Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YNV65N Arachis hypogaea HOM05D001767 ORTHO05D001714 1.4e-40 169.1 83 100.0
arahy.Tifrunner.gnm1.ann1.MY28PR Arachis hypogaea HOM05D001767 ORTHO05D001714 3.2e-32 141.4 105 73.3
arahy.Tifrunner.gnm1.ann1.5ZM0GR Arachis hypogaea HOM05D001767 ORTHO05D001714 4.7e-31 137.5 105 71.4
arahy.Tifrunner.gnm1.ann1.V1PJFK Arachis hypogaea HOM05D001767 ORTHO05D001714 6.1e-23 110.5 75 68.0
arahy.Tifrunner.gnm1.ann1.NPKG4I Arachis hypogaea HOM05D001767 ORTHO05D001714 1.0e-22 109.8 72 72.2
arahy.Tifrunner.gnm1.ann1.RLF8R8 Arachis hypogaea HOM05D001767 ORTHO05D001714 5.7e-21 104.0 93 64.5
arahy.Tifrunner.gnm1.ann1.SXX5S1 Arachis hypogaea HOM05D001767 ORTHO05D001714 5.3e-19 97.4 74 66.2
arahy.Tifrunner.gnm1.ann1.BE15RV Arachis hypogaea HOM05D001767 ORTHO05D001714 1.5e-16 89.4 76 61.8
arahy.Tifrunner.gnm1.ann1.Q9N224 Arachis hypogaea HOM05D001767 ORTHO05D001714 4.7e-15 84.3 60 66.7
arahy.Tifrunner.gnm1.ann1.1HKZ2P Arachis hypogaea HOM05D001767 ORTHO05D001714 1.2e-13 79.7 76 56.6
arahy.Tifrunner.gnm1.ann1.EHX2CQ Arachis hypogaea HOM05D001767 ORTHO05D001714 2.6e-13 78.6 53 69.8
arahy.Tifrunner.gnm1.ann1.P94LHC Arachis hypogaea HOM05D001767 ORTHO05D001714 8.3e-12 73.6 52 67.3
arahy.Tifrunner.gnm1.ann1.J3GQLC Arachis hypogaea HOM05D001767 ORTHO05D084207 1.6e-10 69.3 37 91.9
Glyma.15G083000 Glycine max HOM05D001767 ORTHO05D001714 1.3e-09 66.2 66 56.1
arahy.Tifrunner.gnm1.ann1.2ZX1NK Arachis hypogaea HOM05D001767 ORTHO05D086133 2.2e-09 65.5 80 50.0
MSTRG.7411 Avicennia marina HOM05D001767 ORTHO05D001714 2.2e-09 65.5 73 50.7
Gohir.A10G036900 Gossypium hirsutum HOM05D001767 ORTHO05D001714 2.2e-09 65.5 63 58.7
Gohir.D10G037500 Gossypium hirsutum HOM05D001767 ORTHO05D001714 2.2e-09 65.5 63 58.7
Gorai.011G039500 Gossypium raimondii HOM05D001767 ORTHO05D001714 2.2e-09 65.5 63 58.7
Psat1g197920 Pisum sativum HOM05D001767 ORTHO05D001714 2.2e-09 65.5 76 51.3
arahy.Tifrunner.gnm1.ann1.GZFQ7P Arachis hypogaea HOM05D001767 ORTHO05D001714 3.8e-09 64.7 62 58.1
arahy.Tifrunner.gnm1.ann1.2VSR2R Arachis hypogaea HOM05D001767 ORTHO05D001714 5.0e-09 64.3 62 56.5
Dinv16774 Davidia involucrata HOM05D001767 ORTHO05D001714 5.0e-09 64.3 67 55.2
Gohir.D06G137200 Gossypium hirsutum HOM05D001767 ORTHO05D001714 5.0e-09 64.3 69 55.1
Gorai.010G159400 Gossypium raimondii HOM05D001767 ORTHO05D001714 5.0e-09 64.3 69 55.1
Nn1g04422 Nelumbo nucifera HOM05D001767 ORTHO05D001714 5.0e-09 64.3 67 56.7
Glyma.13G229500 Glycine max HOM05D001767 ORTHO05D001714 6.5e-09 63.9 66 54.5
Gohir.A06G131100 Gossypium hirsutum HOM05D001767 ORTHO05D001714 6.5e-09 63.9 70 54.3
ClCG01G023750 Citrullus lanatus HOM05D001767 ORTHO05D000636 1.1e-08 63.2 70 51.4
Migut.H01435 Erythranthe guttata HOM05D001767 ORTHO05D001714 1.5e-08 62.8 74 45.9
Phvul.006G175900 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 1.5e-08 62.8 65 53.8
Duzib160G0244 Durio zibethinus HOM05D001767 ORTHO05D001714 1.9e-08 62.4 70 51.4
