Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z3AS8D Arachis hypogaea HOM05D005451 ORTHO05D006647 9.7e-49 196.4 95 100.0
arahy.Tifrunner.gnm1.ann1.4RQ7RI Arachis hypogaea HOM05D005451 ORTHO05D006647 1.3e-48 196.1 94 100.0
arahy.Tifrunner.gnm1.ann1.N3Z787 Arachis hypogaea HOM05D005451 ORTHO05D006647 4.1e-47 191.0 94 96.8
arahy.Tifrunner.gnm1.ann1.W9B6QC Arachis hypogaea HOM05D005451 ORTHO05D006647 4.1e-47 191.0 94 96.8
arahy.Tifrunner.gnm1.ann1.WMHD1H Arachis hypogaea HOM05D005451 ORTHO05D006647 4.1e-47 191.0 94 96.8
arahy.Tifrunner.gnm1.ann1.XN7WR1 Arachis hypogaea HOM05D005451 ORTHO05D006647 4.1e-47 191.0 94 96.8
arahy.Tifrunner.gnm1.ann1.EAT06N Arachis hypogaea HOM05D005451 ORTHO05D006647 9.1e-47 189.9 94 95.7
arahy.Tifrunner.gnm1.ann1.BM4P4F Arachis hypogaea HOM05D005451 ORTHO05D006647 3.4e-46 188.0 95 95.8
Psat3g042120 Pisum sativum HOM05D005451 ORTHO05D006647 2.2e-29 132.1 78 76.9
Atru.chr8.1787 Acer truncatum HOM05D005451 ORTHO05D006647 6.5e-29 130.6 78 75.6
Phvul.001G179600 Phaseolus vulgaris HOM05D005451 ORTHO05D006647 1.9e-28 129.0 94 63.8
Ca_08909_v3 Cicer arietinum L. HOM05D005451 ORTHO05D006647 2.5e-28 128.6 78 75.6
Gohir.A09G145800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 3.2e-28 128.3 78 73.1
Lj1g0026290 Lotus japonicus HOM05D005451 ORTHO05D006647 3.2e-28 128.3 79 73.4
MELO3C024468.2 Cucumis melo HOM05D005451 ORTHO05D006647 4.2e-28 127.9 78 71.8
CsaV3_6G039920 Cucumis sativus L. HOM05D005451 ORTHO05D006647 4.2e-28 127.9 78 71.8
ClCG04G009330 Citrullus lanatus HOM05D005451 ORTHO05D006647 9.4e-28 126.7 78 70.5
Sed0015565 Sechium edule HOM05D005451 ORTHO05D006647 1.2e-27 126.3 78 71.8
TAR369G0910 Trochodendron aralioides HOM05D005451 ORTHO05D006647 1.6e-27 125.9 98 65.3
VMungo1383G1956 Vigna mungo HOM05D005451 ORTHO05D006647 1.6e-27 125.9 78 71.8
Haze_20523 Corylus avellana HOM05D005451 ORTHO05D006647 2.1e-27 125.6 78 73.1
RcHm_v2.0_Chr3g0470431 Rosa chinensis HOM05D005451 ORTHO05D006647 2.1e-27 125.6 78 73.1
Cfa017630 Carpinus fangiana HOM05D005451 ORTHO05D006647 3.6e-27 124.8 78 73.1
PSO063G2125 Papaver somniferum HOM05D005451 ORTHO05D006647 3.6e-27 124.8 78 70.5
FAN02G0799 Fragaria x ananassa HOM05D005451 ORTHO05D006647 6.1e-27 124.0 86 68.6
CANSAT80G0106 Cannabis sativa HOM05D005451 ORTHO05D006647 1.0e-26 123.2 78 71.8
Gohir.A04G071800 Gossypium hirsutum HOM05D005451 ORTHO05D006647 1.0e-26 123.2 91 64.8
Gohir.D04G110300 Gossypium hirsutum HOM05D005451 ORTHO05D006647 1.0e-26 123.2 91 64.8
Gorai.009G414400 Gossypium raimondii HOM05D005451 ORTHO05D006647 1.0e-26 123.2 91 64.8
THA.LOC104805223 Tarenaya hassleriana HOM05D005451 ORTHO05D006647 1.0e-26 123.2 73 76.7
QL07p043063 Quercus lobata HOM05D005451 ORTHO05D006647 1.4e-26 122.9 104 59.6
Thecc.05G068800 Theobroma cacao HOM05D005451 ORTHO05D006647 1.8e-26 122.5 78 70.5
PSO339G4566 Papaver somniferum HOM05D005451 ORTHO05D006647 2.3e-26 122.1 78 69.2
