Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-131 472.6 266 100.0
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 5.9e-128 461.1 266 97.7
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 2.8e-69 266.2 269 59.9
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 8.1e-69 264.6 267 59.9
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 9.0e-68 261.2 269 58.4
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 2.2e-66 256.5 270 60.7
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 6.4e-66 255.0 267 60.7
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 1.9e-65 253.4 261 59.4
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 4.2e-65 252.3 266 63.5
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 3.5e-64 249.2 268 60.8
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 5.1e-63 245.4 269 55.8
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 6.6e-63 245.0 269 60.2
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 1.9e-62 243.4 265 60.4
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 5.6e-62 241.9 288 52.4
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 2.8e-61 239.6 267 55.1
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 3.1e-60 236.1 273 52.7
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.5e-59 233.8 267 54.7
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 4.5e-59 232.3 263 58.9
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.9e-57 226.9 268 57.1
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 1.6e-56 223.8 275 53.1
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 4.6e-56 222.2 267 55.8
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 1.8e-55 220.3 270 54.8
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 5.1e-55 218.8 263 52.1
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 5.6e-54 215.3 268 51.1
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 9.6e-54 214.5 267 51.3
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 1.3e-53 214.2 257 54.9
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 2.8e-53 213.0 272 54.4
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 1.1e-52 211.1 265 54.3
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 4.0e-52 209.1 272 51.1
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 1.2e-51 207.6 269 55.0
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 1.2e-51 207.6 259 51.4
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 2.6e-51 206.5 268 53.7
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 7.6e-51 204.9 267 49.8
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 2.2e-50 203.4 267 47.6
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 3.8e-50 202.6 256 53.1
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 1.1e-49 201.1 271 51.3
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.1e-49 201.1 268 49.6
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 1.9e-49 200.3 266 49.6
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 1.9e-49 200.3 263 51.0
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 2.4e-49 199.9 268 50.4
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.4e-49 199.9 272 50.4
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.5e-49 198.7 274 49.3
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 7.1e-49 198.4 267 50.2
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 9.3e-49 198.0 272 50.0
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.6e-48 197.2 266 50.0
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 2.7e-48 196.4 275 52.4
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 6.0e-48 195.3 265 52.8
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 1.0e-47 194.5 169 62.1
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.8e-47 193.7 289 49.5
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 1.8e-47 193.7 261 54.4
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.3e-47 193.4 268 48.5
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 2.3e-47 193.4 278 52.2
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 6.7e-47 191.8 257 54.5
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 6.7e-47 191.8 264 47.7
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 8.7e-47 191.4 267 50.6
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 1.1e-46 191.0 257 46.7
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.1e-46 191.0 259 54.1
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.5e-46 190.7 268 47.8
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.5e-46 190.7 264 47.7
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 1.5e-46 190.7 255 49.4
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 1.5e-46 190.7 253 51.4
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 1.9e-46 190.3 267 49.1
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 1.9e-46 190.3 267 49.1
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 3.3e-46 189.5 264 47.3
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 4.3e-46 189.1 262 49.6
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 5.6e-46 188.7 254 53.1
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 5.6e-46 188.7 181 53.6
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 9.6e-46 188.0 266 50.0
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 1.3e-45 187.6 274 47.8
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 1.6e-45 187.2 259 49.0
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 2.1e-45 186.8 331 45.6
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 2.8e-45 186.4 253 51.4
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 3.7e-45 186.0 249 50.2
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 4.8e-45 185.7 265 48.7
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 4.8e-45 185.7 273 49.5
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 6.2e-45 185.3 259 51.7
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 8.2e-45 184.9 259 48.3
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.1e-44 184.5 265 48.7
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.8e-44 183.7 184 54.9
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 2.4e-44 183.3 255 47.5
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 2.4e-44 183.3 269 46.8
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 5.3e-44 182.2 258 47.3
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 6.9e-44 181.8 259 48.6
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 6.9e-44 181.8 259 48.6
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 1.2e-43 181.0 255 48.6
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 1.5e-43 180.6 253 46.2
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 2.0e-43 180.3 238 51.7
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 2.6e-43 179.9 262 47.7
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 2.6e-43 179.9 166 59.6
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.8e-43 178.7 269 45.0
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 1.0e-42 177.9 262 50.0
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 1.0e-42 177.9 261 49.4
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 1.3e-42 177.6 265 46.4
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 3.8e-42 176.0 287 47.4
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 8.4e-42 174.9 259 49.8
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 4.2e-41 172.6 261 47.9
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 4.2e-41 172.6 272 50.0
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 9.3e-41 171.4 227 48.9
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 9.3e-41 171.4 259 44.0
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.2e-40 171.0 294 41.5
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 4.6e-40 169.1 195 59.5
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 1.8e-39 167.2 166 53.6
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 1.8e-39 167.2 176 60.8
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 8.7e-39 164.9 269 46.5
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.5e-38 164.1 253 43.5
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 3.3e-38 162.9 269 45.7
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 1.3e-37 161.0 259 40.9
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 6.3e-37 158.7 259 45.9
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 6.3e-37 158.7 283 47.3
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 6.3e-37 158.7 143 62.2
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 5.3e-36 155.6 253 42.3
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 9.0e-36 154.8 258 44.2
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 1.3e-34 151.0 255 40.8
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 2.2e-34 150.2 247 42.9
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 3.8e-34 149.4 254 43.7
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 5.0e-34 149.1 270 45.2
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 1.1e-33 147.9 269 39.0
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 1.9e-33 147.1 280 42.9
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 2.5e-33 146.7 175 52.0
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 2.5e-33 146.7 275 38.2
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 1.8e-31 140.6 260 40.8
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 6.7e-31 138.7 377 36.1
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 8.8e-31 138.3 255 42.7
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.3e-29 134.4 152 50.7
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.2e-29 133.7 362 35.4
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 1.2e-27 127.9 151 53.0
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 2.1e-24 117.1 143 49.7
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 3.9e-23 112.8 222 36.9
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 1.1e-22 111.3 133 45.9
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 3.3e-22 109.8 294 31.6
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.7e-21 107.5 195 38.5
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 2.6e-19 100.1 156 44.9
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 1.0e-18 98.2 132 53.8
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 5.0e-18 95.9 254 40.2
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 6.5e-18 95.5 151 41.7
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 8.5e-18 95.1 71 69.0
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 5.5e-17 92.4 153 35.3
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 1.6e-16 90.9 127 58.3
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 3.9e-15 86.3 128 57.0
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 2.0e-14 84.0 168 33.3
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 7.4e-14 82.0 168 35.1
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 6.3e-13 79.0 151 35.8
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.1e-12 78.2 256 34.0
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 2.5e-09 67.0 61 60.7
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 1.8e-07 60.8 47 57.4
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 1.8e-07 60.8 47 57.4


User provided reference genes

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