Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.9e-117 425.2 212 100.0
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.2e-111 404.4 240 86.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 5.1e-90 334.7 212 79.2
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 2.9e-85 318.9 216 74.1
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 6.0e-83 311.2 214 73.4
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 5.1e-82 308.1 212 72.6
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.9e-81 306.2 212 71.7
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.3e-80 303.5 216 71.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.6e-78 295.8 194 75.3
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.4e-76 290.0 215 67.4
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.4e-76 290.0 229 64.2
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 4.2e-76 288.5 195 71.8
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.1e-75 286.2 215 66.5
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 3.5e-75 285.4 195 74.4
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 6.0e-75 284.6 215 66.0
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.9e-74 282.0 214 65.0
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.1e-72 276.2 215 64.7
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 4.8e-72 275.0 215 64.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.1e-71 273.9 215 64.7
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.1e-71 273.9 215 67.0
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-71 273.5 224 62.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 4.0e-71 271.9 214 64.0
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 9.0e-71 270.8 212 64.2
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.2e-70 270.4 215 63.7
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 2.0e-70 269.6 216 63.0
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 4.5e-70 268.5 232 59.9
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 5.8e-70 268.1 215 64.2
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 7.6e-70 267.7 215 66.0
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.0e-69 267.3 221 61.5
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.3e-69 266.9 212 63.2
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.7e-69 266.5 232 59.5
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.4e-68 263.5 216 62.5
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 1.4e-68 263.5 215 58.6
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 5.5e-68 261.5 212 61.8
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 7.1e-68 261.2 198 65.2
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 7.1e-68 261.2 198 65.2
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.6e-67 260.0 215 61.4
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 2.1e-67 259.6 216 59.3
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 3.5e-67 258.8 215 61.9
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.3e-66 256.9 195 64.6
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.3e-66 256.9 215 60.0
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.0e-66 255.8 198 66.2
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 8.7e-66 254.2 222 59.0
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.5e-65 253.4 215 60.9
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.9e-65 253.1 222 59.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 2.5e-65 252.7 215 59.1
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.7e-65 251.5 195 66.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 7.4e-65 251.1 215 56.7
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 9.6e-65 250.8 215 59.1
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.3e-64 250.4 223 56.1
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 4.8e-64 248.4 222 58.6
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 4.8e-64 248.4 214 58.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.1e-63 245.7 217 59.4
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.5e-62 243.4 215 59.1
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.6e-62 242.7 218 57.8
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.4e-62 242.3 217 57.6
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.4e-62 242.3 192 61.5
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 5.8e-62 241.5 219 56.6
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.6e-62 241.1 212 59.9
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.6e-62 241.1 232 56.5
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.0e-61 240.7 219 53.9
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.3e-61 240.4 217 56.7
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 1.3e-61 240.4 213 57.7
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.3e-61 240.4 214 55.1
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 5.0e-61 238.4 214 58.9
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 8.4e-61 237.7 211 56.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 8.4e-61 237.7 216 57.4
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.1e-60 237.3 216 57.4
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.9e-60 236.5 216 56.9
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 2.5e-60 236.1 212 55.7
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 3.5e-59 232.3 215 56.7
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 5.1e-58 228.4 217 53.9
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.1e-58 228.4 200 56.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.5e-57 226.9 182 61.0
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.5e-57 226.9 219 50.7
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.9e-57 226.5 198 57.6
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.3e-57 225.7 214 57.9
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.3e-57 225.3 217 51.6
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.3e-57 225.3 217 51.6
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 4.3e-57 225.3 217 51.6
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.6e-56 223.4 219 51.6
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.7e-56 222.2 219 50.7
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.4e-55 220.3 219 53.0
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.8e-55 219.9 236 47.5
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.4e-55 219.5 218 48.6
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.4e-55 219.5 208 58.2
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 4.1e-55 218.8 217 55.3
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 5.3e-55 218.4 219 50.7
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.2e-54 217.2 219 50.2
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.1e-52 210.7 195 54.4
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 3.2e-52 209.1 213 51.6
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.1e-51 206.5 210 54.3
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.1e-49 200.7 212 50.9
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 2.0e-49 199.9 212 53.3
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.5e-49 199.5 145 65.5
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.2e-46 190.7 207 51.7
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.0e-46 189.9 197 49.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 3.4e-46 189.1 206 47.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 8.5e-45 184.5 214 50.5
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.0e-42 177.6 135 63.0
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 3.1e-39 166.0 212 44.8
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.0e-34 151.0 140 57.9
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.5e-33 147.1 220 41.4
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 3.7e-32 142.5 222 37.4
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.4e-31 139.8 131 51.1
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 3.5e-30 136.0 185 40.0
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.1e-19 100.1 108 43.5
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 3.8e-13 79.3 150 37.3
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 1.6e-11 73.9 82 53.7
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.0e-10 71.2 51 54.9
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 4.0e-10 69.3 108 36.1


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