Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 2.6e-65 251.9 129 100.0
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 1.0e-53 213.4 116 92.2
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 6.6e-24 114.4 91 61.5
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 1.6e-22 109.8 83 66.3
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 2.8e-22 109.0 86 64.0
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 4.7e-22 108.2 106 54.7
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 3.0e-21 105.5 86 60.5
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 5.2e-21 104.8 102 54.9
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 8.9e-21 104.0 86 60.5
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 1.2e-20 103.6 86 59.3
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 7.5e-20 100.9 86 60.5
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 9.8e-20 100.5 86 60.5
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 2.4e-18 95.9 87 60.9
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 4.1e-18 95.1 87 60.9
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 5.4e-18 94.7 91 52.7
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 5.4e-18 94.7 82 58.5
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 7.0e-18 94.4 81 60.5
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 7.0e-18 94.4 82 58.5
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 7.0e-18 94.4 83 56.6
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 1.2e-17 93.6 90 58.9
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 2.7e-17 92.4 94 54.3
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 3.5e-17 92.0 109 49.5
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 4.6e-17 91.7 82 57.3
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 5.9e-17 91.3 89 56.2
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 7.8e-17 90.9 107 50.5
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 1.3e-16 90.1 82 57.3
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 1.3e-16 90.1 99 51.5
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 1.7e-16 89.7 80 56.2
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 1.7e-16 89.7 96 54.2
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 1.7e-16 89.7 92 54.3
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 2.3e-16 89.4 86 58.1
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 2.3e-16 89.4 81 55.6
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 3.0e-16 89.0 94 54.3
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 3.9e-16 88.6 91 52.7
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 3.9e-16 88.6 103 47.6
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 3.9e-16 88.6 91 53.8
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 3.9e-16 88.6 92 54.3
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 5.0e-16 88.2 80 56.2
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 5.0e-16 88.2 90 53.3
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 5.0e-16 88.2 80 56.2
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 5.0e-16 88.2 89 52.8
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 5.0e-16 88.2 103 47.6
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 5.0e-16 88.2 94 54.3
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 5.0e-16 88.2 94 54.3
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 6.6e-16 87.8 81 56.8
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 6.6e-16 87.8 79 58.2
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 8.6e-16 87.4 82 57.3
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 1.1e-15 87.0 112 48.2
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 1.5e-15 86.7 87 51.7
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 1.9e-15 86.3 79 55.7
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 1.9e-15 86.3 82 57.3
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 1.9e-15 86.3 89 51.7
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 1.9e-15 86.3 89 51.7
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 1.9e-15 86.3 86 52.3
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 1.9e-15 86.3 91 53.8
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 2.5e-15 85.9 94 51.1
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 4.3e-15 85.1 82 56.1
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 4.3e-15 85.1 82 54.9
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 4.3e-15 85.1 94 52.1
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 5.6e-15 84.7 124 43.5
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 5.6e-15 84.7 91 50.5
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 7.3e-15 84.3 82 56.1
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 7.3e-15 84.3 81 53.1
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 9.5e-15 84.0 102 46.1
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 9.5e-15 84.0 81 56.8
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 9.5e-15 84.0 85 51.8
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 9.5e-15 84.0 93 52.7
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 9.5e-15 84.0 81 50.6
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 1.2e-14 83.6 100 49.0
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 1.2e-14 83.6 99 49.5
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 1.2e-14 83.6 83 55.4
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 1.2e-14 83.6 85 54.1
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 1.2e-14 83.6 79 58.2
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 1.6e-14 83.2 79 57.0
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 1.6e-14 83.2 81 53.1
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.6e-14 83.2 82 56.1
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.6e-14 83.2 81 54.3
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 1.6e-14 83.2 79 58.2
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 2.1e-14 82.8 82 54.9
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 2.8e-14 82.4 124 42.7
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 2.8e-14 82.4 106 47.2
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 2.8e-14 82.4 89 48.3
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 3.6e-14 82.0 102 45.1
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 3.6e-14 82.0 102 45.1
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 3.6e-14 82.0 91 51.6
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 4.7e-14 81.6 100 49.0
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 4.7e-14 81.6 79 55.7
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 4.7e-14 81.6 79 55.7
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 4.7e-14 81.6 79 57.0
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 4.7e-14 81.6 81 54.3
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 6.2e-14 81.3 87 48.3
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 6.2e-14 81.3 96 52.1
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 6.2e-14 81.3 81 53.1
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 6.2e-14 81.3 81 54.3
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 6.2e-14 81.3 86 53.5
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 8.0e-14 80.9 102 46.1
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 8.0e-14 80.9 94 50.0
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 8.0e-14 80.9 102 47.1
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 8.0e-14 80.9 79 54.4
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 8.0e-14 80.9 100 47.0
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 2.3e-13 79.3 102 46.1
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 3.1e-13 79.0 90 48.9
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 4.0e-13 78.6 81 51.9
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 4.0e-13 78.6 79 55.7
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 5.2e-13 78.2 105 46.7
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 6.8e-13 77.8 79 54.4
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 8.9e-13 77.4 80 53.8
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 8.9e-13 77.4 79 54.4
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 8.9e-13 77.4 81 50.6
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 1.2e-12 77.0 79 54.4
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 1.2e-12 77.0 95 49.5
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 2.0e-12 76.3 81 51.9
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 5.8e-12 74.7 85 45.9
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 2.2e-11 72.8 89 47.2
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 6.4e-11 71.2 78 50.0
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 6.4e-11 71.2 83 49.4
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 1.1e-10 70.5 79 49.4
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 3.5e-09 65.5 77 46.8
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 7.8e-09 64.3 79 46.8
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 1.7e-08 63.2 80 43.8
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 6.6e-08 61.2 82 42.7
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 4.3e-07 58.5 71 47.9
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 4.3e-07 58.5 103 35.9


User provided reference genes

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