Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.4e-75 285.4 144 100.0
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 2.5e-40 169.1 100 88.0
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-39 166.8 105 85.7
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 1.4e-38 163.3 94 90.4
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 8.9e-38 160.6 104 83.7
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 3.2e-35 152.1 94 84.0
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 5.8e-29 131.3 74 86.5
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 9.9e-29 130.6 95 70.5
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 3.8e-28 128.6 84 72.6
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 4.9e-28 128.3 97 63.9
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 6.4e-28 127.9 130 60.0
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 1.4e-27 126.7 69 89.9
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 1.4e-27 126.7 84 76.2
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 3.2e-27 125.6 84 75.0
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 3.2e-27 125.6 84 73.8
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 5.4e-27 124.8 94 64.9
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 5.4e-27 124.8 95 68.4
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 7.1e-27 124.4 95 68.4
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 7.1e-27 124.4 83 69.9
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 9.2e-27 124.0 97 62.9
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.6e-26 123.2 94 69.1
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-26 122.9 123 60.2
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 2.1e-26 122.9 94 69.1
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 2.1e-26 122.9 83 69.9
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 2.7e-26 122.5 80 82.5
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 2.7e-26 122.5 83 68.7
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 3.5e-26 122.1 83 71.1
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.0e-25 120.6 83 68.7
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 1.3e-25 120.2 83 67.5
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 1.7e-25 119.8 94 61.7
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 3.0e-25 119.0 83 65.1
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 3.9e-25 118.6 96 62.5
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 3.9e-25 118.6 83 67.5
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 6.6e-25 117.9 88 63.6
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 6.6e-25 117.9 94 64.9
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 8.7e-25 117.5 114 59.6
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 1.5e-24 116.7 94 63.8
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 1.5e-24 116.7 83 62.7
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 1.9e-24 116.3 83 66.3
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.9e-24 116.3 85 60.0
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 2.5e-24 115.9 83 66.3
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 2.5e-24 115.9 94 62.8
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 3.3e-24 115.5 83 66.3
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 4.3e-24 115.2 85 60.0
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 4.3e-24 115.2 83 68.7
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 4.3e-24 115.2 85 61.2
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.6e-24 114.8 85 58.8
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.6e-24 114.8 85 58.8
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 9.6e-24 114.0 83 66.3
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 1.2e-23 113.6 94 59.6
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.2e-23 113.6 85 58.8
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.6e-23 113.2 83 67.5
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.6e-23 113.2 94 61.7
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.1e-23 112.8 85 58.8
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.8e-23 112.5 83 62.7
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 4.7e-23 111.7 88 61.4
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 6.2e-23 111.3 94 59.6
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 6.2e-23 111.3 94 59.6
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 6.2e-23 111.3 83 63.9
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 6.2e-23 111.3 83 63.9
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 6.2e-23 111.3 83 63.9
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 6.2e-23 111.3 94 61.7
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 1.1e-22 110.5 94 62.8
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.4e-22 110.2 83 61.4
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.4e-22 110.2 84 61.9
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.4e-22 110.2 83 65.1
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 1.8e-22 109.8 83 59.0
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 1.8e-22 109.8 83 63.9
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 2.4e-22 109.4 83 62.7
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 3.1e-22 109.0 83 65.1
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 3.1e-22 109.0 83 65.1
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 3.1e-22 109.0 83 63.9
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 3.1e-22 109.0 83 60.2
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 3.1e-22 109.0 83 60.2
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 5.2e-22 108.2 95 60.0
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 6.9e-22 107.8 83 67.5
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 6.9e-22 107.8 83 62.7
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 6.9e-22 107.8 83 62.7
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 9.0e-22 107.5 83 67.5
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 9.0e-22 107.5 83 62.7
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 9.0e-22 107.5 83 61.4
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 9.0e-22 107.5 94 57.4
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.2e-21 107.1 83 61.4
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 1.2e-21 107.1 83 61.4
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-21 107.1 83 61.4
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-21 107.1 83 61.4
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 1.2e-21 107.1 83 61.4
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 1.2e-21 107.1 81 61.7
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.6e-21 105.9 83 61.4
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 3.4e-21 105.5 83 63.9
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 4.4e-21 105.1 94 57.4
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 5.8e-21 104.8 83 62.7
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 9.9e-21 104.0 97 55.7
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.7e-20 103.2 101 55.4
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.7e-20 103.2 94 53.2
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 2.2e-20 102.8 83 62.7
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 2.2e-20 102.8 83 60.2
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 2.9e-20 102.4 94 55.3
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 3.8e-20 102.1 83 59.0
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 8.4e-20 100.9 83 61.4
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 1.4e-19 100.1 83 56.6
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 1.4e-19 100.1 83 61.4
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 2.4e-19 99.4 84 53.6
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 3.2e-19 99.0 83 60.2
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 7.1e-19 97.8 83 59.0
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 9.3e-19 97.4 83 53.0
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.6e-18 96.7 83 59.0
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 7.8e-18 94.4 91 56.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 2.3e-17 92.8 86 52.3
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-17 91.3 76 56.6
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 3.1e-14 82.4 84 48.8
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 4.5e-13 78.6 48 70.8
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 9.9e-13 77.4 63 60.3
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 1.3e-12 77.0 81 48.1
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 1.6e-10 70.1 58 56.9
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 6.0e-10 68.2 88 42.0
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 6.0e-10 68.2 88 42.0
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 1.5e-08 63.5 59 52.5
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.9e-08 63.2 59 54.2
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 4.3e-08 62.0 109 37.6
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 3.7e-07 58.9 103 35.0


User provided reference genes

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