Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 7.1e-62 240.4 116 100.0
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 7.4e-51 203.8 115 88.7
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 2.2e-47 192.2 111 87.4
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 6.7e-44 180.6 102 89.2
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-40 169.1 105 85.7
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 8.2e-34 147.1 103 70.9
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 5.3e-33 144.4 103 68.0
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 3.5e-32 141.7 89 82.0
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 4.5e-32 141.4 99 76.8
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.3e-31 139.8 102 69.6
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 1.3e-31 139.8 106 61.3
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 3.8e-31 138.3 101 64.4
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 1.5e-30 136.3 103 68.9
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.5e-30 136.3 103 67.0
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 1.9e-30 136.0 103 68.0
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 2.5e-30 135.6 102 61.8
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 2.5e-30 135.6 106 60.4
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 4.2e-30 134.8 103 68.9
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 5.5e-30 134.4 102 68.6
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 7.2e-30 134.0 102 62.7
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 9.4e-30 133.7 103 63.1
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 9.4e-30 133.7 102 62.7
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 1.6e-29 132.9 102 62.7
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.6e-29 132.9 102 62.7
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 1.6e-29 132.9 102 63.7
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 2.1e-29 132.5 102 63.7
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 2.1e-29 132.5 102 62.7
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 2.7e-29 132.1 102 59.8
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 3.6e-29 131.7 103 66.0
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 4.7e-29 131.3 102 63.7
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 4.7e-29 131.3 101 64.4
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 4.7e-29 131.3 101 60.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 8.0e-29 130.6 107 58.9
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.4e-28 129.8 102 61.8
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 1.8e-28 129.4 102 59.8
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 2.3e-28 129.0 102 64.7
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 2.3e-28 129.0 103 61.2
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 2.3e-28 129.0 102 61.8
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 8.8e-28 127.1 102 63.7
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.1e-27 126.7 102 62.7
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.1e-27 126.7 102 59.8
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.1e-27 126.7 102 59.8
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 1.5e-27 126.3 102 60.8
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 2.6e-27 125.6 103 59.2
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 2.6e-27 125.6 103 55.3
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 5.7e-27 124.4 103 55.3
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 5.7e-27 124.4 102 58.8
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 7.4e-27 124.0 103 54.4
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 7.4e-27 124.0 103 54.4
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 7.4e-27 124.0 103 59.2
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 9.7e-27 123.6 102 55.9
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 9.7e-27 123.6 101 63.4
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 1.3e-26 123.2 103 57.3
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.7e-26 122.9 103 54.4
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.7e-26 122.9 105 55.2
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 2.2e-26 122.5 79 78.5
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.2e-26 122.5 102 56.9
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 2.8e-26 122.1 79 78.5
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 3.7e-26 121.7 103 59.2
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 4.8e-26 121.3 102 58.8
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 4.8e-26 121.3 103 56.3
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 6.3e-26 120.9 102 57.8
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 6.3e-26 120.9 103 56.3
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 8.2e-26 120.6 102 54.9
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 1.1e-25 120.2 102 61.8
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 1.1e-25 120.2 102 61.8
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.1e-25 120.2 102 60.8
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.1e-25 120.2 109 53.2
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.4e-25 119.8 103 53.4
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.4e-25 119.8 102 54.9
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.4e-25 119.8 103 56.3
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.8e-25 119.4 102 54.9
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 1.8e-25 119.4 103 58.3
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 3.1e-25 118.6 103 56.3
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 4.1e-25 118.2 104 54.8
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 4.1e-25 118.2 103 55.3
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 5.3e-25 117.9 74 81.1
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 7.0e-25 117.5 108 53.7
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 7.0e-25 117.5 103 56.3
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 9.1e-25 117.1 102 54.9
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.2e-24 116.7 103 57.3
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 3.5e-24 115.2 108 62.0
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 4.5e-24 114.8 105 56.2
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 4.5e-24 114.8 102 55.9
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.3e-23 113.2 121 50.4
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 1.7e-23 112.8 102 56.9
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 2.9e-23 112.1 102 56.9
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 2.9e-23 112.1 102 55.9
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 3.8e-23 111.7 102 56.9
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 3.8e-23 111.7 102 56.9
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 1.9e-22 109.4 74 77.0
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.9e-22 109.4 103 52.4
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 1.9e-22 109.4 102 53.9
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 1.9e-22 109.4 103 49.5
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 3.2e-22 108.6 102 52.9
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 3.2e-22 108.6 102 52.9
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 3.2e-22 108.6 102 52.9
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 3.2e-22 108.6 102 52.9
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 4.2e-22 108.2 102 54.9
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 7.2e-22 107.5 109 52.3
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 9.4e-22 107.1 102 54.9
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 1.2e-21 106.7 103 51.5
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.6e-21 106.3 103 49.5
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 4.7e-21 104.8 103 53.4
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 1.8e-20 102.8 88 58.0
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 2.3e-20 102.4 103 52.4
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 6.8e-20 100.9 101 49.5
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 7.5e-19 97.4 110 50.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 4.8e-18 94.7 61 67.2
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 1.8e-17 92.8 107 43.9
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 1.0e-15 87.0 101 46.5
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-15 86.7 81 53.1
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 2.3e-12 75.9 123 39.8
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 6.8e-12 74.3 68 57.4
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 1.2e-11 73.6 99 41.4
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.2e-10 69.3 103 38.8
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.2e-10 69.3 103 38.8
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.8e-10 68.2 40 75.0
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 3.1e-09 65.5 63 52.4
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 5.4e-09 64.7 43 67.4
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 4.5e-08 61.6 103 36.9
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.7e-07 59.7 102 38.2
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 1.1e-06 57.0 64 46.9
SHI10089 Sapria himalayana HOM05D000172 ORTHO05D369316 1.9e-06 56.2 117 30.8


User provided reference genes

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