Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YH938E Arachis hypogaea HOM05D006294 ORTHO05D007668 2.4e-56 221.9 108 100.0
arahy.Tifrunner.gnm1.ann1.DS4D2V Arachis hypogaea HOM05D006294 ORTHO05D007668 1.3e-33 146.4 117 66.7
arahy.Tifrunner.gnm1.ann1.DZVX1N Arachis hypogaea HOM05D006294 ORTHO05D007668 1.3e-33 146.4 117 66.7
arahy.Tifrunner.gnm1.ann1.DT0J5B Arachis hypogaea HOM05D006294 ORTHO05D007668 1.2e-31 139.8 117 64.1
arahy.Tifrunner.gnm1.ann1.SDBD8X Arachis hypogaea HOM05D006294 ORTHO05D007668 3.0e-30 135.2 116 62.9
arahy.Tifrunner.gnm1.ann1.A4L1LT Arachis hypogaea HOM05D006294 ORTHO05D007668 6.3e-28 127.5 98 66.3
arahy.Tifrunner.gnm1.ann1.ED6YY1 Arachis hypogaea HOM05D006294 ORTHO05D007668 1.3e-25 119.8 100 64.0
arahy.Tifrunner.gnm1.ann1.5K47IW Arachis hypogaea HOM05D006294 ORTHO05D001225 2.9e-25 118.6 105 60.0
Lalb_Chr06g0163771 Lupinus albus HOM05D006294 ORTHO05D007668 7.2e-24 114.0 114 52.6
arahy.Tifrunner.gnm1.ann1.0NBS6K Arachis hypogaea HOM05D006294 ORTHO05D007668 4.7e-23 111.3 94 63.8
arahy.Tifrunner.gnm1.ann1.27KW97 Arachis hypogaea HOM05D006294 ORTHO05D007668 4.7e-23 111.3 94 63.8
Lj5g0013499 Lotus japonicus HOM05D006294 ORTHO05D007668 9.7e-21 103.6 114 53.5
CiPaw.06G119700 Carya illinoinensis HOM05D006294 ORTHO05D007668 2.8e-20 102.1 105 49.5
arahy.Tifrunner.gnm1.ann1.PQ7N7P Arachis hypogaea HOM05D006294 ORTHO05D007668 4.8e-20 101.3 104 57.7
QL11p052544 Quercus lobata HOM05D006294 ORTHO05D007668 4.8e-20 101.3 105 47.6
arahy.Tifrunner.gnm1.ann1.VQM2ML Arachis hypogaea HOM05D006294 ORTHO05D007668 4.1e-19 98.2 87 62.1
Glyma.20G105600 Glycine max HOM05D006294 ORTHO05D007668 4.1e-19 98.2 105 48.6
VMungo0720G0114 Vigna mungo HOM05D006294 ORTHO05D007668 1.2e-18 96.7 105 49.5
MD10G1129400 Malus domestica HOM05D006294 ORTHO05D007668 1.5e-18 96.3 102 51.0
CANSAT25G0635 Cannabis sativa HOM05D006294 ORTHO05D007668 2.6e-18 95.5 113 46.9
RcHm_v2.0_Chr6g0279111 Rosa chinensis HOM05D006294 ORTHO05D007668 4.5e-18 94.7 105 48.6
Medtr1g113720 Medicago truncatula HOM05D006294 ORTHO05D007668 1.0e-17 93.6 121 43.8
Prupe.8G170200 Prunus persica HOM05D006294 ORTHO05D007668 2.9e-17 92.0 105 48.6
TPR.G2447 Trifolium pratense HOM05D006294 ORTHO05D007668 3.8e-17 91.7 105 47.6
Cfa005297 Carpinus fangiana HOM05D006294 ORTHO05D007668 8.5e-17 90.5 105 43.8
arahy.Tifrunner.gnm1.ann1.L9KWYC Arachis hypogaea HOM05D006294 ORTHO05D007668 1.1e-16 90.1 64 68.8
TPR.G2441 Trifolium pratense HOM05D006294 ORTHO05D007668 1.1e-16 90.1 105 46.7
Phvul.007G017200 Phaseolus vulgaris HOM05D006294 ORTHO05D007668 1.4e-16 89.7 105 45.7
arahy.Tifrunner.gnm1.ann1.D2HFCL Arachis hypogaea HOM05D006294 ORTHO05D007668 2.5e-16 89.0 94 55.3
CSS0011609 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 2.5e-16 89.0 113 45.1
