Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y2B821 Arachis hypogaea HOM05D007005 ORTHO05D008799 4.0e-40 167.5 79 100.0
arahy.Tifrunner.gnm1.ann1.BVC6L3 Arachis hypogaea HOM05D007005 ORTHO05D008799 4.6e-36 154.1 75 96.0
arahy.Tifrunner.gnm1.ann1.T1PXLY Arachis hypogaea HOM05D007005 ORTHO05D008799 2.3e-35 151.8 75 94.7
Glyma.07G149300 Glycine max HOM05D007005 ORTHO05D008799 2.0e-31 138.7 75 85.3
Lalb_Chr19g0124511 Lupinus albus HOM05D007005 ORTHO05D008799 1.4e-29 132.5 75 81.3
Psat3g129840 Pisum sativum HOM05D007005 ORTHO05D008799 7.1e-29 130.2 75 74.7
Medtr7g068310 Medicago truncatula HOM05D007005 ORTHO05D008799 1.3e-27 125.9 75 74.7
Glyma.18G200200 Glycine max HOM05D007005 ORTHO05D008799 2.5e-26 121.7 75 76.0
VMungo1383G2262 Vigna mungo HOM05D007005 ORTHO05D008799 2.8e-25 118.2 76 75.0
Ca_07634_v3 Cicer arietinum L. HOM05D007005 ORTHO05D008799 2.4e-24 115.2 73 72.6
Thecc.05G016700 Theobroma cacao HOM05D007005 ORTHO05D008799 1.5e-23 112.5 77 66.2
QL07p035783 Quercus lobata HOM05D007005 ORTHO05D008799 3.8e-22 107.8 75 66.7
Dinv23100 Davidia involucrata HOM05D007005 ORTHO05D008799 6.4e-22 107.1 75 66.7
Haze_20998 Corylus avellana HOM05D007005 ORTHO05D008799 8.4e-22 106.7 75 64.0
CiPaw.09G208900 Carya illinoinensis HOM05D007005 ORTHO05D008799 7.1e-21 103.6 76 67.1
Duzib093G0110 Durio zibethinus HOM05D007005 ORTHO05D008799 1.2e-20 102.8 78 62.8
TAR623G0543 Trochodendron aralioides HOM05D007005 ORTHO05D008799 1.2e-20 102.8 75 66.7
Atru.chr8.2235 Acer truncatum HOM05D007005 ORTHO05D008799 2.7e-20 101.7 75 62.7
GSVIVG01033964001 Vitis vinifera HOM05D007005 ORTHO05D008799 2.7e-20 101.7 75 64.0
Sed0008022 Sechium edule HOM05D007005 ORTHO05D008799 4.6e-20 100.9 77 54.5
TWI77G0287 Tripterygium wilfordii HOM05D007005 ORTHO05D008799 6.0e-20 100.5 75 61.3
Ciclev10013484m.g Citrus clementina HOM05D007005 ORTHO05D008799 7.8e-20 100.1 75 58.7
CARHR211870 Cardamine hirsuta HOM05D007005 ORTHO05D008799 1.0e-19 99.8 76 60.5
Manes.09G104000 Manihot esculenta HOM05D007005 ORTHO05D008799 1.3e-19 99.4 75 61.3
MBI14_g31684_MAGBIO Magnolia biondii HOM05D007005 ORTHO05D008799 1.7e-19 99.0 77 62.3
Peaxi162Scf00141g00921 Petunia axillaris HOM05D007005 ORTHO05D008799 1.7e-19 99.0 77 57.1
Solyc09g005230.3 Solanum lycopersicum HOM05D007005 ORTHO05D008799 1.7e-19 99.0 77 59.7
PGSC0003DMG400011791 Solanum tuberosum HOM05D007005 ORTHO05D008799 1.7e-19 99.0 77 59.7
Gorai.012G113400 Gossypium raimondii HOM05D007005 ORTHO05D008799 3.9e-19 97.8 83 56.6
RcHm_v2.0_Chr3g0463211 Rosa chinensis HOM05D007005 ORTHO05D008799 5.1e-19 97.4 75 61.3
