Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 1.3e-70 269.6 138 100.0
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 5.1e-67 257.7 138 96.4
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 1.1e-61 240.0 130 95.4
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 7.2e-53 210.7 114 96.5
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 3.1e-48 195.3 122 86.1
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 1.5e-45 186.4 110 87.3
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 7.2e-45 184.1 120 82.5
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.0e-43 178.7 120 82.5
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 4.4e-42 174.9 114 86.8
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 2.9e-30 135.6 100 71.0
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 3.8e-30 135.2 100 76.0
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 2.5e-29 132.5 100 74.0
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 9.5e-29 130.6 110 69.1
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 9.5e-29 130.6 89 78.7
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.2e-28 130.2 89 79.8
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 6.1e-28 127.9 89 78.7
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 5.7e-26 121.3 72 94.4
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 3.7e-25 118.6 116 58.6
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.3e-22 109.4 114 61.4
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 2.9e-22 109.0 83 71.1
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 5.0e-22 108.2 90 64.4
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 1.1e-21 107.1 116 57.8
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 2.5e-21 105.9 93 65.6
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 3.3e-21 105.5 82 69.5
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 1.6e-20 103.2 127 53.5
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 2.8e-20 102.4 91 64.8
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 3.6e-20 102.1 83 66.3
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.7e-20 101.7 86 67.4
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 4.7e-20 101.7 102 58.8
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 6.1e-20 101.3 86 67.4
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 6.1e-20 101.3 86 67.4
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 8.0e-20 100.9 86 65.1
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 1.0e-19 100.5 97 58.8
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.0e-19 100.5 95 61.1
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 1.4e-19 100.1 86 66.3
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.4e-19 100.1 86 66.3
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.4e-19 100.1 116 55.2
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 2.3e-19 99.4 88 65.9
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.3e-19 99.4 102 57.8
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 2.3e-19 99.4 81 65.4
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 2.3e-19 99.4 124 52.4
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 4.0e-19 98.6 119 52.9
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 4.0e-19 98.6 119 52.9
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 5.2e-19 98.2 86 64.0
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 5.2e-19 98.2 121 52.9
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 6.8e-19 97.8 82 64.6
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 8.9e-19 97.4 98 61.2
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 8.9e-19 97.4 93 64.5
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 8.9e-19 97.4 83 65.1
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 3.4e-18 95.5 91 61.5
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 4.4e-18 95.1 99 57.6
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 4.4e-18 95.1 82 63.4
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 4.4e-18 95.1 82 63.4
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 5.8e-18 94.7 84 63.1
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 7.5e-18 94.4 94 57.4
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 9.8e-18 94.0 111 55.0
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.7e-17 93.2 83 63.9
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 2.2e-17 92.8 84 60.7
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 2.9e-17 92.4 115 58.3
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 3.7e-17 92.0 82 62.2
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 8.3e-17 90.9 94 57.4
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 1.1e-16 90.5 139 43.9
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.1e-16 90.5 134 47.8
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 2.4e-16 89.4 100 56.0
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 3.2e-16 89.0 72 63.9
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 7.0e-16 87.8 117 48.7
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 9.2e-16 87.4 84 59.5
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 9.2e-16 87.4 97 57.7
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.2e-15 87.0 116 52.6
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 1.2e-15 87.0 85 61.2
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 4.6e-15 85.1 96 54.2
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 7.8e-15 84.3 53 83.0
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 1.0e-14 84.0 135 44.4
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 1.0e-14 84.0 82 58.5
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 1.3e-14 83.6 56 76.8
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 1.3e-14 83.6 56 76.8
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 1.3e-14 83.6 56 76.8
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 1.3e-14 83.6 52 82.7
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 1.7e-14 83.2 87 60.9
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 2.3e-14 82.8 116 50.0
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 2.3e-14 82.8 111 48.6
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 3.9e-14 82.0 52 82.7
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 3.9e-14 82.0 79 58.2
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 5.0e-14 81.6 87 59.8
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 5.0e-14 81.6 85 54.1
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 6.6e-14 81.3 87 59.8
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 6.6e-14 81.3 60 70.0
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 6.6e-14 81.3 93 53.8
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 8.6e-14 80.9 98 53.1
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 1.5e-13 80.1 93 52.7
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 1.5e-13 80.1 93 51.6
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 4.3e-13 78.6 60 70.0
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 4.3e-13 78.6 53 77.4
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 4.3e-13 78.6 108 49.1
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 4.3e-13 78.6 90 50.0
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 7.3e-13 77.8 56 71.4
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 9.5e-13 77.4 84 56.0
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 2.1e-12 76.3 53 73.6
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 2.8e-12 75.9 81 55.6
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 4.7e-12 75.1 109 41.3
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 8.1e-12 74.3 89 52.8
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 1.1e-11 73.9 93 49.5
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 3.1e-11 72.4 53 69.8
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 8.9e-11 70.9 71 60.6
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 1.2e-10 70.5 98 45.9
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 7.5e-10 67.8 105 47.6
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 7.5e-10 67.8 74 54.1
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 9.8e-10 67.4 41 80.5
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 8.3e-09 64.3 78 48.7
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 3.2e-08 62.4 110 40.9
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 3.2e-08 62.4 64 57.8
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 7.1e-08 61.2 37 78.4
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 3.5e-07 58.9 53 56.6
VMungo0647G1967 Vigna mungo HOM05D006376 ORTHO05D008046 7.8e-07 57.8 39 82.1
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.0e-06 55.8 47 59.6
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 6.6e-06 54.7 83 37.3


User provided reference genes

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