CSS0032021 Camellia sinensis var. sinensis HOM05D006294 ORTHO05D007668 2.5e-16 89.0 113 45.1
Haze_02090 Corylus avellana HOM05D006294 ORTHO05D007668 2.5e-16 89.0 105 42.9
vmacro02296 Vaccinium macrocarpon HOM05D006294 ORTHO05D007668 7.2e-16 87.4 107 43.9
Atru.BG.70.p Acer truncatum HOM05D006294 ORTHO05D007668 9.4e-16 87.0 105 44.8
FAN27G0563 Fragaria x ananassa HOM05D006294 ORTHO05D007668 9.4e-16 87.0 105 45.7
FAN20G2719 Fragaria x ananassa HOM05D006294 ORTHO05D007668 1.2e-15 86.7 105 45.7
Rhsim11G0194300 Rhododendron simsii HOM05D006294 ORTHO05D007668 4.7e-15 84.7 105 43.8
FAN24G2955 Fragaria x ananassa HOM05D006294 ORTHO05D007668 6.1e-15 84.3 105 45.7
Actinidia18031 Actinidia chinensis HOM05D006294 ORTHO05D007668 8.0e-15 84.0 105 43.8
FvH4_2g15760 Fragaria vesca HOM05D006294 ORTHO05D007668 8.0e-15 84.0 105 44.8
PGR142G2258 Punica granatum HOM05D006294 ORTHO05D007668 1.0e-14 83.6 105 38.1
Ciclev10028424m.g Citrus clementina HOM05D006294 ORTHO05D007668 2.3e-14 82.4 105 41.0
FAN15G3675 Fragaria x ananassa HOM05D006294 ORTHO05D007668 3.0e-14 82.0 105 44.8
Thecc.02G053600 Theobroma cacao HOM05D006294 ORTHO05D007668 3.9e-14 81.6 105 40.0
Manes.04G070000 Manihot esculenta HOM05D006294 ORTHO05D007668 6.7e-14 80.9 113 40.7
COL.COLO4_18015 Corchorus olitorius HOM05D006294 ORTHO05D007668 8.8e-14 80.5 113 38.9
Hma1.2p1_0032F.1_g019100 Hydrangea macrophylla HOM05D006294 ORTHO05D007668 2.0e-13 79.3 110 38.2
Aa31LG8G14230 Aethionema arabicum HOM05D006294 ORTHO05D007668 3.3e-13 78.6 105 39.0
Dinv41907 Davidia involucrata HOM05D006294 ORTHO05D007668 5.7e-13 77.8 105 41.0
Sed0001766 Sechium edule HOM05D006294 ORTHO05D007668 1.3e-12 76.6 105 40.0
TWI79G1609 Tripterygium wilfordii HOM05D006294 ORTHO05D007668 2.2e-12 75.9 105 38.1
Potri.009G139300 Populus trichocarpa HOM05D006294 ORTHO05D007668 3.7e-12 75.1 107 36.4
Sabra09G0107900 Salix brachista HOM05D006294 ORTHO05D007668 4.8e-12 74.7 107 37.4
Lj5A175T99 Lonicera japonica HOM05D006294 ORTHO05D007668 8.2e-12 73.9 105 39.0
MELO3C022147.2 Cucumis melo HOM05D006294 ORTHO05D007668 1.1e-11 73.6 105 41.0
CsaV3_5G039720 Cucumis sativus L. HOM05D006294 ORTHO05D007668 1.1e-11 73.6 105 41.0
Sp3g30330 Schrenkiella parvula HOM05D006294 ORTHO05D007668 1.8e-11 72.8 105 37.1
GSVIVG01023965001 Vitis vinifera HOM05D006294 ORTHO05D007668 2.4e-11 72.4 105 38.1
Thhalv10022675m.g Eutrema salsugineum HOM05D006294 ORTHO05D007668 7.0e-11 70.9 105 35.2
Gohir.D02G227800 Gossypium hirsutum HOM05D006294 ORTHO05D007668 9.1e-11 70.5 105 34.3
Gorai.005G255600 Gossypium raimondii HOM05D006294 ORTHO05D007668 9.1e-11 70.5 105 34.3
A03p46230 Brassica napus HOM05D006294 ORTHO05D007668 1.2e-10 70.1 103 36.9
BraA03t13747Z Brassica rapa HOM05D006294 ORTHO05D007668 1.2e-10 70.1 103 36.9
