Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 3.8e-271 937.6 470 100.0
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 1.4e-265 919.1 471 98.5
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 2.5e-222 775.4 464 83.0
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 3.3e-222 775.0 463 83.2
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 1.8e-220 769.2 460 82.6
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 8.3e-218 760.4 441 84.1
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 2.4e-217 758.8 455 82.4
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 1.2e-216 756.5 445 84.5
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 2.0e-216 755.7 459 81.5
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 6.0e-216 754.2 461 81.3
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 1.0e-215 753.4 460 82.0
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 3.9e-215 751.5 463 81.0
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 4.4e-211 738.0 440 81.1
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 1.4e-209 733.0 451 81.4
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 6.6e-199 697.6 463 74.9
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 8.6e-199 697.2 454 76.7
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.5e-198 696.4 429 78.1
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 1.9e-198 696.0 442 76.2
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 2.5e-198 695.7 449 75.9
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 4.3e-198 694.9 454 75.3
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 5.6e-198 694.5 442 76.0
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 2.1e-197 692.6 462 74.7
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 2.8e-197 692.2 440 77.0
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 2.8e-197 692.2 459 75.4
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 3.6e-197 691.8 442 75.8
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 3.6e-197 691.8 454 76.7
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 6.2e-197 691.0 449 75.3
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 1.1e-196 690.3 462 74.2
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 1.4e-196 689.9 469 72.7
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.4e-196 689.1 460 75.0
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.4e-196 689.1 460 75.0
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 5.2e-196 688.0 429 77.2
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 8.9e-196 687.2 463 73.4
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.5e-195 686.4 439 76.1
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 2.6e-195 685.6 464 74.8
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 2.6e-195 685.6 439 75.4
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 3.4e-195 685.3 460 74.3
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 3.4e-195 685.3 460 74.3
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 7.6e-195 684.1 468 72.2
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 2.2e-194 682.6 459 74.7
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 2.2e-194 682.6 448 75.4
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 2.2e-194 682.6 456 74.3
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 4.9e-194 681.4 457 73.5
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 4.9e-194 681.4 454 75.3
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 4.9e-194 681.4 449 74.6
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 8.4e-194 680.6 451 74.1
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.4e-193 679.9 469 72.7
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 1.9e-193 679.5 459 74.9
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 2.4e-193 679.1 447 76.1
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.2e-193 678.7 448 74.3
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 5.4e-193 677.9 464 73.1
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 7.1e-193 677.6 466 71.5
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 9.2e-193 677.2 439 75.4
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 1.6e-192 676.4 439 75.2
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.6e-192 676.4 460 74.3
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 2.7e-192 675.6 436 74.5
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 4.6e-192 674.9 449 74.2
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 6.0e-192 674.5 461 72.9
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 6.0e-192 674.5 457 72.6
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 7.8e-192 674.1 455 73.2
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.0e-191 673.7 466 71.5
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.0e-191 673.7 472 71.8
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.0e-191 673.7 472 71.8
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 1.7e-191 672.9 439 75.9
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 1.7e-191 672.9 447 76.3
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.7e-191 672.9 439 74.0
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 5.1e-191 671.4 440 74.8
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 5.1e-191 671.4 488 69.9
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 6.6e-191 671.0 456 73.5
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 1.1e-190 670.2 457 72.6
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 1.1e-190 670.2 446 74.0
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 1.1e-190 670.2 457 72.0
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 1.9e-190 669.5 433 75.1
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 1.9e-190 669.5 470 71.1
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 1.9e-190 669.5 448 72.5
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 3.3e-190 668.7 432 75.2
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 3.3e-190 668.7 444 74.1
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 4.3e-190 668.3 462 72.7
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 4.3e-190 668.3 448 74.8
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 7.3e-190 667.5 462 71.4
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.1e-189 666.0 459 72.5
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 2.8e-189 665.6 458 71.2
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 4.0e-188 661.8 449 71.9
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 6.9e-188 661.0 452 72.8
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 6.9e-188 661.0 474 70.9
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 1.2e-187 660.2 468 69.7
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.2e-187 660.2 467 70.4
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 1.5e-187 659.8 470 70.4
