Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 2.8e-163 578.6 290 100.0
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 9.6e-108 394.0 253 82.2
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 9.6e-108 394.0 253 82.2
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 7.7e-97 357.8 252 76.6
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 1.9e-95 353.2 256 74.6
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 1.6e-94 350.1 253 74.3
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 7.9e-94 347.8 253 72.7
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 1.4e-93 347.1 254 72.4
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 5.1e-93 345.1 256 71.5
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 2.6e-92 342.8 255 71.8
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 4.4e-92 342.0 253 71.9
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 5.7e-92 341.7 255 71.0
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 7.4e-92 341.3 256 70.7
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 1.7e-91 340.1 253 71.9
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 6.3e-91 338.2 253 71.5
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 1.8e-90 336.7 257 70.4
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 1.5e-89 333.6 253 70.4
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.6e-89 332.8 255 69.4
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 2.6e-89 332.8 255 69.4
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 5.9e-89 331.6 256 69.9
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 1.3e-88 330.5 253 69.6
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 1.7e-88 330.1 255 69.4
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 3.8e-88 328.9 261 68.2
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 3.8e-88 328.9 257 69.3
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 5.0e-88 328.6 263 68.4
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 1.1e-87 327.4 253 70.4
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.4e-87 327.0 263 67.3
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.4e-87 327.0 253 69.2
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 3.2e-87 325.9 238 71.8
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.2e-87 325.9 263 67.3
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 4.2e-87 325.5 263 67.3
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 9.4e-87 324.3 253 69.6
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 1.2e-86 323.9 264 66.7
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 1.2e-86 323.9 264 66.7
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.6e-86 323.6 263 68.4
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.6e-86 323.6 263 68.4
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 1.6e-86 323.6 253 69.2
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 1.6e-86 323.6 253 69.6
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.6e-86 323.6 261 66.7
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 2.1e-86 323.2 264 67.4
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 2.7e-86 322.8 261 66.7
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 4.7e-86 322.0 263 67.3
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.0e-85 320.9 257 68.1
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 1.4e-85 320.5 253 68.8
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 2.3e-85 319.7 255 68.6
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 2.3e-85 319.7 255 68.6
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 2.3e-85 319.7 253 68.8
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 2.3e-85 319.7 252 69.0
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 3.0e-85 319.3 255 68.2
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 5.2e-85 318.5 253 68.4
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 5.2e-85 318.5 253 68.4
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 5.2e-85 318.5 253 68.0
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 5.2e-85 318.5 253 68.4
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 6.7e-85 318.2 256 68.0
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 8.8e-85 317.8 255 68.2
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 1.1e-84 317.4 253 68.0
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.1e-84 317.4 253 68.0
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 1.5e-84 317.0 253 68.0
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.5e-84 317.0 264 66.3
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 2.0e-84 316.6 255 67.1
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 2.0e-84 316.6 253 66.4
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 2.0e-84 316.6 256 66.8
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.3e-84 315.8 257 66.5
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.3e-84 315.8 257 66.1
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 4.4e-84 315.5 256 66.8
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 4.4e-84 315.5 253 67.6
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 5.7e-84 315.1 255 67.5
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 5.7e-84 315.1 255 67.8
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 9.7e-84 314.3 253 67.6
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 9.7e-84 314.3 253 67.6
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 9.7e-84 314.3 239 69.9
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 9.7e-84 314.3 253 67.2
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.3e-83 313.9 255 66.7
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 1.3e-83 313.9 253 67.2
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 1.7e-83 313.5 253 67.6
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 2.2e-83 313.2 257 67.3
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 2.8e-83 312.8 255 66.7
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 2.8e-83 312.8 302 58.9
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 3.7e-83 312.4 253 66.0
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 3.7e-83 312.4 261 64.8
