Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y6F8M2 Arachis hypogaea HOM05D000590 ORTHO05D009145 9.8e-272 939.5 463 100.0
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 2.0e-147 526.6 483 58.8
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 3.6e-141 505.8 485 57.1
Phvul.001G047700 Phaseolus vulgaris HOM05D000590 ORTHO05D009145 1.1e-121 441.0 479 52.6
VMungo0647G0757 Vigna mungo HOM05D000590 ORTHO05D009145 2.2e-101 373.6 712 36.7
Ca_13040_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 8.2e-93 345.1 355 54.9
Medtr1g012870 Medicago truncatula HOM05D000590 ORTHO05D009145 2.0e-91 340.5 379 50.9
arahy.Tifrunner.gnm1.ann1.P756VC Arachis hypogaea HOM05D000590 ORTHO05D009145 2.6e-86 323.6 160 95.6
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 3.7e-85 319.7 497 41.9
Ca_30354_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 2.2e-82 310.5 305 57.4
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 2.1e-80 303.9 482 41.1
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 2.3e-79 300.4 516 39.5
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 5.2e-79 299.3 492 40.4
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 1.0e-71 275.0 496 39.1
Atru.chr7.2494 Acer truncatum HOM05D000590 ORTHO05D009145 4.8e-69 266.2 450 38.7
TPR.G38859 Trifolium pratense HOM05D000590 ORTHO05D009145 4.5e-67 259.6 266 52.6
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 5.9e-67 259.2 509 36.5
GSVIVG01035925001 Vitis vinifera HOM05D000590 ORTHO05D009145 1.3e-66 258.1 495 36.6
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 6.5e-66 255.8 503 34.6
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 2.3e-63 247.3 489 36.0
Ciclev10010345m.g Citrus clementina HOM05D000590 ORTHO05D009145 4.0e-63 246.5 485 35.5
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 5.2e-63 246.1 524 33.8
RcHm_v2.0_Chr6g0297291 Rosa chinensis HOM05D000590 ORTHO05D009145 5.7e-62 242.7 563 33.0
FvH4_2g28350 Fragaria vesca HOM05D000590 ORTHO05D009145 4.9e-61 239.6 532 33.8
FAN27G0748 Fragaria x ananassa HOM05D000590 ORTHO05D009145 2.4e-60 237.3 547 33.3
FAN24G2365 Fragaria x ananassa HOM05D000590 ORTHO05D009145 5.4e-60 236.1 532 33.6
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 7.0e-60 235.7 477 35.6
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 2.0e-59 234.2 489 34.6
Lj5g0010657 Lotus japonicus HOM05D000590 ORTHO05D009145 1.0e-58 231.9 185 64.3
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 4.3e-57 226.5 480 35.4
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 2.8e-56 223.8 478 33.5
FAN20G2931 Fragaria x ananassa HOM05D000590 ORTHO05D009145 2.3e-55 220.7 536 32.6
CANSAT25G0126 Cannabis sativa HOM05D000590 ORTHO05D009145 2.9e-53 213.8 465 34.6
CSS0004481 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D009145 1.4e-52 211.5 513 32.7
COL.COLO4_18904 Corchorus olitorius HOM05D000590 ORTHO05D009145 1.3e-50 204.9 398 34.7
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 3.0e-50 203.8 482 33.0
Dinv18162 Davidia involucrata HOM05D000590 ORTHO05D009145 1.0e-47 195.3 518 31.1