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 2.6e-187 659.1 433 73.9
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 3.4e-187 658.7 468 70.3
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 4.4e-187 658.3 430 74.0
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 7.6e-187 657.5 464 71.1
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 9.9e-187 657.1 463 70.4
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 2.9e-186 655.6 444 73.4
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 4.9e-186 654.8 464 70.9
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 1.1e-185 653.7 467 71.5
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.4e-185 653.3 426 73.9
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 7.1e-185 651.0 444 72.1
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 1.2e-184 650.2 470 71.3
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 4.6e-184 648.3 446 72.2
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 4.6e-184 648.3 451 70.5
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 6.0e-184 647.9 466 70.6
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 6.0e-184 647.9 431 71.7
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 2.3e-183 646.0 439 72.0
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.5e-182 642.5 466 67.2
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 4.3e-182 641.7 441 72.3
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.6e-181 639.8 442 70.1
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 4.8e-181 638.3 462 69.0
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 2.6e-179 632.5 443 70.0
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.7e-178 629.8 449 69.0
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 4.9e-178 628.2 442 69.9
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.1e-176 622.9 421 73.9
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.9e-175 618.6 411 73.5
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 5.1e-175 618.2 443 67.7
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 1.1e-174 617.1 443 68.2
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 5.6e-174 614.8 447 67.6
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 1.6e-173 613.2 430 68.8
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 2.1e-173 612.8 428 69.4
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 2.1e-173 612.8 428 69.4
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 1.8e-172 609.8 430 68.4
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 2.4e-172 609.4 431 69.1
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 2.4e-172 609.4 425 68.7
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 3.1e-172 609.0 431 69.1
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 5.3e-172 608.2 425 69.4
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 5.3e-172 608.2 431 69.8
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 6.9e-172 607.8 469 64.8
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 9.0e-172 607.4 425 69.4
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 3.4e-171 605.5 402 73.4
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 9.9e-171 604.0 444 66.7
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.3e-170 603.6 412 72.1
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.4e-169 600.1 429 68.8
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 3.2e-169 599.0 436 67.2
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.8e-167 593.2 449 67.0
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 2.3e-167 592.8 385 74.8
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 3.0e-167 592.4 464 65.5
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 3.0e-167 592.4 449 63.3
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 2.4e-164 582.8 387 73.4
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 3.1e-164 582.4 365 76.7
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 1.7e-162 576.6 382 72.8
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.7e-160 569.3 448 65.0
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 3.5e-160 568.9 387 72.1
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 3.3e-158 562.4 381 71.9
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 5.0e-154 548.5 385 72.2
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.0e-146 524.2 463 60.5
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.7e-141 506.9 433 59.8
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 8.0e-136 488.0 447 57.5
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.1e-134 484.2 432 56.2
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 2.0e-131 473.4 420 58.3
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 1.2e-128 464.2 465 53.5
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 8.8e-127 458.0 419 55.4
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 1.7e-122 443.7 327 64.5
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 3.1e-116 422.9 231 86.6
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 2.9e-106 389.8 284 66.5
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 1.1e-105 387.9 236 78.0
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 6.1e-104 382.1 444 46.8
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.9e-97 360.5 271 64.9
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 1.2e-96 357.8 449 43.7
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 9.8e-94 348.2 436 45.4
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 6.2e-88 328.9 383 45.7
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 3.9e-74 283.1 272 59.6
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 2.7e-67 260.4 158 79.1
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 7.9e-51 205.7 151 69.5
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 6.5e-45 186.0 113 77.0
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.0e-38 164.5 126 62.7
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.3e-37 161.8 90 83.3
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 1.4e-36 158.3 438 30.1
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 5.3e-31 139.8 452 28.3
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 6.3e-24 116.3 85 63.5
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 3.5e-22 110.5 84 63.1
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 4.0e-18 97.1 86 61.6
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 5.5e-12 76.6 61 62.3
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 1.8e-07 61.6 219 26.0
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 9.1e-07 59.3 58 55.2
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 2.0e-06 58.2 58 53.4
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 5.9e-06 56.6 211 28.4


User provided reference genes

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