Potri.006G123100 Populus trichocarpa HOM05D005451 ORTHO05D006647 2.3e-26 122.1 78 71.8
CSS0014192 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 3.0e-26 121.7 78 69.2
CSS0019333 Camellia sinensis var. sinensis HOM05D005451 ORTHO05D006647 3.0e-26 121.7 78 69.2
Dinv35793 Davidia involucrata HOM05D005451 ORTHO05D006647 3.0e-26 121.7 78 69.2
TPR.G32842 Trifolium pratense HOM05D005451 ORTHO05D006647 3.0e-26 121.7 78 70.5
FAN14G0704 Fragaria x ananassa HOM05D005451 ORTHO05D006647 5.2e-26 120.9 86 66.3
Medtr7g102130 Medicago truncatula HOM05D005451 ORTHO05D006647 6.7e-26 120.6 94 61.7
FvH4_6g16520 Fragaria vesca HOM05D005451 ORTHO05D006647 8.8e-26 120.2 86 65.1
Manes.08G011600 Manihot esculenta HOM05D005451 ORTHO05D006647 8.8e-26 120.2 78 70.5
FAN05G1419 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.2e-25 119.8 86 66.3
MD12G1109800 Malus domestica HOM05D005451 ORTHO05D006647 1.5e-25 119.4 91 63.7
CiPaw.09G171400 Carya illinoinensis HOM05D005451 ORTHO05D006647 2.0e-25 119.0 92 64.1
Prupe.7G128400 Prunus persica HOM05D005451 ORTHO05D006647 2.0e-25 119.0 78 67.9
EL10Ac3g07190 Beta vulgaris HOM05D005451 ORTHO05D006647 3.3e-25 118.2 72 73.6
Nn6g35270 Nelumbo nucifera HOM05D005451 ORTHO05D006647 3.3e-25 118.2 78 69.2
GSVIVG01033652001 Vitis vinifera HOM05D005451 ORTHO05D006647 3.3e-25 118.2 78 65.4
COL.COLO4_26945 Corchorus olitorius HOM05D005451 ORTHO05D006647 5.7e-25 117.5 90 64.4
Actinidia28910 Actinidia chinensis HOM05D005451 ORTHO05D006647 7.5e-25 117.1 74 70.3
Duzib106G1340 Durio zibethinus HOM05D005451 ORTHO05D006647 9.7e-25 116.7 78 67.9
FAN09G1715 Fragaria x ananassa HOM05D005451 ORTHO05D006647 9.7e-25 116.7 86 64.0
Lsat_1_v5_gn_1_51620 Lactuca sativa HOM05D005451 ORTHO05D006647 9.7e-25 116.7 73 69.9
Duzib128G0902 Durio zibethinus HOM05D005451 ORTHO05D006647 1.3e-24 116.3 78 69.2
FAN15G0973 Fragaria x ananassa HOM05D005451 ORTHO05D006647 1.7e-24 115.9 86 64.0
PGR004G0040 Punica granatum HOM05D005451 ORTHO05D006647 1.7e-24 115.9 78 66.7
Rhsim03G0090700 Rhododendron simsii HOM05D005451 ORTHO05D006647 1.7e-24 115.9 78 66.7
TAR623G1526 Trochodendron aralioides HOM05D005451 ORTHO05D006647 1.7e-24 115.9 78 67.9
Eucgr.A01667 Eucalyptus grandis HOM05D005451 ORTHO05D006647 3.7e-24 114.8 93 58.1
Hma1.2p1_0828F.1_g225120 Hydrangea macrophylla HOM05D005451 ORTHO05D006647 3.7e-24 114.8 78 66.7
Lalb_Chr20g0112581 Lupinus albus HOM05D005451 ORTHO05D006647 3.7e-24 114.8 92 62.0
AUR62040850 Chenopodium quinoa HOM05D005451 ORTHO05D006647 4.8e-24 114.4 72 70.8
Migut.L01710 Erythranthe guttata HOM05D005451 ORTHO05D006647 4.8e-24 114.4 97 58.8
Ciclev10017163m.g Citrus clementina HOM05D005451 ORTHO05D006647 6.3e-24 114.0 73 69.9
Hund19112 Selenicereus undatus HOM05D005451 ORTHO05D006647 6.3e-24 114.0 73 65.8
HPP92_027104 Vanilla planifolia HOM05D005451 ORTHO05D006647 6.3e-24 114.0 81 63.0
TWI53G1613 Tripterygium wilfordii HOM05D005451 ORTHO05D006647 1.1e-23 113.2 78 64.1
