Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea HOM05D000938 ORTHO05D001451 1.3e-61 239.6 126 100.0
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea HOM05D000938 ORTHO05D001451 3.4e-57 224.9 126 94.4
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea HOM05D000938 ORTHO05D001451 5.4e-55 217.6 127 92.1
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea HOM05D000938 ORTHO05D001451 1.7e-53 212.6 120 92.5
Lj4g0000059 Lotus japonicus HOM05D000938 ORTHO05D001451 4.3e-28 128.3 120 60.0
Lalb_Chr11g0068651 Lupinus albus HOM05D000938 ORTHO05D001451 2.8e-27 125.6 120 60.8
Ca_17622_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 1.1e-26 123.6 122 59.8
Glyma.04G209700 Glycine max HOM05D000938 ORTHO05D001451 2.4e-26 122.5 121 57.0
Phvul.009G154000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 6.8e-26 120.9 120 57.5
Phvul.002G274500 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 1.5e-25 119.8 120 54.2
Glyma.06G156300 Glycine max HOM05D000938 ORTHO05D001451 2.0e-25 119.4 122 57.4
Glyma.05G194350 Glycine max HOM05D000938 ORTHO05D001451 7.6e-25 117.5 120 54.2
Lalb_Chr07g0184261 Lupinus albus HOM05D000938 ORTHO05D001451 7.6e-25 117.5 123 56.9
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea HOM05D000938 ORTHO05D001451 8.4e-24 114.0 127 52.8
VMungo1309G0230 Vigna mungo HOM05D000938 ORTHO05D001451 4.2e-23 111.7 120 50.8
Medtr8g494200 Medicago truncatula HOM05D000938 ORTHO05D001451 1.6e-22 109.8 123 54.5
Medtr0095s0080 Medicago truncatula HOM05D000938 ORTHO05D001451 4.6e-22 108.2 122 54.1
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea HOM05D000938 ORTHO05D001451 6.0e-22 107.8 122 51.6
Glyma.08G002100 Glycine max HOM05D000938 ORTHO05D001451 6.0e-22 107.8 120 50.8
Psat7g045480 Pisum sativum HOM05D000938 ORTHO05D001451 6.0e-22 107.8 108 58.3
VMungo0251G2900 Vigna mungo HOM05D000938 ORTHO05D001451 3.9e-21 105.1 120 49.2
CiPaw.04G079100 Carya illinoinensis HOM05D000938 ORTHO05D001451 1.1e-20 103.6 118 52.5
CiPaw.03G117700 Carya illinoinensis HOM05D000938 ORTHO05D001451 1.5e-20 103.2 119 50.4
Cc02_g33890 Coffea canephora HOM05D000938 ORTHO05D001451 6.2e-19 97.8 117 48.7
Dinv12778 Davidia involucrata HOM05D000938 ORTHO05D001451 6.2e-19 97.8 117 50.4
Dinv29655 Davidia involucrata HOM05D000938 ORTHO05D001451 6.2e-19 97.8 120 51.7
Dinv36347 Davidia involucrata HOM05D000938 ORTHO05D001451 1.1e-18 97.1 120 51.7
QL10p041154 Quercus lobata HOM05D000938 ORTHO05D001451 1.4e-18 96.7 119 48.7
Sabra05G0056100 Salix brachista HOM05D000938 ORTHO05D001451 1.5e-17 93.2 119 46.2
Potri.005G068700 Populus trichocarpa HOM05D000938 ORTHO05D001451 2.0e-17 92.8 118 44.1
TWI75G1331 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 5.8e-17 91.3 117 43.6
TWI75G1557 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 1.3e-16 90.1 114 44.7
SGA_v2.0_scaffold273G46466 Striga asiatica HOM05D000938 ORTHO05D001451 6.4e-16 87.8 109 47.7
Sabra05G0056000 Salix brachista HOM05D000938 ORTHO05D001451 8.4e-16 87.4 119 43.7
vmacro12751 Vaccinium macrocarpon HOM05D000938 ORTHO05D001451 1.4e-15 86.7 122 44.3
Potri.007G100600 Populus trichocarpa HOM05D000938 ORTHO05D001451 7.1e-15 84.3 121 43.0
SGA_v2.0_scaffold54G19616 Striga asiatica HOM05D000938 ORTHO05D001451 1.6e-14 83.2 111 43.2
Sabra07G0083200 Salix brachista HOM05D000938 ORTHO05D001451 2.7e-14 82.4 121 41.3
SGA_v2.0_scaffold107G30767 Striga asiatica HOM05D000938 ORTHO05D001451 2.7e-14 82.4 105 46.7
Duzib187G1406 Durio zibethinus HOM05D000938 ORTHO05D001451 6.0e-14 81.3 115 40.0
PGR119G0365 Punica granatum HOM05D000938 ORTHO05D001451 7.9e-14 80.9 133 39.1
Rhsim10G0127000 Rhododendron simsii HOM05D000938 ORTHO05D001451 7.9e-14 80.9 118 44.9
Migut.H00821 Erythranthe guttata HOM05D000938 ORTHO05D001451 1.3e-13 80.1 112 42.0
CSS0009834 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 2.3e-13 79.3 115 47.8
Gohir.D04G033800 Gossypium hirsutum HOM05D000938 ORTHO05D001451 2.3e-13 79.3 114 40.4
