Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 2.0e-222 775.4 371 100.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 6.6e-194 680.6 319 99.4
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.2e-155 553.5 319 79.0
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 1.3e-154 550.1 319 78.1
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 4.3e-153 545.0 319 77.1
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.1e-152 542.7 319 77.4
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.8e-152 542.3 319 79.6
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.8e-152 541.6 319 77.7
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 3.1e-151 538.9 333 75.4
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 3.1e-151 538.9 319 79.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 6.9e-151 537.7 314 80.3
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.2e-150 537.0 320 75.6
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.2e-150 537.0 319 78.7
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.0e-150 536.2 320 77.2
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.4e-150 535.4 320 77.8
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 5.9e-150 534.6 320 75.3
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 5.9e-150 534.6 319 74.3
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 5.9e-150 534.6 319 74.0
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.0e-149 533.9 320 77.2
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 5.0e-149 531.6 319 74.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 6.5e-149 531.2 323 73.1
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.1e-148 530.4 319 75.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.9e-148 529.6 312 76.9
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.5e-148 529.3 318 77.7
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.2e-148 528.9 324 73.8
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 5.5e-148 528.1 319 74.6
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.5e-148 528.1 324 73.5
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 5.5e-148 528.1 320 76.6
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.2e-147 526.9 319 75.2
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.6e-147 526.6 320 75.9
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-147 526.6 320 76.2
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.1e-147 526.2 324 73.5
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 2.1e-147 526.2 319 74.3
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 2.1e-147 526.2 318 77.0
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 2.7e-147 525.8 320 75.0
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.5e-147 525.4 319 74.3
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 3.5e-147 525.4 319 74.6
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.6e-147 525.0 319 75.9
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 4.6e-147 525.0 319 74.9
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 7.9e-147 524.2 319 74.6
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.8e-146 523.1 317 74.4
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 2.3e-146 522.7 319 72.1
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.3e-146 522.7 319 73.7
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 3.0e-146 522.3 319 73.4
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.1e-146 521.5 320 73.4
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.1e-145 520.4 320 73.8
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 5.7e-145 518.1 319 72.7
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 5.7e-145 518.1 319 73.4
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.4e-145 517.7 333 71.5
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 9.7e-145 517.3 319 71.5
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.6e-144 516.5 319 74.0
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 3.7e-144 515.4 319 71.2
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 4.8e-144 515.0 319 71.5
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 6.3e-144 514.6 319 71.2
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 6.3e-144 514.6 319 73.7
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 6.3e-144 514.6 324 71.6
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.2e-144 514.2 319 73.0
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.1e-143 513.8 319 70.8
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.1e-143 513.8 321 73.5
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.4e-143 513.5 320 73.1
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.1e-143 511.9 320 71.9
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.3e-143 511.5 317 72.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 6.9e-143 511.1 319 72.4
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 9.0e-143 510.8 319 72.1
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.2e-142 510.4 314 73.2
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 2.0e-142 509.6 319 73.7
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.6e-142 509.2 314 73.2
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 4.5e-142 508.4 314 72.3
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.3e-141 506.9 319 70.8
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.7e-141 506.5 356 66.0
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.7e-141 506.5 319 72.4
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 2.2e-141 506.1 319 69.9
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 3.8e-141 505.4 319 71.5
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 8.5e-141 504.2 319 71.2
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 8.5e-141 504.2 319 70.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.4e-140 503.4 319 71.8
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 1.4e-140 503.4 319 70.8
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 9.4e-140 500.7 315 71.4
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.6e-139 500.0 319 70.5
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.7e-139 499.2 305 73.1
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 2.7e-139 499.2 319 71.2
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 2.7e-139 499.2 319 70.2
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 2.7e-139 499.2 315 71.1
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.0e-138 497.3 325 69.5
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 3.9e-138 495.4 319 69.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.1e-137 493.8 319 69.3
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.5e-137 493.4 319 70.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.3e-137 491.9 319 69.0
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 6.3e-136 488.0 309 71.5
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.4e-135 486.9 319 70.2
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.4e-135 486.9 307 70.7
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.8e-135 486.5 301 72.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.8e-135 486.5 307 71.0
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.3e-135 485.0 319 67.4
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.9e-135 484.6 315 69.2
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 6.9e-135 484.6 319 68.3
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.5e-134 483.4 314 69.4
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.4e-134 482.3 313 69.0
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 7.7e-134 481.1 311 68.8
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 3.8e-133 478.8 319 66.5
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.4e-132 476.9 319 66.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 4.2e-132 475.3 318 67.6
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 5.5e-132 474.9 319 70.5
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 3.6e-131 472.2 304 69.4
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.1e-131 471.5 296 70.9
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.1e-130 468.4 306 68.0
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 4.4e-129 465.3 327 65.4
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 4.4e-129 465.3 327 65.4
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 7.4e-129 464.5 327 65.7
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.3e-128 463.8 327 65.4
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.3e-128 463.8 319 63.3
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 3.7e-128 462.2 306 67.6
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 4.8e-128 461.8 305 64.3
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 6.3e-128 461.5 306 67.6
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.1e-127 459.1 306 66.7
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 4.1e-127 458.8 319 65.5
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.2e-126 457.2 306 67.0
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.2e-126 457.2 306 67.0
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.5e-126 455.7 308 65.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 4.5e-126 455.3 306 66.3
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 8.5e-125 451.1 317 65.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.9e-124 449.9 319 62.1
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 4.4e-121 438.7 327 63.0
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 5.7e-121 438.3 291 68.4
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.2e-120 436.4 319 62.7
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.0e-117 427.6 319 60.5
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.0e-117 425.2 282 68.1
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 5.0e-117 425.2 317 61.8
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 6.5e-117 424.9 316 61.1
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 8.5e-117 424.5 273 68.9
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.8e-114 416.8 313 63.6
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.7e-113 411.8 307 59.0
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-108 397.1 317 60.6
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.5e-108 397.1 317 60.6
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.5e-108 396.4 306 56.9
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.7e-107 392.9 308 56.8
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.2e-102 377.5 333 53.5
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.7e-99 365.5 297 59.3
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.7e-96 357.1 217 71.9
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 5.9e-94 348.6 225 66.2
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 6.8e-90 335.1 310 51.0
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.6e-89 333.2 309 51.8
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 3.2e-87 326.2 275 60.0
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.9e-72 276.6 308 46.1
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.0e-69 268.1 182 67.6
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.1e-59 233.8 262 47.3
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 7.6e-49 198.7 135 69.6
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 3.2e-47 193.4 324 36.1
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.3e-45 188.0 113 75.2
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.3e-45 187.2 126 61.9
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 5.1e-37 159.5 327 30.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 8.7e-37 158.7 253 39.1
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.1e-28 131.7 345 28.4
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.5e-25 121.3 95 56.8
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 9.4e-15 85.5 61 63.9
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 2.7e-14 84.0 74 56.8


User provided reference genes

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