Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 1.2e-109 399.8 206 100.0
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 4.2e-105 384.8 206 96.6
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 4.2e-105 384.8 206 96.6
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 8.7e-103 377.1 206 94.7
arahy.Tifrunner.gnm1.ann1.Y76JQK Arachis hypogaea HOM05D004800 ORTHO05D005842 5.5e-65 251.5 196 73.5
arahy.Tifrunner.gnm1.ann1.RJ1WNK Arachis hypogaea HOM05D004800 ORTHO05D005842 8.8e-39 164.5 206 52.4
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 5.7e-38 161.8 207 47.8
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 9.8e-38 161.0 205 48.3
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.8e-37 159.5 205 45.4
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 3.7e-37 159.1 206 48.1
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 7.0e-36 154.8 202 43.1
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 9.1e-36 154.5 214 45.3
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.0e-35 153.3 208 43.8
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 2.7e-35 152.9 208 43.8
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 3.5e-35 152.5 208 41.3
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 5.9e-35 151.8 203 43.8
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 7.7e-35 151.4 205 42.4
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.0e-34 151.0 196 42.3
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 1.0e-34 151.0 213 45.1
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 1.3e-34 150.6 207 42.0
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.3e-34 150.6 205 41.0
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 1.7e-34 150.2 197 44.2
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 2.9e-34 149.4 212 44.3
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.9e-34 149.4 205 42.0
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 3.8e-34 149.1 205 44.4
arahy.Tifrunner.gnm1.ann1.HEPM80 Arachis hypogaea HOM05D004800 ORTHO05D005842 6.5e-34 148.3 82 90.2
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 6.5e-34 148.3 196 40.3
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 7.2e-33 144.8 196 42.3
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 1.6e-32 143.7 208 42.3
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 4.7e-32 142.1 197 42.1
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 8.0e-32 141.4 207 40.6
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 8.0e-32 141.4 204 42.2
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 8.0e-32 141.4 196 40.8
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 8.0e-32 141.4 209 38.8
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 1.0e-31 141.0 197 41.1
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.0e-31 141.0 196 42.3
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 1.0e-31 141.0 209 38.3
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 1.4e-31 140.6 197 41.1
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.8e-31 140.2 205 41.0
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 1.8e-31 140.2 197 39.6
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 4.0e-31 139.0 204 39.7
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 5.2e-31 138.7 197 39.1
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 6.8e-31 138.3 204 38.7
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 8.9e-31 137.9 207 39.6
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 1.2e-30 137.5 204 41.2
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 1.5e-30 137.1 205 40.0
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 2.0e-30 136.7 200 42.5
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.0e-30 136.7 205 40.0
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 2.6e-30 136.3 205 40.5
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 2.6e-30 136.3 197 39.6
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 3.4e-30 136.0 203 38.4
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 3.4e-30 136.0 196 37.8
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 5.7e-30 135.2 197 39.6
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 9.8e-30 134.4 182 41.2
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.3e-29 134.0 197 39.6
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.3e-29 134.0 197 39.6
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 4.9e-29 132.1 179 40.8
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 8.3e-29 131.3 199 40.2
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 8.3e-29 131.3 206 36.4
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 1.4e-28 130.6 197 38.6
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 1.8e-28 130.2 188 39.4
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 2.4e-28 129.8 209 39.2
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 3.1e-28 129.4 196 37.8
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 3.1e-28 129.4 188 43.6
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 5.4e-28 128.6 194 37.1
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 7.0e-28 128.3 201 36.8
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 9.2e-28 127.9 182 41.2
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 2.0e-27 126.7 199 37.7
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 2.0e-27 126.7 207 37.2
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 2.7e-27 126.3 172 43.0
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 2.7e-27 126.3 193 40.9
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 5.9e-27 125.2 199 37.2
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 5.9e-27 125.2 196 37.2
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 7.8e-27 124.8 202 38.6
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 1.0e-26 124.4 199 39.7
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.0e-26 124.4 196 38.8
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.3e-26 124.0 196 38.8
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 2.3e-26 123.2 197 36.0
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 2.3e-26 123.2 197 36.0
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 2.3e-26 123.2 199 38.7
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 2.3e-26 123.2 207 33.3
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 2.9e-26 122.9 204 34.3
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 3.8e-26 122.5 196 36.2
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 3.8e-26 122.5 197 36.5
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 5.0e-26 122.1 213 39.0
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 6.6e-26 121.7 196 36.7
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 6.6e-26 121.7 200 37.5
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 8.6e-26 121.3 199 37.2
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 8.6e-26 121.3 204 34.8
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 1.1e-25 120.9 207 32.4
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 1.9e-25 120.2 200 37.0
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 1.9e-25 120.2 213 38.5
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 2.5e-25 119.8 196 36.2
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 3.3e-25 119.4 205 34.1
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 4.3e-25 119.0 204 38.2
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 4.3e-25 119.0 197 37.6
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 7.3e-25 118.2 218 33.5
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 1.6e-24 117.1 198 34.8
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 1.6e-24 117.1 204 33.3
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 2.1e-24 116.7 199 36.7
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 2.1e-24 116.7 199 35.7
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 2.8e-24 116.3 196 38.8
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 2.8e-24 116.3 196 38.8
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 3.6e-24 115.9 202 36.1
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 4.7e-24 115.5 197 33.5
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 6.1e-24 115.2 207 35.3
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 8.0e-24 114.8 210 32.4
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 8.0e-24 114.8 207 36.7
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 1.4e-23 114.0 136 46.3
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 1.8e-23 113.6 166 42.2
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 1.8e-23 113.6 208 32.7
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 3.0e-23 112.8 200 37.5
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 5.2e-23 112.1 211 33.6
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 6.8e-23 111.7 204 32.8
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 1.5e-22 110.5 199 33.2
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 2.0e-22 110.2 141 43.3
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 2.6e-22 109.8 187 36.4
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 4.4e-22 109.0 183 33.3
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 4.4e-22 109.0 223 33.2
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 4.4e-22 109.0 181 38.7
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 1.7e-21 107.1 223 33.2
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 3.7e-21 105.9 207 33.3
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 1.4e-20 104.0 198 34.3
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 3.2e-20 102.8 201 35.3
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 9.2e-20 101.3 201 32.8
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 6.0e-19 98.6 198 31.3
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 5.6e-17 92.0 172 33.7
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 4.0e-15 85.9 216 30.6
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 1.2e-14 84.3 85 51.8
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 9.8e-14 81.3 96 49.0
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 2.9e-13 79.7 195 30.3
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 8.3e-13 78.2 198 30.8
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 9.2e-12 74.7 131 35.1
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 4.6e-11 72.4 95 31.6
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 5.6e-09 65.5 134 30.6
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 4.7e-08 62.4 57 56.1
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 8.9e-07 58.2 119 32.8
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 1.2e-06 57.8 119 30.3
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 1.5e-06 57.4 156 28.8


User provided reference genes

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