COL.COLO4_31289 Corchorus olitorius HOM05D001767 ORTHO05D001714 2.5e-08 62.0 70 50.0
CsaV3_1G033300 Cucumis sativus L. HOM05D001767 ORTHO05D001714 3.2e-08 61.6 70 51.4
Sed0005326 Sechium edule HOM05D001767 ORTHO05D001714 3.2e-08 61.6 72 48.6
MELO3C002655.2 Cucumis melo HOM05D001767 ORTHO05D001714 4.2e-08 61.2 71 50.7
VMungo0540G2071 Vigna mungo HOM05D001767 ORTHO05D001714 4.2e-08 61.2 65 52.3
CiPaw.10G059300 Carya illinoinensis HOM05D001767 ORTHO05D001714 5.5e-08 60.8 69 50.7
CiPaw.09G070100 Carya illinoinensis HOM05D001767 ORTHO05D001714 7.2e-08 60.5 73 47.9
Potri.011G066500 Populus trichocarpa HOM05D001767 ORTHO05D001714 7.2e-08 60.5 72 47.2
Thecc.06G170200 Theobroma cacao HOM05D001767 ORTHO05D001714 7.2e-08 60.5 65 55.4
Ca_00438_v3 Cicer arietinum L. HOM05D001767 ORTHO05D001714 9.4e-08 60.1 64 53.1
Lalb_Chr15g0086111 Lupinus albus HOM05D001767 ORTHO05D001714 9.4e-08 60.1 68 52.9
Rhsim13G0189800 Rhododendron simsii HOM05D001767 ORTHO05D001714 9.4e-08 60.1 73 46.6
SalBow8G3465 Salvia bowleyana HOM05D001767 ORTHO05D001714 9.4e-08 60.1 80 46.2
CSS0012076 Camellia sinensis var. sinensis HOM05D001767 ORTHO05D001714 1.2e-07 59.7 67 53.7
ClCG03G007660 Citrullus lanatus HOM05D001767 ORTHO05D001714 1.2e-07 59.7 67 52.2
Ciclev10016924m.g Citrus clementina HOM05D001767 ORTHO05D001714 1.2e-07 59.7 67 52.2
TWI63G1557 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 1.2e-07 59.7 67 52.2
Cfa000611 Carpinus fangiana HOM05D001767 ORTHO05D001714 1.6e-07 59.3 73 46.6
Sed0022533 Sechium edule HOM05D001767 ORTHO05D001714 1.6e-07 59.3 75 46.7
TPR.G11647 Trifolium pratense HOM05D001767 ORTHO05D001714 1.6e-07 59.3 65 52.3
HanXRQChr17g0565091 Helianthus annuus HOM05D001767 ORTHO05D001714 2.7e-07 58.5 88 44.3
Potri.004G057500 Populus trichocarpa HOM05D001767 ORTHO05D001714 2.7e-07 58.5 72 44.4
Sabra11G0048100 Salix brachista HOM05D001767 ORTHO05D001714 2.7e-07 58.5 72 45.8
Duzib235G0814 Durio zibethinus HOM05D001767 ORTHO05D001714 3.6e-07 58.2 65 53.8
Manes.17G056100 Manihot esculenta HOM05D001767 ORTHO05D001714 3.6e-07 58.2 63 54.0
MSTRG.13223 Avicennia marina HOM05D001767 ORTHO05D001714 4.7e-07 57.8 73 45.2
CsaV3_6G050920 Cucumis sativus L. HOM05D001767 ORTHO05D001714 4.7e-07 57.8 63 52.4
Eucgr.D00486 Eucalyptus grandis HOM05D001767 ORTHO05D001714 4.7e-07 57.8 74 44.6
FAN25G1376 Fragaria x ananassa HOM05D001767 ORTHO05D001714 4.7e-07 57.8 62 54.8
MD05G1300400 Malus domestica HOM05D001767 ORTHO05D001714 4.7e-07 57.8 66 53.0
MD10G1279500 Malus domestica HOM05D001767 ORTHO05D001714 4.7e-07 57.8 62 54.8
Peaxi162Scf01979g00003 Petunia axillaris HOM05D001767 ORTHO05D001714 4.7e-07 57.8 61 50.8
QL05p047295 Quercus lobata HOM05D001767 ORTHO05D001714 4.7e-07 57.8 60 55.0
SalBow7G3903 Salvia bowleyana HOM05D001767 ORTHO05D001714 4.7e-07 57.8 60 55.0
FvH4_3g07740 Fragaria vesca HOM05D001767 ORTHO05D001714 6.1e-07 57.4 62 54.8
FAN11G1865 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.1e-07 57.4 62 54.8
FAN16G1800 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.1e-07 57.4 62 54.8