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 4.8e-83 312.0 255 67.1
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 4.8e-83 312.0 256 65.6
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 6.3e-83 311.6 256 66.4
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 8.2e-83 311.2 267 64.8
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 8.2e-83 311.2 253 66.4
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 1.4e-82 310.5 253 66.4
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 1.4e-82 310.5 255 65.9
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 1.4e-82 310.5 260 65.0
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.8e-82 310.1 253 66.0
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 2.4e-82 309.7 254 67.3
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 2.4e-82 309.7 254 67.3
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 2.4e-82 309.7 254 67.3
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 2.4e-82 309.7 254 66.5
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 3.1e-82 309.3 253 67.2
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 3.1e-82 309.3 255 65.5
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 4.1e-82 308.9 255 66.3
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 4.1e-82 308.9 255 66.3
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 9.1e-82 307.8 255 64.3
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.2e-81 307.4 166 92.2
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.2e-81 307.4 253 66.8
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 2.0e-81 306.6 256 64.5
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 2.2e-80 303.1 253 65.2
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 2.2e-80 303.1 239 67.4
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 1.1e-79 300.8 255 65.5
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 1.9e-79 300.1 264 61.7
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.9e-79 300.1 286 59.4
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 2.5e-79 299.7 287 59.2
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 5.5e-79 298.5 253 64.8
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 1.2e-78 297.4 276 62.3
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 1.2e-78 297.4 294 57.8
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 3.6e-78 295.8 253 63.2
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 4.7e-78 295.4 254 63.4
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 1.8e-77 293.5 255 61.2
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 3.0e-77 292.7 233 67.0
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 4.0e-77 292.4 255 63.1
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.4e-76 288.9 212 72.2
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 6.3e-75 285.0 270 61.1
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 2.2e-72 276.6 227 66.1
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 8.5e-72 274.6 255 61.6
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 9.4e-71 271.2 256 59.8
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 4.0e-69 265.8 217 65.0
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 7.5e-68 261.5 179 76.0
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 8.3e-67 258.1 253 54.9
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 1.4e-66 257.3 170 78.8
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 5.0e-64 248.8 258 54.7
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.3e-61 240.0 263 54.4
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 3.1e-58 229.6 253 48.2
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 2.7e-57 226.5 242 48.8
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 4.3e-55 219.2 264 50.0
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 4.3e-55 219.2 262 45.4
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 7.3e-55 218.4 237 55.3
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 3.0e-53 213.0 253 45.8
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 6.8e-53 211.8 169 67.5
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 4.6e-49 199.1 231 44.6
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 4.7e-46 189.1 255 46.3
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.0e-45 188.0 252 42.5
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 2.2e-35 153.7 115 70.4
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 5.4e-34 149.1 106 71.7
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 5.4e-34 149.1 190 41.6
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 4.7e-30 136.0 191 40.8
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.1e-29 133.3 95 70.5
Oeu049910.1 Olea europaea HOM05D000361 ORTHO05D004243 6.8e-29 132.1 145 53.1
MD11G1314200 Malus domestica HOM05D000361 ORTHO05D004243 4.9e-27 125.9 110 63.6
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 6.4e-27 125.6 177 38.4
Glyma.14G155300 Glycine max HOM05D000361 ORTHO05D004243 2.4e-26 123.6 121 54.5
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 2.1e-25 120.6 114 56.1
Gorai.008G140000 Gossypium raimondii HOM05D000361 ORTHO05D004243 6.9e-21 105.5 85 61.2
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 2.2e-19 100.5 52 90.4
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 5.4e-18 95.9 97 57.7
Lj2A1205T45 Lonicera japonica HOM05D000361 ORTHO05D004243 3.3e-15 86.7 49 85.7
CAN.G1393.2 Capsicum annuum HOM05D005033 ORTHO05D005387 5.6e-15 85.9 72 62.5
arahy.Tifrunner.gnm1.ann1.N1N6FA Arachis hypogaea HOM05D000745 ORTHO05D000641 7.3e-15 85.5 51 84.3
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 1.4e-13 81.3 53 81.1
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 1.8e-13 80.9 43 95.3
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 4.0e-13 79.7 115 34.8
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 7.1e-10 68.9 35 94.3
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 7.9e-09 65.5 71 52.1
Medtr1g087050 Medicago truncatula HOM05D000361 ORTHO05D004243 1.3e-08 64.7 35 88.6
Pp3c11_13110 Physcomitrium patens HOM05D003652 ORTHO05D004190 3.7e-06 56.6 148 26.4


User provided reference genes

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