Aa31LG10G8270 Aethionema arabicum HOM05D005451 ORTHO05D006647 1.4e-23 112.8 81 64.2
HPP92_021403 Vanilla planifolia HOM05D005451 ORTHO05D006647 1.4e-23 112.8 82 63.4
Sabra06G0097400 Salix brachista HOM05D005451 ORTHO05D006647 2.4e-23 112.1 95 58.9
Actinidia26660 Actinidia chinensis HOM05D005451 ORTHO05D006647 3.1e-23 111.7 79 65.8
AUR62030367 Chenopodium quinoa HOM05D005451 ORTHO05D006647 4.1e-23 111.3 72 68.1
Sc02g0001580 Simmondsia chinensis HOM05D005451 ORTHO05D006647 4.1e-23 111.3 73 67.1
Thhalv10017445m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 1.2e-22 109.8 72 68.1
HanXRQChr11g0350471 Helianthus annuus HOM05D005451 ORTHO05D006647 1.2e-22 109.8 74 64.9
ECA248G2056 Erigeron canadensis HOM05D005451 ORTHO05D006647 1.6e-22 109.4 66 72.7
Lsat_1_v5_gn_2_107281 Lactuca sativa HOM05D005451 ORTHO05D006647 1.6e-22 109.4 71 64.8
SGA_v2.0_scaffold84G26539 Striga asiatica HOM05D005451 ORTHO05D006647 1.6e-22 109.4 71 70.4
CDE09G0643 Ceratophyllum demersum HOM05D005451 ORTHO05D006647 2.7e-22 108.6 78 60.3
SGA_v2.0_scaffold90G27758 Striga asiatica HOM05D005451 ORTHO05D006647 2.7e-22 108.6 71 69.0
arahy.Tifrunner.gnm1.ann1.DJQ5D0 Arachis hypogaea HOM05D005451 ORTHO05D006647 3.5e-22 108.2 66 84.8
Peaxi162Scf00722g00002 Petunia axillaris HOM05D005451 ORTHO05D006647 4.5e-22 107.8 78 61.5
Sopen09g003110 Solanum pennellii HOM05D005451 ORTHO05D006647 4.5e-22 107.8 78 61.5
Cc06_g04340 Coffea canephora HOM05D005451 ORTHO05D006647 5.9e-22 107.5 73 64.4
Solyc09g008290.4 Solanum lycopersicum HOM05D005451 ORTHO05D006647 5.9e-22 107.5 78 60.3
MSTRG.26689 Avicennia marina HOM05D005451 ORTHO05D006647 7.7e-22 107.1 71 69.0
C06p21050 Brassica napus HOM05D005451 ORTHO05D006647 7.7e-22 107.1 71 67.6
BolC6t37290H Brassica oleracea HOM05D005451 ORTHO05D006647 7.7e-22 107.1 71 67.6
SalBow6G0361 Salvia bowleyana HOM05D005451 ORTHO05D006647 7.7e-22 107.1 84 61.9
Aa31LG10G8380 Aethionema arabicum HOM05D005451 ORTHO05D006647 1.0e-21 106.7 82 62.2
Hund24635 Selenicereus undatus HOM05D005451 ORTHO05D006647 1.0e-21 106.7 73 61.6
PGSC0003DMG400003891 Solanum tuberosum HOM05D005451 ORTHO05D006647 1.7e-21 105.9 78 61.5
A07p21440 Brassica napus HOM05D005451 ORTHO05D006647 2.2e-21 105.5 71 67.6
BraA07t29831Z Brassica rapa HOM05D005451 ORTHO05D006647 2.2e-21 105.5 71 67.6
Os04g0560200 Oryza sativa ssp. japonica HOM05D005451 ORTHO05D006647 2.2e-21 105.5 78 59.0
Nitab4.5_0008624g0010 Nicotiana tabacum HOM05D005451 ORTHO05D006647 5.0e-21 104.4 71 64.8
BcaB02g07801 Brassica carinata HOM05D005451 ORTHO05D006647 6.5e-21 104.0 71 66.2
Thhalv10010819m.g Eutrema salsugineum HOM05D005451 ORTHO05D006647 6.5e-21 104.0 73 64.4
Sp5g09120 Schrenkiella parvula HOM05D005451 ORTHO05D006647 8.5e-21 103.6 71 64.8
unitig_899.g15217 Utricularia gibba HOM05D000548 ORTHO05D000987 8.5e-21 103.6 68 66.2
AT3G53220 Arabidopsis thaliana HOM05D005451 ORTHO05D006647 1.1e-20 103.2 73 64.4