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 1.8e-47 194.5 490 33.3
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 5.2e-47 193.0 445 33.7
Actinidia13216 Actinidia chinensis HOM05D000590 ORTHO05D009145 5.4e-44 183.0 456 32.2
Lj7A728T60 Lonicera japonica HOM05D000590 ORTHO05D009145 3.9e-42 176.8 297 37.4
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 1.1e-41 175.3 465 30.5
EL10Ac2g04159 Beta vulgaris HOM05D000590 ORTHO05D009145 8.9e-39 165.6 433 33.7
Lj5g0001427 Lotus japonicus HOM05D000590 ORTHO05D009145 2.0e-38 164.5 200 49.5
Hund04451 Selenicereus undatus HOM05D000590 ORTHO05D009145 3.4e-38 163.7 439 31.4
AUR62031566 Chenopodium quinoa HOM05D000590 ORTHO05D009145 1.9e-36 157.9 428 32.0
HanXRQChr01g0030621 Helianthus annuus HOM05D000590 ORTHO05D009145 2.4e-36 157.5 445 31.0
Cc08_g00250 Coffea canephora HOM05D000590 ORTHO05D009145 9.2e-36 155.6 461 30.6
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 1.6e-35 154.8 424 30.7
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 1.3e-34 151.8 490 28.8
Ah.10g035720 Amaranthus hybridus HOM05D000590 ORTHO05D009145 3.9e-34 150.2 267 37.8
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 3.1e-31 140.6 452 27.4
THA.LOC104815012 Tarenaya hassleriana HOM05D000590 ORTHO05D009145 8.9e-31 139.0 290 35.2
Sc06g0000480 Simmondsia chinensis HOM05D000590 ORTHO05D009145 2.6e-30 137.5 251 34.3
ECA248G0426 Erigeron canadensis HOM05D000590 ORTHO05D009145 1.1e-28 132.1 335 32.5
Lsat_1_v5_gn_1_43780 Lactuca sativa HOM05D000590 ORTHO05D009145 4.6e-27 126.7 399 29.6
Rhsim02G0205200 Rhododendron simsii HOM05D000590 ORTHO05D009145 5.1e-26 123.2 541 26.6
Nitab4.5_0002992g0010 Nicotiana tabacum HOM05D028555 ORTHO05D009145 1.1e-25 122.1 293 31.7
SEGI_06897 Sequoiadendron giganteum HOM05D000590 ORTHO05D009145 1.6e-24 118.2 524 26.3
Nitab4.5_0005958g0030 Nicotiana tabacum HOM05D000590 ORTHO05D009145 2.1e-24 117.9 284 31.3
ATR0767G168 Amborella trichopoda HOM05D000590 ORTHO05D009145 2.4e-23 114.4 469 27.1
SGA_v2.0_scaffold64G21984 Striga asiatica HOM05D000590 ORTHO05D009145 6.9e-23 112.8 466 28.5
SalBow4G1906 Salvia bowleyana HOM05D000590 ORTHO05D009145 1.4e-20 105.1 397 26.7
Mapoly0002s0198 Marchantia polymorpha HOM05D000590 ORTHO05D009145 9.6e-17 92.4 316 25.0
Duzib150G1205 Durio zibethinus HOM05D000590 ORTHO05D009145 1.5e-14 85.1 215 30.7
Pp3c1_28750 Physcomitrium patens HOM05D000590 ORTHO05D009145 2.0e-14 84.7 91 42.9
Actinidia22318 Actinidia chinensis HOM05D000590 ORTHO05D009145 2.6e-14 84.3 467 26.6
Pp3c14_19990 Physcomitrium patens HOM05D000590 ORTHO05D009145 7.6e-14 82.8 94 39.4
Pp3c2_10000 Physcomitrium patens HOM05D000590 ORTHO05D009145 2.9e-13 80.9 145 33.8
Zm00001eb104540 Zea mays HOM05D000590 ORTHO05D009145 8.4e-13 79.3 84 44.0
HPP92_000484 Vanilla planifolia HOM05D000590 ORTHO05D009145 2.4e-12 77.8 74 44.6
Gorai.001G035300 Gossypium raimondii HOM05D000590 ORTHO05D009145 6.7e-10 69.7 217 27.6
Sopen08g011870 Solanum pennellii HOM05D000590 ORTHO05D009145 3.3e-09 67.4 97 38.1


User provided reference genes

Program Settings