Gohir.D04G129900 Gossypium hirsutum HOM05D007005 ORTHO05D008799 8.7e-19 96.7 86 54.7
THA.LOC104823299 Tarenaya hassleriana HOM05D007005 ORTHO05D008799 8.7e-19 96.7 75 58.7
Sabra06G0076600 Salix brachista HOM05D007005 ORTHO05D008799 1.1e-18 96.3 75 58.7
COL.COLO4_14541 Corchorus olitorius HOM05D007005 ORTHO05D004733 1.5e-18 95.9 77 57.1
Prupe.6G276600 Prunus persica HOM05D007005 ORTHO05D008799 1.5e-18 95.9 75 56.0
PSO339G1757 Papaver somniferum HOM05D007005 ORTHO05D008799 2.5e-18 95.1 75 60.0
HanXRQChr11g0331611 Helianthus annuus HOM05D007005 ORTHO05D008799 4.3e-18 94.4 75 60.0
Potri.006G099700 Populus trichocarpa HOM05D007005 ORTHO05D008799 4.3e-18 94.4 76 59.2
vmacro20260 Vaccinium macrocarpon HOM05D007005 ORTHO05D008799 4.3e-18 94.4 75 57.3
Actinidia11591 Actinidia chinensis HOM05D007005 ORTHO05D008799 5.6e-18 94.0 75 58.7
PSO384G0643 Papaver somniferum HOM05D007005 ORTHO05D008799 5.6e-18 94.0 75 58.7
MELO3C003296.2 Cucumis melo HOM05D007005 ORTHO05D008799 7.3e-18 93.6 77 51.9
Lsat_1_v5_gn_8_102220 Lactuca sativa HOM05D007005 ORTHO05D008799 7.3e-18 93.6 75 61.3
CsaV3_4G026230 Cucumis sativus L. HOM05D007005 ORTHO05D008799 9.6e-18 93.2 77 51.9
AT5G01510 Arabidopsis thaliana HOM05D007005 ORTHO05D008799 1.3e-17 92.8 76 56.6
Migut.J00176 Erythranthe guttata HOM05D007005 ORTHO05D008799 4.8e-17 90.9 77 58.4
FvH4_6g11500 Fragaria vesca HOM05D007005 ORTHO05D008799 4.8e-17 90.9 75 53.3
FAN14G1027 Fragaria x ananassa HOM05D007005 ORTHO05D008799 4.8e-17 90.9 75 53.3
FAN14G1400 Fragaria x ananassa HOM05D007005 ORTHO05D008799 4.8e-17 90.9 75 53.3
ECA236G2421 Erigeron canadensis HOM05D007005 ORTHO05D008799 6.2e-17 90.5 75 61.3
FAN09G3623 Fragaria x ananassa HOM05D007005 ORTHO05D008799 6.2e-17 90.5 75 53.3
Nitab4.5_0000335g0230 Nicotiana tabacum HOM05D007005 ORTHO05D008799 8.1e-17 90.1 75 56.0
Cpa.g.sc11.163 Carica papaya HOM05D007005 ORTHO05D008799 1.1e-16 89.7 76 56.6
Thhalv10013293m.g Eutrema salsugineum HOM05D007005 ORTHO05D008799 1.4e-16 89.4 76 52.6
Aa31LG1G23130 Aethionema arabicum HOM05D007005 ORTHO05D008799 1.8e-16 89.0 76 55.3
DCAR_015423 Daucus carota HOM05D007005 ORTHO05D008799 1.8e-16 89.0 75 54.7
FAN05G3292 Fragaria x ananassa HOM05D007005 ORTHO05D008799 1.8e-16 89.0 74 52.7
FAN05G3789 Fragaria x ananassa HOM05D007005 ORTHO05D008799 1.8e-16 89.0 74 52.7
CDE02G1196 Ceratophyllum demersum HOM05D007005 ORTHO05D008799 3.1e-16 88.2 75 53.3
ClCG04G007040 Citrullus lanatus HOM05D007005 ORTHO05D008799 3.1e-16 88.2 74 51.4
Nitab4.5_0000511g0110 Nicotiana tabacum HOM05D007005 ORTHO05D008799 5.3e-16 87.4 75 56.0
Sopen09g001210 Solanum pennellii HOM05D007005 ORTHO05D008799 5.3e-16 87.4 72 56.9