PSO541G2965 Papaver somniferum HOM05D006294 ORTHO05D007668 1.2e-10 70.1 104 37.5
ClCG02G011140 Citrullus lanatus HOM05D006294 ORTHO05D007668 1.6e-10 69.7 105 40.0
BcaB08g34688 Brassica carinata HOM05D006294 ORTHO05D007668 2.0e-10 69.3 105 36.2
BcaC01g02964 Brassica carinata HOM05D006294 ORTHO05D007668 2.0e-10 69.3 105 36.2
PSO675G2411 Papaver somniferum HOM05D006294 ORTHO05D007668 2.0e-10 69.3 103 35.0
C03p57830 Brassica napus HOM05D006294 ORTHO05D007668 2.6e-10 68.9 103 36.9
BolC3t18054H Brassica oleracea HOM05D006294 ORTHO05D007668 2.6e-10 68.9 103 36.9
Carub.0003s3096 Capsella rubella HOM05D006294 ORTHO05D007668 5.9e-10 67.8 103 36.9
Carub.0135s0001 Capsella rubella HOM05D006294 ORTHO05D007668 5.9e-10 67.8 103 36.9
THA.LOC104819661 Tarenaya hassleriana HOM05D006294 ORTHO05D007668 5.9e-10 67.8 103 35.9
AL3G49850 Arabidopsis lyrata HOM05D006294 ORTHO05D007668 7.7e-10 67.4 103 34.0
AT2G17033 Arabidopsis thaliana HOM05D006294 ORTHO05D007668 1.0e-09 67.0 103 35.0
Duzib052G0076 Durio zibethinus HOM05D006294 ORTHO05D007668 1.3e-09 66.6 102 36.3
Nn5g30865 Nelumbo nucifera HOM05D006294 ORTHO05D007668 1.3e-09 66.6 104 33.7
Ca_03291_v3 Cicer arietinum L. HOM05D006294 ORTHO05D007668 1.1e-08 63.5 69 50.7
MSTRG.19967 Avicennia marina HOM05D006294 ORTHO05D007668 1.5e-08 63.2 105 36.2
HanXRQChr10g0300361 Helianthus annuus HOM05D006294 ORTHO05D007668 1.5e-08 63.2 107 34.6
Cpa.g.sc20.124 Carica papaya HOM05D006294 ORTHO05D007668 1.9e-08 62.8 69 42.0
PGSC0003DMG400018933 Solanum tuberosum HOM05D006294 ORTHO05D007668 2.5e-08 62.4 116 33.6
Cc09_g10390 Coffea canephora HOM05D006294 ORTHO05D007668 3.2e-08 62.0 105 35.2
Sopen00g003210 Solanum pennellii HOM05D006294 ORTHO05D007668 4.2e-08 61.6 116 32.8
Ah.11g046440 Amaranthus hybridus HOM05D006294 ORTHO05D007668 5.5e-08 61.2 105 32.4
Solyc10g055700.2 Solanum lycopersicum HOM05D006294 ORTHO05D007668 7.2e-08 60.8 116 32.8
Nitab4.5_0028029g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 1.2e-07 60.1 116 32.8
CAN.G1.72 Capsicum annuum HOM05D006294 ORTHO05D007668 1.6e-07 59.7 116 31.9
Nitab4.5_0016084g0010 Nicotiana tabacum HOM05D006294 ORTHO05D007668 2.7e-07 58.9 105 34.3
Aqoxy6G01907 Aquilegia oxysepala HOM05D006294 ORTHO05D007668 4.7e-07 58.2 105 28.6
Oeu045089.1 Olea europaea HOM05D006294 ORTHO05D007668 6.1e-07 57.8 105 34.3
Migut.B00046 Erythranthe guttata HOM05D006294 ORTHO05D007668 1.0e-06 57.0 105 30.5
Eucgr.I01461 Eucalyptus grandis HOM05D006294 ORTHO05D007668 3.0e-06 55.5 105 31.4
arahy.Tifrunner.gnm1.ann1.VRB4HM Arachis hypogaea HOM05D006294 ORTHO05D007668 4.0e-06 55.1 36 77.8
Peaxi162Scf00042g01217 Petunia axillaris HOM05D006294 ORTHO05D007668 4.0e-06 55.1 116 30.2


User provided reference genes

Program Settings