Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YKEN36 Arachis hypogaea HOM05D002602 ORTHO05D002661 1.8e-180 636.0 355 100.0
arahy.Tifrunner.gnm1.ann1.MXVN5B Arachis hypogaea HOM05D002602 ORTHO05D002661 1.4e-145 520.0 350 88.6
arahy.Tifrunner.gnm1.ann1.PKVI3C Arachis hypogaea HOM05D003720 ORTHO05D002661 2.2e-138 496.1 346 85.5
arahy.Tifrunner.gnm1.ann1.V5A5TZ Arachis hypogaea HOM05D002602 ORTHO05D002661 7.1e-113 411.4 343 77.3
arahy.Tifrunner.gnm1.ann1.1EE9E0 Arachis hypogaea HOM05D002602 ORTHO05D002661 1.1e-92 344.4 322 73.0
arahy.Tifrunner.gnm1.ann1.SM9D0V Arachis hypogaea HOM05D002602 ORTHO05D002661 2.0e-86 323.6 202 92.6
arahy.Tifrunner.gnm1.ann1.H7M7QR Arachis hypogaea HOM05D002602 ORTHO05D002661 1.8e-84 317.0 225 81.3
arahy.Tifrunner.gnm1.ann1.36S5A5 Arachis hypogaea HOM05D002602 ORTHO05D002661 4.1e-84 315.8 209 90.4
arahy.Tifrunner.gnm1.ann1.BYLA1M Arachis hypogaea HOM05D002602 ORTHO05D002661 3.4e-70 269.6 352 58.0
arahy.Tifrunner.gnm1.ann1.293L9L Arachis hypogaea HOM05D002602 ORTHO05D002661 8.3e-45 185.3 177 76.3
arahy.Tifrunner.gnm1.ann1.8T4WXA Arachis hypogaea HOM05D002602 ORTHO05D002661 1.6e-43 181.0 176 75.6
arahy.Tifrunner.gnm1.ann1.0ZCW7G Arachis hypogaea HOM05D001228 ORTHO05D003869 6.0e-35 152.5 98 93.9
arahy.Tifrunner.gnm1.ann1.N787F7 Arachis hypogaea HOM05D002602 ORTHO05D002661 5.2e-31 139.4 106 83.0
Lalb_Chr12g0197611 Lupinus albus HOM05D002602 ORTHO05D002661 4.2e-28 129.8 321 43.0
Lalb_Chr13g0302291 Lupinus albus HOM05D002602 ORTHO05D002661 4.2e-28 129.8 320 43.1
arahy.Tifrunner.gnm1.ann1.K5A3DB Arachis hypogaea HOM05D002602 ORTHO05D002661 1.3e-26 124.8 315 45.7
Lalb_Chr07g0178641 Lupinus albus HOM05D002602 ORTHO05D002661 2.3e-26 124.0 174 59.8
arahy.Tifrunner.gnm1.ann1.1P1QHD Arachis hypogaea HOM05D002602 ORTHO05D002661 3.0e-26 123.6 124 72.6
arahy.Tifrunner.gnm1.ann1.2N625L Arachis hypogaea HOM05D002602 ORTHO05D002661 3.9e-26 123.2 317 44.2
arahy.Tifrunner.gnm1.ann1.43249I Arachis hypogaea HOM05D002602 ORTHO05D002661 6.6e-26 122.5 315 45.1
arahy.Tifrunner.gnm1.ann1.V836PL Arachis hypogaea HOM05D002602 ORTHO05D002661 3.6e-24 116.7 70 95.7
Glyma.17G120600 Glycine max HOM05D002602 ORTHO05D002661 5.8e-22 109.4 317 41.0
Prupe.7G226700 Prunus persica HOM05D002602 ORTHO05D002661 1.1e-20 105.1 313 41.5
Dinv36599 Davidia involucrata HOM05D002602 ORTHO05D002661 1.9e-20 104.4 151 59.6
GSVIVG01035728001 Vitis vinifera HOM05D002602 ORTHO05D002661 2.4e-20 104.0 324 38.0
TWI32G1161 Tripterygium wilfordii HOM05D002602 ORTHO05D002661 3.2e-20 103.6 311 35.0
Phvul.003G176400 Phaseolus vulgaris HOM05D002602 ORTHO05D002661 7.1e-20 102.4 319 41.7
VMungo1215G0338 Vigna mungo HOM05D002602 ORTHO05D002661 1.2e-19 101.7 312 40.1
Glyma.05G012500 Glycine max HOM05D002602 ORTHO05D002661 2.1e-19 100.9 315 40.0
Dinv41572 Davidia involucrata HOM05D002602 ORTHO05D002661 2.7e-19 100.5 319 38.9