AL5G34100 Arabidopsis lyrata HOM05D005451 ORTHO05D006647 1.5e-20 102.8 73 64.4
CARHR163080 Cardamine hirsuta HOM05D005451 ORTHO05D006647 1.5e-20 102.8 73 64.4
Zm00001eb074150 Zea mays HOM05D005451 ORTHO05D006647 1.5e-20 102.8 81 56.8
CAN.G900.23 Capsicum annuum HOM05D005451 ORTHO05D006647 4.2e-20 101.3 68 66.2
ATR0776G022 Amborella trichopoda HOM05D005451 ORTHO05D006647 5.5e-20 100.9 78 57.7
Nitab4.5_0000578g0070 Nicotiana tabacum HOM05D005451 ORTHO05D006647 1.6e-19 99.4 79 58.2
Carub.0005s1975 Capsella rubella HOM05D005451 ORTHO05D006647 2.1e-19 99.0 73 64.4
BcaC02g09179 Brassica carinata HOM05D005451 ORTHO05D006647 1.0e-18 96.7 71 60.6
BolC4t25546H Brassica oleracea HOM05D005451 ORTHO05D006647 1.0e-18 96.7 71 60.6
BcaB02g08532 Brassica carinata HOM05D005451 ORTHO05D006647 1.8e-18 95.9 81 54.3
Glyma.19G184600 Glycine max HOM05D005451 ORTHO05D006647 1.8e-18 95.9 116 44.8
arahy.Tifrunner.gnm1.ann1.H635BA Arachis hypogaea HOM05D005451 ORTHO05D006647 2.3e-18 95.5 57 84.2
BcaC02g09178 Brassica carinata HOM05D005451 ORTHO05D006647 4.0e-18 94.7 69 60.9
BraA04t16327Z Brassica rapa HOM05D005451 ORTHO05D006647 8.8e-18 93.6 71 59.2
AagrBONN_evm.TU.Sc2ySwM_368.2032 Anthoceros agrestis HOM05D005451 ORTHO05D006647 2.0e-17 92.4 78 51.3
Glyma.03G184100 Glycine max HOM05D005451 ORTHO05D006647 1.8e-15 85.9 47 76.6
Mapoly0103s0022 Marchantia polymorpha HOM05D005451 ORTHO05D006647 1.8e-15 85.9 78 43.6
Dinv37322 Davidia involucrata HOM05D005451 ORTHO05D006647 2.0e-14 82.4 80 51.2
Pp3c9_9220 Physcomitrium patens HOM05D005451 ORTHO05D006647 2.0e-14 82.4 84 41.7
SMO203G0200 Selaginella moellendorffii HOM05D005451 ORTHO05D006647 5.9e-14 80.9 80 40.0
TPR.G10764 Trifolium pratense HOM05D005451 ORTHO05D006647 1.5e-12 76.3 38 84.2
FAN05G2954 Fragaria x ananassa HOM05D005451 ORTHO05D006647 3.2e-12 75.1 38 84.2
vmacro07300 Vaccinium macrocarpon HOM05D005451 ORTHO05D006647 4.2e-12 74.7 38 84.2
Aqoxy1G01137 Aquilegia oxysepala HOM05D005451 ORTHO05D006647 5.5e-12 74.3 61 54.1
C04p39740 Brassica napus HOM05D005451 ORTHO05D006647 5.5e-12 74.3 76 50.0
Gorai.006G162600 Gossypium raimondii HOM05D005451 ORTHO05D006647 3.6e-11 71.6 46 69.6
CBR_g19638 Chara braunii HOM05D005451 ORTHO05D006647 4.7e-11 71.2 73 38.4
TPR.G40470 Trifolium pratense HOM05D005451 ORTHO05D006647 4.7e-11 71.2 36 83.3
A04p06230 Brassica napus HOM05D005451 ORTHO05D006647 6.1e-11 70.9 76 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1669 Anthoceros agrestis HOM05D005451 ORTHO05D006647 4.4e-09 64.7 58 46.6
MD04G1091800 Malus domestica HOM05D005451 ORTHO05D006647 8.3e-08 60.5 78 39.7
AagrBONN_evm.TU.Sc2ySwM_368.2036 Anthoceros agrestis HOM05D005451 ORTHO05D006647 4.1e-07 58.2 75 38.7
AagrBONN_evm.TU.Sc2ySwM_368.2054 Anthoceros agrestis HOM05D005451 ORTHO05D006647 5.4e-07 57.8 59 45.8


User provided reference genes

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