Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z055HV Arachis hypogaea HOM05D000444 ORTHO05D084939 6.8e-44 180.3 90 100.0
arahy.Tifrunner.gnm1.ann1.5TIT61 Arachis hypogaea HOM05D000444 ORTHO05D003472 2.4e-12 75.5 83 56.6
arahy.Tifrunner.gnm1.ann1.N6D8R0 Arachis hypogaea HOM05D000444 ORTHO05D003472 2.4e-12 75.5 83 56.6
arahy.Tifrunner.gnm1.ann1.VY6APJ Arachis hypogaea HOM05D000444 ORTHO05D003472 2.4e-12 75.5 83 56.6
arahy.Tifrunner.gnm1.ann1.5QYC8P Arachis hypogaea HOM05D000444 ORTHO05D003526 2.4e-09 65.5 90 44.4
arahy.Tifrunner.gnm1.ann1.24E10Z Arachis hypogaea HOM05D000444 ORTHO05D003472 1.6e-08 62.8 40 77.5
Ca_19240_v3 Cicer arietinum L. HOM05D000444 ORTHO05D003472 1.6e-08 62.8 56 64.3
Medtr4g060900 Medicago truncatula HOM05D000444 ORTHO05D003472 2.1e-08 62.4 56 62.5
Psat7g223240 Pisum sativum HOM05D000444 ORTHO05D003472 2.1e-08 62.4 83 47.0
Glyma.11G152751 Glycine max HOM05D000444 ORTHO05D003472 3.5e-08 61.6 83 47.0
TPR.G14915 Trifolium pratense HOM05D000444 ORTHO05D003472 4.6e-08 61.2 83 48.2
QL01p037109 Quercus lobata HOM05D000444 ORTHO05D003472 7.8e-08 60.5 83 49.4
Phvul.011G072400 Phaseolus vulgaris HOM05D000444 ORTHO05D003472 2.3e-07 58.9 56 58.9
RcHm_v2.0_Chr5g0060781 Rosa chinensis HOM05D000444 ORTHO05D003472 3.9e-07 58.2 83 48.2
PGR119G2493 Punica granatum HOM05D000444 ORTHO05D003472 5.1e-07 57.8 83 48.2
TAR623G1750 Trochodendron aralioides HOM05D000444 ORTHO05D003472 5.1e-07 57.8 83 47.0
FAN11G1848 Fragaria x ananassa HOM05D000444 ORTHO05D003472 6.6e-07 57.4 83 47.0
Lj1C184T9 Lonicera japonica HOM05D000444 ORTHO05D003472 6.6e-07 57.4 85 44.7
Haze_23918 Corylus avellana HOM05D000444 ORTHO05D003472 8.7e-07 57.0 83 45.8
Glyma.12G071800 Glycine max HOM05D000444 ORTHO05D003472 8.7e-07 57.0 55 60.0
VMungo1127G0171 Vigna mungo HOM05D000444 ORTHO05D003472 8.7e-07 57.0 83 44.6
Cfa011367 Carpinus fangiana HOM05D000444 ORTHO05D003472 1.1e-06 56.6 83 45.8
Lj3g0011846 Lotus japonicus HOM05D000444 ORTHO05D003472 1.1e-06 56.6 83 45.8
Nitab4.5_0001802g0110 Nicotiana tabacum HOM05D000444 ORTHO05D003472 1.5e-06 56.2 56 51.8
Nitab4.5_0002129g0090 Nicotiana tabacum HOM05D000444 ORTHO05D003472 1.5e-06 56.2 56 51.8
Prupe.6G094600 Prunus persica HOM05D000444 ORTHO05D003472 1.5e-06 56.2 83 45.8
Solyc11g072440.2 Solanum lycopersicum HOM05D000444 ORTHO05D003472 1.5e-06 56.2 56 50.0
PGSC0003DMG400027375 Solanum tuberosum HOM05D000444 ORTHO05D003472 1.5e-06 56.2 52 53.8
Atru.chr3.3694 Acer truncatum HOM05D000444 ORTHO05D003472 1.9e-06 55.8 83 44.6
Dinv32791 Davidia involucrata HOM05D000444 ORTHO05D003472 1.9e-06 55.8 83 42.2
FvH4_3g33440 Fragaria vesca HOM05D000444 ORTHO05D003472 1.9e-06 55.8 83 45.8
Lalb_Chr03g0027101 Lupinus albus HOM05D000444 ORTHO05D003472 1.9e-06 55.8 56 58.9
Manes.04G025100 Manihot esculenta HOM05D000444 ORTHO05D003472 2.5e-06 55.5 56 57.1
Eucgr.J00955 Eucalyptus grandis HOM05D000444 ORTHO05D003472 3.3e-06 55.1 56 57.1
Nitab4.5_0012065g0010 Nicotiana tabacum HOM05D000444 ORTHO05D003472 3.3e-06 55.1 83 43.4
CAN.G553.13 Capsicum annuum HOM05D000444 ORTHO05D003472 4.3e-06 54.7 58 46.6
DCAR_018832 Daucus carota HOM05D000444 ORTHO05D003472 4.3e-06 54.7 85 44.7
Gohir.A07G116200 Gossypium hirsutum HOM05D000444 ORTHO05D003472 5.6e-06 54.3 47 61.7
Gohir.D07G120600 Gossypium hirsutum HOM05D000444 ORTHO05D003472 5.6e-06 54.3 47 61.7
Thecc.09G260400 Theobroma cacao HOM05D000444 ORTHO05D003472 5.6e-06 54.3 47 61.7
ECA233G5527 Erigeron canadensis HOM05D000444 ORTHO05D003472 7.3e-06 53.9 85 42.4
Nn2g10679 Nelumbo nucifera HOM05D000444 ORTHO05D003472 7.3e-06 53.9 83 43.4
Sopen11g030080 Solanum pennellii HOM05D000444 ORTHO05D003472 7.3e-06 53.9 52 51.9
TWI75G0881 Tripterygium wilfordii HOM05D000444 ORTHO05D003472 7.3e-06 53.9 82 46.3
Cc01_g11560 Coffea canephora HOM05D000444 ORTHO05D003472 9.6e-06 53.5 83 42.2
FAN16G1180 Fragaria x ananassa HOM05D000444 ORTHO05D003472 9.6e-06 53.5 83 44.6


User provided reference genes

Program Settings