TAR636G3129 Trochodendron aralioides HOM05D002602 ORTHO05D002661 3.5e-19 100.1 327 36.7
Actinidia09399 Actinidia chinensis HOM05D002602 ORTHO05D002661 4.6e-19 99.8 317 40.4
Duzib168G1527 Durio zibethinus HOM05D002602 ORTHO05D002661 4.6e-19 99.8 310 36.8
Lj1g0001915 Lotus japonicus HOM05D002602 ORTHO05D002661 6.6e-18 95.9 166 53.6
CSS0048428 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 8.7e-18 95.5 317 39.7
QL02p086204 Quercus lobata HOM05D002602 ORTHO05D002661 8.7e-18 95.5 313 40.9
MD02G1062600 Malus domestica HOM05D002602 ORTHO05D002661 1.5e-17 94.7 313 39.3
TAR383G0480 Trochodendron aralioides HOM05D002602 ORTHO05D002661 3.3e-17 93.6 317 38.8
MD15G1190400 Malus domestica HOM05D002602 ORTHO05D002661 4.3e-17 93.2 316 39.6
Peaxi162Scf00256g00913 Petunia axillaris HOM05D002602 ORTHO05D002661 5.6e-17 92.8 171 52.0
FAN19G2525 Fragaria x ananassa HOM05D002602 ORTHO05D002661 7.3e-17 92.4 325 39.4
FAN27G2877 Fragaria x ananassa HOM05D002602 ORTHO05D002661 7.3e-17 92.4 316 37.0
FvH4_1g05450 Fragaria vesca HOM05D002602 ORTHO05D002661 1.6e-16 91.3 322 39.4
Actinidia20335 Actinidia chinensis HOM05D002602 ORTHO05D002661 2.1e-16 90.9 312 38.1
CiPaw.03G235600 Carya illinoinensis HOM05D002602 ORTHO05D002661 2.1e-16 90.9 312 39.4
Dinv35879 Davidia involucrata HOM05D002602 ORTHO05D002661 2.8e-16 90.5 327 37.3
Thecc.09G115500 Theobroma cacao HOM05D002602 ORTHO05D002661 1.1e-15 88.6 319 35.7
Thecc.09G115400 Theobroma cacao HOM05D002602 ORTHO05D002661 1.8e-15 87.8 315 35.9
TWI63G0040 Tripterygium wilfordii HOM05D002602 ORTHO05D002661 1.8e-15 87.8 309 36.9
TWI34G1255 Tripterygium wilfordii HOM05D002602 ORTHO05D002661 3.1e-15 87.0 323 37.5
Gorai.013G238300 Gossypium raimondii HOM05D002602 ORTHO05D002661 4.0e-15 86.7 174 50.0
TAR626G0862 Trochodendron aralioides HOM05D002602 ORTHO05D002661 6.9e-15 85.9 180 50.0
Gorai.001G003500 Gossypium raimondii HOM05D002602 ORTHO05D002661 9.0e-15 85.5 318 36.8
Gohir.D07G003800 Gossypium hirsutum HOM05D002602 ORTHO05D002661 1.2e-14 85.1 326 36.8
Rhsim03G0245200 Rhododendron simsii HOM05D002602 ORTHO05D002661 1.2e-14 85.1 318 39.9
CSS0041585 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 1.5e-14 84.7 320 39.1
Gohir.D13G209200 Gossypium hirsutum HOM05D002602 ORTHO05D002661 2.0e-14 84.3 161 51.6
FAN20G3150 Fragaria x ananassa HOM05D002602 ORTHO05D002661 2.6e-14 84.0 312 36.9
Lj7A711G44 Lonicera japonica HOM05D002602 ORTHO05D002661 5.8e-14 82.8 186 43.5
vmacro06191 Vaccinium macrocarpon HOM05D002602 ORTHO05D002661 5.8e-14 82.8 315 38.1
TAR624G0315 Trochodendron aralioides HOM05D002602 ORTHO05D002661 7.6e-14 82.4 149 50.3
Dinv30216 Davidia involucrata HOM05D002602 ORTHO05D002661 1.3e-13 81.6 321 37.1
CSS0035831 Camellia sinensis var. sinensis HOM05D002602 ORTHO05D002661 1.7e-13 81.3 316 37.0
RcHm_v2.0_Chr2g0091121 Rosa chinensis HOM05D002602 ORTHO05D002661 2.2e-13 80.9 320 36.6
