Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 0.0e+00 1268.4 671 100.0
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 0.0e+00 1254.6 671 99.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.5e-257 892.9 664 75.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 4.9e-256 887.9 686 73.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.6e-254 882.9 679 73.3
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 9.6e-252 873.6 681 72.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 3.4e-249 865.1 682 71.8
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.4e-248 860.9 673 72.2
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 3.5e-246 855.1 679 70.5
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-244 849.4 672 72.0
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-244 849.4 672 72.0
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 9.6e-244 847.0 671 71.2
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 8.2e-243 844.0 671 70.9
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.2e-240 835.9 671 70.6
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 6.7e-221 771.2 619 65.8
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 5.7e-220 768.1 637 66.2
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.5e-212 743.4 678 62.4
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.2e-211 739.6 680 60.0
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 2.2e-211 739.6 610 64.3
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.4e-210 736.1 673 60.6
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 4.1e-210 735.3 637 61.4
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 5.3e-210 734.9 677 61.4
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.7e-208 729.9 673 59.6
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.2e-208 729.6 674 60.5
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.2e-206 723.8 678 60.5
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 3.6e-206 722.2 637 62.2
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.8e-205 719.9 678 60.3
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.8e-205 719.9 659 62.1
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.0e-204 716.5 655 61.4
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 5.7e-204 714.9 672 57.9
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 2.4e-202 709.5 677 60.3
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 8.5e-200 701.0 657 61.0
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.5e-199 698.4 677 58.9
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 9.4e-199 697.6 677 59.7
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-197 692.6 677 58.3
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.7e-195 686.8 682 56.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.7e-195 685.6 665 59.1
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 6.3e-195 684.9 667 57.4
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 6.6e-192 674.9 673 57.7
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 6.6e-192 674.9 667 57.4
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.4e-189 667.2 677 56.3
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 4.0e-189 665.6 678 56.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 2.6e-188 662.9 735 52.2
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 4.4e-188 662.1 668 56.6
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.3e-187 660.6 550 61.5
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.1e-186 657.5 617 57.7
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 4.1e-186 655.6 680 56.8
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 9.2e-186 654.4 671 55.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.2e-185 654.1 671 54.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.0e-185 653.3 674 55.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 7.8e-185 651.4 623 58.4
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.8e-185 651.4 623 58.4
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.7e-184 650.2 511 63.2
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 2.3e-184 649.8 680 53.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 5.0e-184 648.7 548 59.7
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.6e-184 647.9 667 55.8
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-183 647.1 503 63.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-183 647.1 503 63.8
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 4.3e-183 645.6 670 53.9
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 7.3e-183 644.8 679 52.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 9.5e-183 644.4 672 53.3
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.2e-182 644.0 680 55.3
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.2e-182 644.0 637 54.9
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 2.1e-182 643.3 686 54.2
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 4.7e-182 642.1 686 54.2
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.6e-180 636.3 668 55.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 9.8e-180 634.4 669 53.1
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.3e-179 634.0 671 55.3
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.7e-179 633.6 674 54.3
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.7e-179 633.6 666 54.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 3.7e-179 632.5 667 55.8
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-178 629.4 623 55.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 4.1e-178 629.0 516 61.6
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 9.2e-178 627.9 646 54.2
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 9.2e-178 627.9 678 53.2
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.2e-177 627.5 671 53.5
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.0e-177 626.7 641 54.0
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 6.6e-176 621.7 669 55.9
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.1e-175 620.9 670 53.1
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 2.5e-175 619.8 671 54.1
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 5.6e-175 618.6 689 52.2
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 7.3e-175 618.2 461 65.3
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.8e-174 616.3 680 53.7
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.6e-174 615.9 681 52.6
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.0e-173 612.5 554 58.7
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 3.7e-171 605.9 673 54.1
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 8.3e-171 604.7 662 50.3
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 7.0e-170 601.7 656 51.5
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 3.0e-168 596.3 665 51.0
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.5e-167 591.3 488 60.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.1e-166 590.1 663 50.8
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.7e-166 589.0 672 53.3
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 3.1e-165 586.3 667 53.5
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 3.1e-165 586.3 553 58.0
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 9.9e-164 581.3 652 54.6
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.8e-157 560.5 660 52.1
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 4.2e-154 549.3 658 49.7
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 3.9e-144 516.2 416 59.9
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.4e-138 497.7 666 50.2
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 3.0e-136 490.0 376 64.4
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 5.1e-128 462.6 374 61.0
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.8e-124 449.1 524 47.7
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 7.7e-116 422.2 555 42.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 7.9e-113 412.1 528 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 1.0e-112 411.8 556 41.4
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.1e-109 399.8 616 41.2
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 6.9e-109 399.1 571 40.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.3e-78 298.5 551 34.3
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.1e-77 295.4 683 30.5
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.3e-54 218.8 521 29.0
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 1.0e-43 182.6 544 25.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.7e-43 181.8 432 29.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 8.7e-27 126.3 98 61.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 8.7e-27 126.3 98 61.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 4.8e-25 120.6 98 59.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.6e-18 96.3 381 24.9


User provided reference genes

Program Settings