Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 2.2e-79 298.9 152 100.0
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.9e-70 269.2 160 89.4
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 9.7e-35 150.6 146 56.2
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.6e-29 133.3 135 56.3
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 8.8e-28 127.5 92 72.8
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 2.0e-27 126.3 104 67.3
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 2.6e-27 125.9 93 74.2
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 5.7e-27 124.8 89 74.2
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 7.5e-27 124.4 152 53.9
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.3e-26 123.6 106 64.2
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.8e-26 122.5 98 68.4
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 6.3e-26 121.3 92 69.6
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.4e-25 120.2 136 55.1
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.8e-25 119.8 85 76.5
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.8e-25 119.8 85 76.5
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.8e-25 119.8 93 72.0
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.4e-25 118.2 134 52.2
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.0e-25 117.9 134 52.2
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.6e-24 116.7 108 61.1
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 2.0e-24 116.3 141 54.6
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.7e-24 115.9 85 68.2
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.7e-24 115.9 85 68.2
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 3.5e-24 115.5 84 70.2
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.5e-24 115.2 134 51.5
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 4.5e-24 115.2 94 69.1
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.9e-24 114.8 108 60.2
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.9e-24 114.8 108 60.2
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 5.9e-24 114.8 87 71.3
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.3e-23 113.6 104 60.6
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.7e-23 113.2 84 72.6
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.7e-23 113.2 85 67.1
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.7e-23 113.2 111 58.6
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 3.8e-23 112.1 85 65.9
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 6.5e-23 111.3 88 67.0
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.1e-22 110.5 132 51.5
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.5e-22 110.2 87 67.8
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 1.5e-22 110.2 85 67.1
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.9e-22 109.8 92 60.9
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 3.2e-22 109.0 143 50.3
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 4.2e-22 108.6 95 69.5
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 4.2e-22 108.6 143 51.0
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 2.1e-21 106.3 87 65.5
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.8e-21 105.9 101 59.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 2.3e-20 102.8 101 57.4
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.0e-20 102.1 102 54.9
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 6.8e-20 101.3 98 57.1
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 8.8e-20 100.9 109 54.1
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 8.8e-20 100.9 109 54.1
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.2e-19 100.5 106 57.5
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 5.7e-19 98.2 99 58.6
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.1e-17 94.0 94 55.3
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.8e-17 93.2 92 59.8
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.8e-17 93.2 121 47.1
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.4e-17 92.8 115 46.1
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 3.1e-17 92.4 128 47.7
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.1e-17 92.0 90 60.0
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 5.4e-17 91.7 121 45.5
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 7.0e-17 91.3 86 62.8
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 7.0e-17 91.3 115 49.6
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.2e-16 90.5 81 60.5
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 1.2e-16 90.5 85 60.0
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 4.5e-16 88.6 93 52.7
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 7.8e-16 87.8 88 61.4
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.3e-15 86.3 73 64.4
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 2.9e-15 85.9 89 56.2
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 3.8e-15 85.5 86 57.0
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 5.0e-15 85.1 75 62.7
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 5.0e-15 85.1 75 62.7
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 8.6e-15 84.3 71 62.0
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 8.6e-15 84.3 72 63.9
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 8.6e-15 84.3 72 63.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 8.6e-15 84.3 79 58.2
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.5e-14 83.6 101 48.5
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 1.5e-14 83.6 139 43.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.9e-14 83.2 78 61.5
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.5e-14 82.8 72 62.5
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.3e-14 82.0 91 54.9
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 4.3e-14 82.0 91 54.9
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 4.3e-14 82.0 91 54.9
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.3e-14 82.0 91 54.9
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 9.5e-14 80.9 78 57.7
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.2e-13 80.5 89 53.9
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.6e-13 80.1 123 43.1
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 4.7e-13 78.6 67 64.2
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 6.1e-13 78.2 87 50.6
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 6.1e-13 78.2 79 55.7
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 8.0e-13 77.8 79 55.7
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 3.0e-12 75.9 72 58.3
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 3.0e-12 75.9 72 58.3
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.0e-12 75.9 73 57.5
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 4.0e-12 75.5 80 56.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 6.8e-12 74.7 78 55.1
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.2e-11 73.9 72 55.6
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.5e-11 73.6 83 55.4
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.0e-11 73.2 100 50.0
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.6e-11 72.8 72 55.6
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.6e-11 72.8 72 55.6
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 3.4e-11 72.4 93 48.4
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.4e-11 72.4 77 55.8
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 4.4e-11 72.0 116 43.1
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.7e-11 71.6 79 54.4
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.7e-10 70.1 91 47.3
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 4.1e-09 65.5 75 45.3


User provided reference genes

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