unitig_8.g3230 Utricularia gibba HOM05D007005 ORTHO05D008799 5.3e-16 87.4 77 54.5
EL10Ac5g12569 Beta vulgaris HOM05D007005 ORTHO05D008799 6.9e-16 87.0 75 56.0
AL6G10540 Arabidopsis lyrata HOM05D007005 ORTHO05D008799 1.5e-15 85.9 77 54.5
Rhsim05G0214600 Rhododendron simsii HOM05D007005 ORTHO05D008799 1.5e-15 85.9 61 63.9
Sp6g40790 Schrenkiella parvula HOM05D007005 ORTHO05D008799 1.5e-15 85.9 77 55.8
BcaB01g06231 Brassica carinata HOM05D007005 ORTHO05D008799 2.0e-15 85.5 77 51.9
Eucgr.A00504 Eucalyptus grandis HOM05D007005 ORTHO05D008799 4.5e-15 84.3 75 53.3
SGA_v2.0_scaffold85G26741 Striga asiatica HOM05D007005 ORTHO05D008799 4.5e-15 84.3 90 51.1
AUR62030448 Chenopodium quinoa HOM05D007005 ORTHO05D008799 7.6e-15 83.6 75 54.7
AUR62010465 Chenopodium quinoa HOM05D007005 ORTHO05D008799 9.9e-15 83.2 75 54.7
Lj3A954T63 Lonicera japonica HOM05D007005 ORTHO05D008799 1.3e-14 82.8 88 51.1
Carub.0006s0032 Capsella rubella HOM05D007005 ORTHO05D008799 1.7e-14 82.4 70 52.9
Lsat_1_v5_gn_3_30860 Lactuca sativa HOM05D007005 ORTHO05D008799 2.2e-14 82.0 41 82.9
A03p00280 Brassica napus HOM05D007005 ORTHO05D008799 2.9e-14 81.6 77 54.5
BraA03t09419Z Brassica rapa HOM05D007005 ORTHO05D008799 2.9e-14 81.6 77 54.5
FAN02G1380 Fragaria x ananassa HOM05D007005 ORTHO05D008799 2.9e-14 81.6 75 56.0
Ah.02g115880 Amaranthus hybridus HOM05D007005 ORTHO05D008799 6.4e-14 80.5 75 52.0
Hund11016 Selenicereus undatus HOM05D007005 ORTHO05D008799 1.1e-13 79.7 75 50.7
C03p00450 Brassica napus HOM05D007005 ORTHO05D008799 1.4e-13 79.3 79 48.1
HPP92_005562 Vanilla planifolia HOM05D007005 ORTHO05D008799 2.4e-13 78.6 75 52.0
Os01g0141600 Oryza sativa ssp. japonica HOM05D007005 ORTHO05D008799 4.2e-13 77.8 75 53.3
BcaB01g06100 Brassica carinata HOM05D007005 ORTHO05D008799 5.4e-13 77.4 64 56.2
BolC3t12610H Brassica oleracea HOM05D007005 ORTHO05D008799 5.4e-13 77.4 64 56.2
Sc01g0006480 Simmondsia chinensis HOM05D007005 ORTHO05D008799 5.4e-13 77.4 75 46.7
SalBow5G0518 Salvia bowleyana HOM05D007005 ORTHO05D008799 2.7e-12 75.1 87 47.1
SEGI_37921 Sequoiadendron giganteum HOM05D007005 ORTHO05D008799 1.3e-11 72.8 38 81.6
Cc06_g01420 Coffea canephora HOM05D007005 ORTHO05D008799 3.0e-11 71.6 66 53.0
Gohir.A04G089800 Gossypium hirsutum HOM05D007005 ORTHO05D008799 1.1e-08 63.2 30 90.0
Mapoly0076s0023 Marchantia polymorpha HOM05D007005 ORTHO05D008799 1.8e-08 62.4 34 76.5
ATR0618G035 Amborella trichopoda HOM05D007005 ORTHO05D008799 5.3e-08 60.8 120 32.5
CBR_g48395 Chara braunii HOM05D002321 ORTHO05D008799 6.4e-06 53.9 37 54.1


User provided reference genes

Program Settings