FvH4_2g30190 Fragaria vesca HOM05D002602 ORTHO05D002661 3.8e-13 80.1 312 37.2
Oeu045175.1 Olea europaea HOM05D002602 ORTHO05D002661 1.4e-12 78.2 169 47.9
CANSAT56G2101 Cannabis sativa HOM05D002602 ORTHO05D002661 4.2e-12 76.6 312 35.3
Gohir.A07G003400 Gossypium hirsutum HOM05D002602 ORTHO05D002661 4.2e-12 76.6 320 35.6
RcHm_v2.0_Chr6g0312721 Rosa chinensis HOM05D002602 ORTHO05D002661 4.2e-12 76.6 317 36.6
Ciclev10008958m.g Citrus clementina HOM05D002602 ORTHO05D002661 9.3e-12 75.5 169 50.3
Cpa.g.sc23.148 Carica papaya HOM05D002602 ORTHO05D002661 1.2e-11 75.1 319 35.4
Nn2g11832 Nelumbo nucifera HOM05D002602 ORTHO05D002661 1.2e-11 75.1 232 34.9
Duzib150G1692 Durio zibethinus HOM05D002602 ORTHO05D002661 1.6e-11 74.7 317 37.9
Sabra18G0035600 Salix brachista HOM05D002602 ORTHO05D002661 1.6e-11 74.7 321 34.3
GSVIVG01015438001 Vitis vinifera HOM05D002602 ORTHO05D002661 2.1e-11 74.3 179 46.9
Duzib150G1573 Durio zibethinus HOM05D002602 ORTHO05D002661 6.0e-11 72.8 313 36.4
Aqoxy7G01832 Aquilegia oxysepala HOM05D002602 ORTHO05D002661 7.9e-11 72.4 171 41.5
Solyc05g018490.3 Solanum lycopersicum HOM05D002602 ORTHO05D002661 1.0e-10 72.0 318 33.6
PGR031G2332 Punica granatum HOM05D002602 ORTHO05D002661 1.3e-10 71.6 317 34.4
Atru.chr7.1291 Acer truncatum HOM05D002602 ORTHO05D002661 1.8e-10 71.2 312 38.8
Duzib168G0558 Durio zibethinus HOM05D002602 ORTHO05D002661 1.8e-10 71.2 314 37.3
MD15G1114900 Malus domestica HOM05D002602 ORTHO05D002661 1.8e-10 71.2 320 34.4
EL10Ac2g02533 Beta vulgaris HOM05D002602 ORTHO05D002661 3.0e-10 70.5 331 35.3
FAN23G0655 Fragaria x ananassa HOM05D002602 ORTHO05D002661 3.0e-10 70.5 134 53.0
FAN28G2603 Fragaria x ananassa HOM05D002602 ORTHO05D002661 3.9e-10 70.1 335 33.7
Gohir.A08G237200 Gossypium hirsutum HOM05D002602 ORTHO05D002661 3.9e-10 70.1 316 34.2
Gohir.D05G011600 Gossypium hirsutum HOM05D002602 ORTHO05D002661 3.9e-10 70.1 310 35.5
Gohir.A13G203900 Gossypium hirsutum HOM05D002602 ORTHO05D002661 6.7e-10 69.3 145 51.7
Prupe.1G466300 Prunus persica HOM05D002602 ORTHO05D002661 6.7e-10 69.3 315 35.2
Cc06_g09280 Coffea canephora HOM05D002602 ORTHO05D002661 8.7e-10 68.9 182 42.3
Hund03001 Selenicereus undatus HOM05D002602 ORTHO05D002661 8.7e-10 68.9 321 34.6
Duzib187G0766 Durio zibethinus HOM05D002602 ORTHO05D002661 1.5e-09 68.2 157 44.6
Peaxi162Scf00552g00311 Petunia axillaris HOM05D002602 ORTHO05D002661 1.9e-09 67.8 310 32.9
CiPaw.08G015900 Carya illinoinensis HOM05D002602 ORTHO05D002661 2.5e-09 67.4 324 34.9
Gorai.009G011900 Gossypium raimondii HOM05D002602 ORTHO05D002661 2.5e-09 67.4 310 34.5
Potri.006G246300 Populus trichocarpa HOM05D002602 ORTHO05D002661 3.3e-09 67.0 311 36.0
FAN26G0699 Fragaria x ananassa HOM05D002602 ORTHO05D002661 4.3e-09 66.6 323 33.7
HanXRQChr12g0355871 Helianthus annuus HOM05D002602 ORTHO05D002661 7.4e-09 65.9 147 44.2