Nn5g28429 Nelumbo nucifera HOM05D000938 ORTHO05D001451 2.3e-13 79.3 120 39.2
Gorai.012G038100 Gossypium raimondii HOM05D000938 ORTHO05D001451 3.0e-13 79.0 114 40.4
Manes.12G147100 Manihot esculenta HOM05D000938 ORTHO05D001451 6.6e-13 77.8 125 44.8
Gohir.A05G381500 Gossypium hirsutum HOM05D000938 ORTHO05D001451 8.7e-13 77.4 114 39.5
PGR119G1832 Punica granatum HOM05D000938 ORTHO05D001451 8.7e-13 77.4 137 38.0
Duzib264G1224 Durio zibethinus HOM05D000938 ORTHO05D001451 1.1e-12 77.0 114 37.7
COL.COLO4_12066 Corchorus olitorius HOM05D000938 ORTHO05D001451 5.6e-12 74.7 108 40.7
Cpa.g.sc37.13 Carica papaya HOM05D000938 ORTHO05D001451 7.4e-12 74.3 110 44.5
Lsat_1_v5_gn_5_82100 Lactuca sativa HOM05D000938 ORTHO05D001451 9.6e-12 73.9 127 37.0
FvH4_1g24940 Fragaria vesca HOM05D000938 ORTHO05D001451 2.1e-11 72.8 120 41.7
FAN19G2886 Fragaria x ananassa HOM05D000938 ORTHO05D001451 2.1e-11 72.8 120 41.7
Nn1g08978 Nelumbo nucifera HOM05D000938 ORTHO05D001451 2.1e-11 72.8 117 37.6
TPR.G37403 Trifolium pratense HOM05D000938 ORTHO05D001451 2.1e-11 72.8 106 41.5
HanXRQChr10g0309421 Helianthus annuus HOM05D000938 ORTHO05D001451 3.6e-11 72.0 128 39.1
FAN26G2282 Fragaria x ananassa HOM05D000938 ORTHO05D001451 4.8e-11 71.6 120 42.5
Solyc02g032850.3 Solanum lycopersicum HOM05D000938 ORTHO05D001451 4.8e-11 71.6 121 37.2
MD15G1136300 Malus domestica HOM05D000938 ORTHO05D001451 1.1e-10 70.5 129 44.2
Thecc.01G138600 Theobroma cacao HOM05D000938 ORTHO05D001451 1.1e-10 70.5 114 35.1
ECA234G2409 Erigeron canadensis HOM05D000938 ORTHO05D001451 1.4e-10 70.1 130 37.7
MSTRG.23491 Avicennia marina HOM05D000938 ORTHO05D001451 1.8e-10 69.7 111 41.4
SalBow7G1570 Salvia bowleyana HOM05D000938 ORTHO05D001451 2.4e-10 69.3 116 43.1
Prupe.4G276500 Prunus persica HOM05D000938 ORTHO05D001451 3.1e-10 68.9 129 38.0
Atru.chr4.1003 Acer truncatum HOM05D000938 ORTHO05D001451 6.9e-10 67.8 110 38.2
Migut.L00579 Erythranthe guttata HOM05D000938 ORTHO05D001451 6.9e-10 67.8 107 42.1
PGR102G2206 Punica granatum HOM05D000938 ORTHO05D001451 6.9e-10 67.8 124 41.9
TAR625G1159 Trochodendron aralioides HOM05D000938 ORTHO05D001451 6.9e-10 67.8 115 40.9
FAN23G2201 Fragaria x ananassa HOM05D000938 ORTHO05D001451 9.0e-10 67.4 120 40.8
Nitab4.5_0006396g0010 Nicotiana tabacum HOM05D000938 ORTHO05D001451 9.0e-10 67.4 118 38.1
Sopen02g011180 Solanum pennellii HOM05D000938 ORTHO05D001451 9.0e-10 67.4 117 38.5
TPR.G40677 Trifolium pratense HOM05D000938 ORTHO05D001451 1.2e-09 67.0 63 55.6
Manes.12G159500 Manihot esculenta HOM05D000938 ORTHO05D001451 2.0e-09 66.2 114 42.1
PGSC0003DMG400019873 Solanum tuberosum HOM05D000938 ORTHO05D001451 3.4e-09 65.5 118 38.1
Sed0022724 Sechium edule HOM05D000938 ORTHO05D001451 4.5e-09 65.1 110 37.3
CANSAT01G1052 Cannabis sativa HOM05D000938 ORTHO05D001451 7.6e-09 64.3 122 36.1
Sc09g0002220 Simmondsia chinensis HOM05D000938 ORTHO05D001451 7.6e-09 64.3 127 37.8
Actinidia06582 Actinidia chinensis HOM05D000938 ORTHO05D001451 1.3e-08 63.5 120 40.8
Migut.L00277 Erythranthe guttata HOM05D000938 ORTHO05D001451 1.3e-08 63.5 112 41.1
ClCG04G001930 Citrullus lanatus HOM05D000938 ORTHO05D001451 1.7e-08 63.2 108 41.7
GSVIVG01022328001 Vitis vinifera HOM05D000938 ORTHO05D001451 3.8e-08 62.0 122 37.7
Thecc.01G138400 Theobroma cacao HOM05D000938 ORTHO05D001451 1.1e-07 60.5 108 35.2
THA.LOC104804461 Tarenaya hassleriana HOM05D000938 ORTHO05D001451 1.9e-07 59.7 121 38.0
Aqoxy6G00324 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 5.5e-07 58.2 127 36.2
Ciclev10000576m.g Citrus clementina HOM05D000938 ORTHO05D001451 9.3e-07 57.4 118 40.7
Ah.06g191090 Amaranthus hybridus HOM05D000938 ORTHO05D001451 1.2e-06 57.0 108 33.3
DCAR_019991 Daucus carota HOM05D000938 ORTHO05D001451 1.2e-06 57.0 120 35.0
EL10Ac4g09634 Beta vulgaris HOM05D000938 ORTHO05D001451 7.9e-06 54.3 103 33.0


User provided reference genes

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