Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 1.6e-68 262.7 136 100.0
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 1.3e-54 216.5 116 98.3
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 4.0e-48 194.9 121 85.1
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 1.9e-37 159.5 123 74.8
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 4.2e-37 158.3 122 73.8
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.2e-36 156.8 122 73.8
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.2e-36 156.8 120 71.7
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 5.1e-35 151.4 109 77.1
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 5.1e-35 151.4 121 72.7
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 8.7e-35 150.6 121 71.9
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.1e-34 150.2 118 71.2
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 5.6e-34 147.9 122 68.0
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 5.3e-32 141.4 135 62.2
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 2.6e-31 139.0 108 69.4
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 2.7e-28 129.0 99 69.7
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 6.0e-28 127.9 99 68.7
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.3e-27 126.7 95 70.5
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.8e-27 126.3 96 67.7
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 2.3e-27 125.9 105 62.9
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.9e-26 122.9 102 63.7
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.9e-26 122.9 102 63.7
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 3.3e-26 122.1 101 64.4
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 5.7e-26 121.3 106 62.3
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 7.4e-26 120.9 106 60.4
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.3e-25 120.2 102 59.8
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 2.2e-25 119.4 106 58.5
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 2.8e-25 119.0 106 62.3
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 2.8e-25 119.0 98 65.3
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 4.8e-25 118.2 97 63.9
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 8.2e-25 117.5 105 62.9
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 8.2e-25 117.5 102 61.8
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 1.1e-24 117.1 115 55.7
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.4e-24 116.7 96 61.5
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.8e-24 116.3 105 61.9
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 1.8e-24 116.3 106 57.5
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 3.1e-24 115.5 117 56.4
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 4.1e-24 115.2 106 58.5
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 4.1e-24 115.2 106 58.5
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 4.1e-24 115.2 89 67.4
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 6.9e-24 114.4 106 57.5
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 1.2e-23 113.6 94 63.8
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.5e-23 113.2 90 63.3
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 1.5e-23 113.2 103 63.1
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.0e-23 112.8 94 61.7
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.0e-23 112.8 106 57.5
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 2.6e-23 112.5 107 60.7
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.4e-23 112.1 85 65.9
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.5e-23 111.7 84 65.5
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 1.0e-22 110.5 82 68.3
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.0e-22 110.5 109 58.7
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.3e-22 110.2 117 56.4
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.9e-22 109.0 115 55.7
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.9e-22 109.0 82 63.4
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 3.8e-22 108.6 103 55.3
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 3.8e-22 108.6 98 55.1
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 3.8e-22 108.6 116 56.0
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 3.8e-22 108.6 112 55.4
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 5.0e-22 108.2 94 58.5
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 5.0e-22 108.2 105 59.0
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 5.0e-22 108.2 111 54.1
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 6.5e-22 107.8 94 63.8
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 6.5e-22 107.8 112 55.4
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 6.5e-22 107.8 116 53.4
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 6.5e-22 107.8 116 53.4
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 8.5e-22 107.5 105 55.2
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 8.5e-22 107.5 127 49.6
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.1e-21 107.1 76 69.7
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 1.4e-21 106.7 106 57.5
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.9e-21 106.3 103 55.3
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 2.5e-21 105.9 127 50.4
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 2.5e-21 105.9 107 55.1
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.5e-21 105.9 74 68.9
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.5e-21 105.9 90 60.0
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 2.5e-21 105.9 98 62.2
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 2.5e-21 105.9 82 62.2
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 3.2e-21 105.5 97 57.7
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 4.2e-21 105.1 100 59.0
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 4.2e-21 105.1 97 58.8
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 4.2e-21 105.1 104 54.8
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 5.5e-21 104.8 117 52.1
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 7.2e-21 104.4 97 56.7
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 9.4e-21 104.0 78 66.7
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 9.4e-21 104.0 106 53.8
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 1.2e-20 103.6 107 54.2
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.6e-20 103.2 107 54.2
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.6e-20 103.2 101 55.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 1.6e-20 103.2 88 59.1
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 2.1e-20 102.8 98 59.2
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 2.7e-20 102.4 90 63.3
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.7e-20 102.4 78 65.4
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 2.7e-20 102.4 84 63.1
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 2.7e-20 102.4 90 58.9
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.7e-20 102.4 90 58.9
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 3.6e-20 102.1 109 51.4
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.6e-20 102.1 117 52.1
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 4.6e-20 101.7 111 52.3
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 4.6e-20 101.7 110 50.0
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.6e-20 101.7 106 53.8
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 6.1e-20 101.3 130 47.7
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 6.1e-20 101.3 130 47.7
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 6.1e-20 101.3 130 47.7
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 7.9e-20 100.9 94 55.3
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 7.9e-20 100.9 97 55.7
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 1.0e-19 100.5 108 50.0
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 1.0e-19 100.5 108 50.0
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.0e-19 100.5 89 58.4
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.4e-19 100.1 108 50.9
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.4e-19 100.1 88 62.5
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.4e-19 100.1 88 62.5
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.4e-19 100.1 88 60.2
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 3.0e-19 99.0 83 65.1
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 5.1e-19 98.2 96 56.2
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 5.1e-19 98.2 114 50.0
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 6.7e-19 97.8 73 63.0
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 8.8e-19 97.4 73 63.0
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 1.1e-18 97.1 71 66.2
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.3e-17 93.6 109 47.7
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.8e-17 92.4 71 59.2
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 3.7e-17 92.0 82 56.1
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 1.4e-16 90.1 105 47.6
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 5.9e-15 84.7 64 60.9
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.4e-13 80.1 58 58.6
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 5.5e-13 78.2 63 57.1
Ca_10674_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.4e-11 73.6 122 50.0
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.3e-11 72.8 76 46.1
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.9e-11 72.0 69 47.8
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 2.8e-09 65.9 65 52.3
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 2.6e-07 59.3 49 59.2
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 4.5e-07 58.5 50 66.0


User provided reference genes

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