Sopen08g021800 Solanum pennellii HOM05D002602 ORTHO05D002661 7.4e-09 65.9 315 31.4
FAN26G2978 Fragaria x ananassa HOM05D002602 ORTHO05D002661 9.6e-09 65.5 323 33.7
Potri.018G034800 Populus trichocarpa HOM05D002602 ORTHO05D002661 9.6e-09 65.5 147 48.3
Nitab4.5_0000066g0030 Nicotiana tabacum HOM05D002602 ORTHO05D002661 1.3e-08 65.1 321 35.2
Gohir.D08G257800 Gossypium hirsutum HOM05D002602 ORTHO05D002661 2.1e-08 64.3 172 44.8
PGR044G2133 Punica granatum HOM05D002602 ORTHO05D002661 2.1e-08 64.3 146 46.6
Gorai.004G274800 Gossypium raimondii HOM05D002602 ORTHO05D002661 3.7e-08 63.5 170 41.8
Sopen05g015460 Solanum pennellii HOM05D002602 ORTHO05D002661 3.7e-08 63.5 316 32.6
Migut.E01502 Erythranthe guttata HOM05D002602 ORTHO05D002661 6.2e-08 62.8 308 33.8
Eucgr.L02512 Eucalyptus grandis HOM05D002602 ORTHO05D002661 6.2e-08 62.8 171 44.4
Psat5g026800 Pisum sativum HOM05D002602 ORTHO05D002661 1.1e-07 62.0 325 32.6
Eucgr.C02860 Eucalyptus grandis HOM05D002602 ORTHO05D002661 1.8e-07 61.2 144 47.9
CAN.G21.20 Capsicum annuum HOM05D002602 ORTHO05D002661 2.4e-07 60.8 146 46.6
CiPaw.07G217400 Carya illinoinensis HOM05D002602 ORTHO05D002661 3.1e-07 60.5 326 33.7
DCAR_023980 Daucus carota HOM05D002602 ORTHO05D002661 3.1e-07 60.5 313 32.9
Hma1.2p1_0175F.1_g077310 Hydrangea macrophylla HOM05D002602 ORTHO05D002661 3.1e-07 60.5 328 32.3
Ah.12g063250 Amaranthus hybridus HOM05D002602 ORTHO05D002661 5.3e-07 59.7 169 40.2
Glyma.06G073800 Glycine max HOM05D002602 ORTHO05D002661 5.3e-07 59.7 319 34.8
ECA240G4826 Erigeron canadensis HOM05D002602 ORTHO05D002661 6.9e-07 59.3 138 49.3
Oeu010201.1 Olea europaea HOM05D002602 ORTHO05D002661 9.0e-07 58.9 172 43.6
SGA_v2.0_scaffold163G38094 Striga asiatica HOM05D002250 ORTHO05D002393 1.5e-06 58.2 322 32.0
Duzib187G1090 Durio zibethinus HOM05D002602 ORTHO05D002661 2.0e-06 57.8 169 40.2
PGSC0003DMG400027440 Solanum tuberosum HOM05D002602 ORTHO05D002661 2.6e-06 57.4 148 44.6
TPR.G34689 Trifolium pratense HOM05D002602 ORTHO05D002661 2.6e-06 57.4 134 45.5
CAN.G21.16 Capsicum annuum HOM05D002602 ORTHO05D002661 3.4e-06 57.0 185 38.9
Sed0014074 Sechium edule HOM05D002602 ORTHO05D002661 4.5e-06 56.6 327 31.5
Solyc08g150138.1 Solanum lycopersicum HOM05D002602 ORTHO05D002661 5.8e-06 56.2 172 38.4
PGSC0003DMG400014501 Solanum tuberosum HOM05D002602 ORTHO05D002661 5.8e-06 56.2 132 41.7
Zm00001eb122280 Zea mays HOM05D002602 ORTHO05D002661 5.8e-06 56.2 140 47.1
Actinidia14641 Actinidia chinensis HOM05D002250 ORTHO05D002393 7.6e-06 55.8 327 36.7
MSTRG.1648 Avicennia marina HOM05D002602 ORTHO05D002661 7.6e-06 55.8 322 32.9
Medtr3g108090 Medicago truncatula HOM05D002602 ORTHO05D002661 1.0e-05 55.5 139 43.2
SGA_v2.0_scaffold169G38633 Striga asiatica HOM05D002602 ORTHO05D002661 1.0e-05 55.5 332 33.1


User provided reference genes

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