FAN21G0775 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.1e-07 57.4 62 54.8
Nn1g09120 Nelumbo nucifera HOM05D001767 ORTHO05D001714 6.1e-07 57.4 66 51.5
Nitab4.5_0012052g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 8.0e-07 57.0 69 46.4
Prupe.4G061900 Prunus persica HOM05D001767 ORTHO05D001714 8.0e-07 57.0 80 46.2
Sabra04G0037200 Salix brachista HOM05D001767 ORTHO05D001714 8.0e-07 57.0 61 52.5
Sopen02g021700 Solanum pennellii HOM05D001767 ORTHO05D001714 8.0e-07 57.0 69 47.8
arahy.Tifrunner.gnm1.ann1.QG943N Arachis hypogaea HOM05D001167 ORTHO05D021503 1.0e-06 56.6 38 71.1
MSTRG.14735 Avicennia marina HOM05D001767 ORTHO05D001714 1.0e-06 56.6 65 50.8
RcHm_v2.0_Chr5g0010861 Rosa chinensis HOM05D001767 ORTHO05D001714 1.0e-06 56.6 75 45.3
Duzib192G0143 Durio zibethinus HOM05D001767 ORTHO05D001714 1.4e-06 56.2 69 50.7
ECA234G1876 Erigeron canadensis HOM05D001767 ORTHO05D001714 1.4e-06 56.2 75 45.3
Lsat_1_v5_gn_4_49061 Lactuca sativa HOM05D001767 ORTHO05D001714 1.4e-06 56.2 64 51.6
Lj1P1192T21 Lonicera japonica HOM05D001767 ORTHO05D001714 1.4e-06 56.2 59 55.9
PGR031G1155 Punica granatum HOM05D001767 ORTHO05D001714 1.4e-06 56.2 72 45.8
Solyc02g076800.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 1.4e-06 56.2 66 50.0
Atru.chr10.1660 Acer truncatum HOM05D001767 ORTHO05D001714 1.8e-06 55.8 66 51.5
Atru.chr10.1661 Acer truncatum HOM05D001767 ORTHO05D001714 1.8e-06 55.8 66 51.5
Aqoxy4G00332 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 1.8e-06 55.8 62 50.0
Manes.16G040300 Manihot esculenta HOM05D001767 ORTHO05D001714 1.8e-06 55.8 65 50.8
Sc17g0005730 Simmondsia chinensis HOM05D001767 ORTHO05D001714 1.8e-06 55.8 71 45.1
DCAR_005215 Daucus carota HOM05D001767 ORTHO05D001714 2.3e-06 55.5 72 43.1
Medtr2g016150 Medicago truncatula HOM05D001767 ORTHO05D001714 2.3e-06 55.5 62 51.6
Lj6g0023027 Lotus japonicus HOM05D001767 ORTHO05D001714 3.0e-06 55.1 60 53.3
Lalb_Chr12g0205111 Lupinus albus HOM05D001767 ORTHO05D001714 3.0e-06 55.1 65 49.2
TAR452G0002 Trochodendron aralioides HOM05D001767 ORTHO05D001714 4.0e-06 54.7 64 51.6
Aqoxy1G02057 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 5.2e-06 54.3 64 53.1
GSVIVG01021218001 Vitis vinifera HOM05D001767 ORTHO05D001714 5.2e-06 54.3 69 46.4
arahy.Tifrunner.gnm1.ann1.YN8ZSQ Arachis hypogaea HOM05D001167 ORTHO05D021503 6.8e-06 53.9 38 65.8
Hma1.2p1_0333F.1_g128060 Hydrangea macrophylla HOM05D001767 ORTHO05D001714 6.8e-06 53.9 72 43.1
Oeu039918.1 Olea europaea HOM05D001767 ORTHO05D001714 6.8e-06 53.9 72 45.8
HanXRQChr16g0518651 Helianthus annuus HOM05D001767 ORTHO05D001714 8.8e-06 53.5 64 48.4
Oeu034631.1 Olea europaea HOM05D001767 ORTHO05D001714 8.8e-06 53.5 73 45.2
PGR042G0320 Punica granatum HOM05D001767 ORTHO05D001714 8.8e-06 53.5 62 50.0
unitig_578.g16452 Utricularia gibba HOM05D001767 ORTHO05D001714 8.8e-06 53.5 67 44.8


User provided reference genes

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