1.6e-97 360.1 292 65.4
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 4.6e-97 358.6 273 68.5
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 7.8e-97 357.8 284 64.1
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 7.8e-97 357.8 446 46.9
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.0e-96 357.5 298 63.1
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.2e-92 344.0 295 64.1
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.3e-91 340.5 256 66.8
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 3.2e-90 335.9 285 63.5
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.1e-89 333.2 255 68.2
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 6.0e-89 331.6 292 62.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.9e-88 328.9 277 61.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.3e-87 325.9 277 60.6
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.3e-86 323.9 258 65.5
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.9e-82 310.1 204 76.0
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.1e-80 302.0 211 72.5
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.8e-78 296.2 204 71.1
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 6.2e-78 295.0 284 53.2
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 7.6e-76 288.1 293 53.6
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.0e-75 287.7 264 57.2
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.8e-75 285.8 293 53.6
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 3.8e-75 285.8 275 57.5
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 2.7e-73 279.6 286 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.6e-73 278.9 274 53.3
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 9.7e-71 271.2 271 52.4
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 1.9e-66 256.9 278 49.6
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.2e-65 254.2 272 51.1
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.3e-64 250.0 165 72.1
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 4.3e-63 245.7 254 57.9
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.5e-60 237.3 269 47.2
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.0e-60 236.9 165 70.3
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 9.4e-58 228.0 165 68.5
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.8e-56 223.8 272 45.6
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 5.1e-56 222.2 273 45.8
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 2.6e-55 219.9 167 71.3
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.5e-52 210.7 266 50.8
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.1e-49 200.3 217 53.9
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.7e-38 164.1 117 70.1
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.2e-34 149.4 139 56.1
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.3e-32 143.7 133 54.9
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.5e-18 97.8 128 46.9
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.1e-17 92.4 96 47.9
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 3.1e-16 90.1 241 34.0
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 8.0e-09 65.5 178 32.6
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 4.9e-06 56.2 59 44.1


User provided reference genes

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